RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Hist2h2beQ64524 126 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 8030423J24RikQ9CX45 142 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tomm7Q9D173 55 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gpr82Q8BZR0 328 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Lsm4Q9QXA5 137 aaKnown RBP13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Dopey1Q8BL99 2399 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ighv1-49A0A0A6YWX2 117 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Pradc1Q9D9N8 188 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ighv1-16A0A075B5U1 98 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 P01802 115 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Pcdh15Q99PJ1 1943 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ear14F6YUX7 155 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 P03980 138 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 P04945 108 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Jsrp1Q3MI48 332 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Edn3P48299 214 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Loxl1P97873 607 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tmem52Q9D702 196 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Plac1Q9JI83 173 aa13.34□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Fxyd7P59648 80 aa13.33□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Cend1Q9JKC6 149 aa13.33□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Abca4O35600 2310 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Pfn1P62962 140 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Nup210lQ9D2F7 1881 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm29289A0A087WPY7 166 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm4064A0A087WR82 380 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm10352B2RWR6 380 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm21693J3QK27 380 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 3110021N24RikJ3QMN2 152 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Rbmy1a1O35698 380 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm2564F6Z9S8 108 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm11020F6ZGD5 61 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Ccl19O70460 108 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Prr3Q811B5 190 aaKnown RBP13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 RhohQ9D3G9 191 aa13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Obsl1D3YYU8 1804 aaKnown RBP13.33□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Igkv4-71A0A0G2JEH0 117 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 CntfrO88507 372 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Dennd4aE9Q8V6 1869 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Tcrg-C1A0A075B5Z0 172 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Tcrg-C3L7N479 172 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 AmelxP63277 210 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Lhfpl1Q80SV1 220 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 H1fxQ80ZM5 188 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Pxt1Q8K459 51 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Igkv20-101-2A0A0G2JDU3 113 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Lyzl4Q9D925 145 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Trav6d-7A0A075B6B0 112 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Chac1Q8R3J5 223 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 TirapQ99JY1 241 aa13.32□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Ang2Q64438 145 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Dpm3Q9D1Q4 92 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Pgpep1Q9ESW8 209 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Ighv1-9A0A0A6YW37 117 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm867A0A1W2P7T4 151 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gpx1P11352 201 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Tex54G3UW99 86 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 P01741 114 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Fam110aQ8R184 296 aa13.31□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Bcl6bO88282 474 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 P01792 123 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm8251F6VUT6 1994 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Prok1Q14A28 105 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm10521E9PZK0 135 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Rspo3Q2TJ95 277 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Trav7-2Q5R1I3 112 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Cd300eQ8K249 196 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Ube2e2Q91W82 201 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Spry4Q9WTP2 300 aa13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Rif1Q6PR54 2419 aaKnown RBP13.3□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Cela2aP05208 271 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Wt1P22561 449 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 C730034F03RikQ8BGL5 111 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 LbhQ9CX60 105 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Kif26aQ52KG5 1881 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Defa-rs12P50716 91 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 P01789 122 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Rs1Q9Z1L4 224 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm33815A0A087WNV3 176 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 H2al1jA2BFR3 109 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Nit2Q9JHW2 276 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Tmem131O70472 1877 aa13.29□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Ssbp2Q9CYZ8 361 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Ighv5-8A0A075B676 92 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Hbb-bsA8DUK4 147 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Rpl35aO55142 110 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Hbb-b1P02088 147 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Cks1bP61025 79 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Hint1P70349 126 aaKnown RBP13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Pom121l2Q5SW25 972 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Minos1Q7TNS2 76 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gm28778A0A087WSK7 233 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Defa23Q5G866 93 aa13.28□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Wfdc9Q3UW41 83 aa13.27□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Defa-rs10Q64263 91 aa13.27□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 PmvkQ9D1G2 192 aa13.27□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Dazap2Q9DCP9 168 aa13.27□□□□□ -0.28
Ubfd1-201ENSMUST00000033158 Gata4Q08369 441 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Wipf2Q6PEV3 440 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Pear1Q8VIK5 1034 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms