RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 UBE2AP49459 152 aa9.75□□□□□ -0.85
PMS1-221ENST00000624204 PRLHP81277 87 aa9.75□□□□□ -0.85
PMS1-221ENST00000624204 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
PMS1-221ENST00000624204 C16orf90A8MZG2 172 aa9.73□□□□□ -0.85
PMS1-221ENST00000624204 H0Y9P7 68 aa9.73□□□□□ -0.85
PMS1-221ENST00000624204 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
PMS1-221ENST00000624204 CASC10Q5T4H9 136 aa9.71□□□□□ -0.85
PMS1-221ENST00000624204 IGLV1-50A0A075B6I6 118 aa9.7□□□□□ -0.86
PMS1-221ENST00000624204 LIMD2Q9BT23 127 aa9.7□□□□□ -0.86
PMS1-221ENST00000624204 H0Y9J4 135 aa9.7□□□□□ -0.86
PMS1-221ENST00000624204 KRTAP4-16G5E9R7 235 aaPredicted RBP9.69□□□□□ -0.86
PMS1-221ENST00000624204 KTN1-AS1Q86SY8 53 aa9.68□□□□□ -0.86
PMS1-221ENST00000624204 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
PMS1-221ENST00000624204 IGFL1Q6UW32 110 aa9.68□□□□□ -0.86
PMS1-221ENST00000624204 TENM4Q6N022 2769 aa9.67□□□□□ -0.86
PMS1-221ENST00000624204 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
PMS1-221ENST00000624204 SPAG11AQ6PDA7 123 aa9.66□□□□□ -0.86
PMS1-221ENST00000624204 RBM12B-AS1Q9P1G2 102 aa9.66□□□□□ -0.86
PMS1-221ENST00000624204 MGAM2Q2M2H8 2515 aa9.66□□□□□ -0.86
PMS1-221ENST00000624204 NDUFS5O43920 106 aa9.64□□□□□ -0.87
PMS1-221ENST00000624204 LCA10Q71F78 164 aa9.64□□□□□ -0.87
PMS1-221ENST00000624204 OXLD1Q5BKU9 147 aa9.64□□□□□ -0.87
PMS1-221ENST00000624204 SPRR1AP35321 89 aa9.63□□□□□ -0.87
PMS1-221ENST00000624204 KRTAP1-1Q07627 177 aa9.62□□□□□ -0.87
PMS1-221ENST00000624204 SPANXA2-OT1Q8N9U9 137 aa9.62□□□□□ -0.87
PMS1-221ENST00000624204 COA5Q86WW8 74 aa9.61□□□□□ -0.87
PMS1-221ENST00000624204 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
PMS1-221ENST00000624204 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
PMS1-221ENST00000624204 TENM2Q9NT68 2774 aa9.6□□□□□ -0.87
PMS1-221ENST00000624204 ATP11AUNQ6ZP68 121 aa9.6□□□□□ -0.87
PMS1-221ENST00000624204 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
PMS1-221ENST00000624204 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
PMS1-221ENST00000624204 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
PMS1-221ENST00000624204 PLA2G2DQ9UNK4 145 aa9.57□□□□□ -0.88
PMS1-221ENST00000624204 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
PMS1-221ENST00000624204 Q75L30 129 aa9.56□□□□□ -0.88
PMS1-221ENST00000624204 TLX1NBP0CAT3 122 aa9.56□□□□□ -0.88
PMS1-221ENST00000624204 CNBPP62633 177 aaKnown RBP9.56□□□□□ -0.88
PMS1-221ENST00000624204 H3BPC8 53 aa9.54□□□□□ -0.88
PMS1-221ENST00000624204 IGLV5-37A0A075B6J1 123 aa9.53□□□□□ -0.88
PMS1-221ENST00000624204 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
PMS1-221ENST00000624204 C9orf163Q8N9P6 203 aa9.53□□□□□ -0.88
