RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
PSPC1-207ENST00000635251 C14orf177Q52M58 125 aa6.72□□□□□ -1.33
PSPC1-207ENST00000635251 PHF5AQ7RTV0 110 aaKnown RBP6.72□□□□□ -1.33
PSPC1-207ENST00000635251 CHTF8P0CG12 524 aa6.71□□□□□ -1.33
PSPC1-207ENST00000635251 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
PSPC1-207ENST00000635251 LCE6AA0A183 80 aa6.7□□□□□ -1.34
PSPC1-207ENST00000635251 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
PSPC1-207ENST00000635251 CMYA5Q8N3K9 4069 aa6.69□□□□□ -1.34
PSPC1-207ENST00000635251 CD164Q04900 197 aa6.69□□□□□ -1.34
PSPC1-207ENST00000635251 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
PSPC1-207ENST00000635251 KRTAP21-3Q3LHN1 58 aa6.69□□□□□ -1.34
PSPC1-207ENST00000635251 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
PSPC1-207ENST00000635251 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
PSPC1-207ENST00000635251 KRTAP11-1Q8IUC1 163 aa6.68□□□□□ -1.34
PSPC1-207ENST00000635251 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
PSPC1-207ENST00000635251 DNAH3Q8TD57 4116 aa6.67□□□□□ -1.34
PSPC1-207ENST00000635251 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
PSPC1-207ENST00000635251 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
PSPC1-207ENST00000635251 B9D2Q9BPU9 175 aa6.66□□□□□ -1.34
PSPC1-207ENST00000635251 H3BS24 57 aa6.65□□□□□ -1.34
PSPC1-207ENST00000635251 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.34
PSPC1-207ENST00000635251 H0Y9J4 135 aa6.65□□□□□ -1.35
PSPC1-207ENST00000635251 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.35
PSPC1-207ENST00000635251 SPRR1BP22528 89 aa6.64□□□□□ -1.35
PSPC1-207ENST00000635251 MP68P56378 58 aa6.64□□□□□ -1.35
PSPC1-207ENST00000635251 DNHD1Q96M86 4753 aa6.63□□□□□ -1.35
PSPC1-207ENST00000635251 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
PSPC1-207ENST00000635251 HUWE1Q7Z6Z7 4374 aaKnown RBP6.63□□□□□ -1.35
PSPC1-207ENST00000635251 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
PSPC1-207ENST00000635251 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
PSPC1-207ENST00000635251 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
PSPC1-207ENST00000635251 NBDYA0A0U1RRE5 68 aa6.61□□□□□ -1.35
PSPC1-207ENST00000635251 hDV103S1A0JD37 113 aa6.61□□□□□ -1.35
PSPC1-207ENST00000635251 PRR4Q16378 134 aa6.61□□□□□ -1.35
PSPC1-207ENST00000635251 PRR15Q8IV56 129 aa6.61□□□□□ -1.35
PSPC1-207ENST00000635251 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
PSPC1-207ENST00000635251 NDUFB1O75438 58 aa6.6□□□□□ -1.35
PSPC1-207ENST00000635251 A8MWP4 228 aa6.6□□□□□ -1.35
PSPC1-207ENST00000635251 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
PSPC1-207ENST00000635251 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
PSPC1-207ENST00000635251 PANO1I0J062 215 aa6.59□□□□□ -1.35
PSPC1-207ENST00000635251 MDFIQ99750 246 aa6.59□□□□□ -1.35
PSPC1-207ENST00000635251 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.36
PSPC1-207ENST00000635251 NBEAL1Q6ZS30 2694 aa6.58□□□□□ -1.36
PSPC1-207ENST00000635251 H0Y9P7 68 aa6.57□□□□□ -1.36
PSPC1-207ENST00000635251 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
PSPC1-207ENST00000635251 IGLV9-49A0A0B4J1Y8 123 aa6.57□□□□□ -1.36
PSPC1-207ENST00000635251 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
PSPC1-207ENST00000635251 NUPR2A6NF83 97 aa6.57□□□□□ -1.36