PMS1-221ENST00000624204 LOC101927531A0A1B0GV80 90 aa9.52□□□□□ -0.89
PMS1-221ENST00000624204 H3BNG1 76 aa9.52□□□□□ -0.89
PMS1-221ENST00000624204 A6NN06 94 aa9.51□□□□□ -0.89
PMS1-221ENST00000624204 CHTF8P0CG12 524 aa9.5□□□□□ -0.89
PMS1-221ENST00000624204 A8MWP4 228 aa9.5□□□□□ -0.89
PMS1-221ENST00000624204 CDC42SE1Q9NRR8 79 aa9.5□□□□□ -0.89
PMS1-221ENST00000624204 IGLV9-49A0A0B4J1Y8 123 aa9.48□□□□□ -0.89
PMS1-221ENST00000624204 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
PMS1-221ENST00000624204 IGLV7-46A0A075B6I9 117 aa9.47□□□□□ -0.89
PMS1-221ENST00000624204 STAB2Q8WWQ8 2551 aa9.46□□□□□ -0.9
PMS1-221ENST00000624204 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
PMS1-221ENST00000624204 MOBPQ13875 183 aa9.46□□□□□ -0.9
PMS1-221ENST00000624204 PHF5AQ7RTV0 110 aaKnown RBP9.46□□□□□ -0.9
PMS1-221ENST00000624204 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
PMS1-221ENST00000624204 SPINK7P58062 85 aa9.44□□□□□ -0.9
PMS1-221ENST00000624204 DNAH10OSP0CZ25 163 aa9.43□□□□□ -0.9
PMS1-221ENST00000624204 IGHV6-1A0A0B4J1U7 121 aa9.43□□□□□ -0.9
PMS1-221ENST00000624204 LINC00472Q9H8W2 130 aa9.43□□□□□ -0.9
PMS1-221ENST00000624204 IGLV8-61A0A075B6I0 122 aa9.42□□□□□ -0.9
PMS1-221ENST00000624204 MMP24-AS1A0A0U1RRL7 71 aa9.41□□□□□ -0.9
PMS1-221ENST00000624204 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.9
PMS1-221ENST00000624204 SPINK6Q6UWN8 80 aa9.4□□□□□ -0.9
PMS1-221ENST00000624204 LINC01558Q9Y6Z2 57 aa9.4□□□□□ -0.91
PMS1-221ENST00000624204 PRR26Q8N8Z3 221 aa9.39□□□□□ -0.91
PMS1-221ENST00000624204 KMT2BQ9UMN6 2715 aaPredicted RBP9.37□□□□□ -0.91
PMS1-221ENST00000624204 KRTAP11-1Q8IUC1 163 aa9.35□□□□□ -0.91
PMS1-221ENST00000624204 ADM2Q7Z4H4 148 aa9.35□□□□□ -0.91
PMS1-221ENST00000624204 ANAPC11Q9NYG5 84 aa9.35□□□□□ -0.91
PMS1-221ENST00000624204 HRES1P13985 223 aa9.34□□□□□ -0.91
PMS1-221ENST00000624204 KRTAP10-11P60412 298 aa9.34□□□□□ -0.91
PMS1-221ENST00000624204 K7EIL1 84 aa9.34□□□□□ -0.91
PMS1-221ENST00000624204 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
PMS1-221ENST00000624204 TP53AIP1Q9HCN2 124 aa9.3□□□□□ -0.92
PMS1-221ENST00000624204 PLAC8Q9NZF1 115 aa9.29□□□□□ -0.92
PMS1-221ENST00000624204 ANK2Q01484 3957 aa9.28□□□□□ -0.92
PMS1-221ENST00000624204 LINC00313P59037 77 aa9.28□□□□□ -0.92
PMS1-221ENST00000624204 C8orf17Q9NRJ1 99 aa9.27□□□□□ -0.93
PMS1-221ENST00000624204 DNAH10Q8IVF4 4471 aa9.27□□□□□ -0.93
PMS1-221ENST00000624204 UBE2DNLQ8IWF7 75 aa9.25□□□□□ -0.93
PMS1-221ENST00000624204 C8orf87E5RJ46 101 aa9.25□□□□□ -0.93
PMS1-221ENST00000624204 A0A087X002 238 aa9.23□□□□□ -0.93
PMS1-221ENST00000624204 SPRR1BP22528 89 aa9.23□□□□□ -0.93
PMS1-221ENST00000624204 NOTCH2NLQ7Z3S9 236 aa9.23□□□□□ -0.93
PMS1-221ENST00000624204 Q6ZR54 194 aa9.22□□□□□ -0.93