PSPC1-207ENST00000635251 CYP4F30PQ9H0H9 118 aa6.56□□□□□ -1.36
PSPC1-207ENST00000635251 Q6ZRN7 208 aaPredicted RBP6.56□□□□□ -1.36
PSPC1-207ENST00000635251 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
PSPC1-207ENST00000635251 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
PSPC1-207ENST00000635251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
PSPC1-207ENST00000635251 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
PSPC1-207ENST00000635251 H3BPC8 53 aa6.54□□□□□ -1.36
PSPC1-207ENST00000635251 SPACA4Q8TDM5 124 aa6.53□□□□□ -1.36
PSPC1-207ENST00000635251 MMP24-AS1A0A0U1RRL7 71 aa6.52□□□□□ -1.37
PSPC1-207ENST00000635251 LYSTQ99698 3801 aa6.51□□□□□ -1.37
PSPC1-207ENST00000635251 Q1T7F1 81 aa6.51□□□□□ -1.37
PSPC1-207ENST00000635251 DNAH9Q9NYC9 4486 aa6.51□□□□□ -1.37
PSPC1-207ENST00000635251 A0A087WTM6 91 aa6.5□□□□□ -1.37
PSPC1-207ENST00000635251 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
PSPC1-207ENST00000635251 PRR26Q8N8Z3 221 aa6.48□□□□□ -1.37
PSPC1-207ENST00000635251 SPANXA2-OT1Q8N9U9 137 aa6.48□□□□□ -1.37
PSPC1-207ENST00000635251 Q96NJ1 140 aa6.48□□□□□ -1.37
PSPC1-207ENST00000635251 MGAM2Q2M2H8 2515 aa6.48□□□□□ -1.37
PSPC1-207ENST00000635251 STAB2Q8WWQ8 2551 aa6.48□□□□□ -1.37
PSPC1-207ENST00000635251 PSPHP1O15172 72 aa6.47□□□□□ -1.37
PSPC1-207ENST00000635251 RTL8CO15255 209 aa6.47□□□□□ -1.37
PSPC1-207ENST00000635251 LINC00483Q53H64 154 aa6.47□□□□□ -1.37
PSPC1-207ENST00000635251 MOBPQ13875 183 aa6.47□□□□□ -1.37
PSPC1-207ENST00000635251 COL7A1Q02388 2944 aa6.47□□□□□ -1.37
PSPC1-207ENST00000635251 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.37
PSPC1-207ENST00000635251 CDK2AP2O75956 126 aa6.46□□□□□ -1.38
PSPC1-207ENST00000635251 C8orf17Q9NRJ1 99 aa6.46□□□□□ -1.38
PSPC1-207ENST00000635251 IGLV5-52A0A0A0MRZ9 124 aa6.45□□□□□ -1.38
PSPC1-207ENST00000635251 IGHV6-1A0A0B4J1U7 121 aa6.45□□□□□ -1.38
PSPC1-207ENST00000635251 ANAPC11Q9NYG5 84 aa6.45□□□□□ -1.38
PSPC1-207ENST00000635251 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
PSPC1-207ENST00000635251 NDUFS5O43920 106 aa6.45□□□□□ -1.38
PSPC1-207ENST00000635251 WWC2-AS2Q96NR7 200 aa6.45□□□□□ -1.38
PSPC1-207ENST00000635251 TP53AIP1Q9HCN2 124 aa6.45□□□□□ -1.38
PSPC1-207ENST00000635251 A0A1B0GVX0 72 aa6.43□□□□□ -1.38
PSPC1-207ENST00000635251 J3QL48 77 aa6.43□□□□□ -1.38
PSPC1-207ENST00000635251 ZNF861PO60384 105 aa6.43□□□□□ -1.38
PSPC1-207ENST00000635251 PCOTHQ58A44 107 aa6.43□□□□□ -1.38
PSPC1-207ENST00000635251 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
PSPC1-207ENST00000635251 PLAC8Q9NZF1 115 aa6.41□□□□□ -1.38
PSPC1-207ENST00000635251 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
PSPC1-207ENST00000635251 DNAH7Q8WXX0 4024 aa6.41□□□□□ -1.38
PSPC1-207ENST00000635251 A8MUN3 132 aa6.41□□□□□ -1.38
PSPC1-207ENST00000635251 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
PSPC1-207ENST00000635251 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
PSPC1-207ENST00000635251 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
PSPC1-207ENST00000635251 COA5Q86WW8 74 aa6.38□□□□□ -1.39
PSPC1-207ENST00000635251 DYNC2H1Q8NCM8 4307 aaKnown RBP6.38□□□□□ -1.39
PSPC1-207ENST00000635251 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
PSPC1-207ENST00000635251 Q6ZR54 194 aa6.38□□□□□ -1.39
PSPC1-207ENST00000635251 Q8N9P0 234 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms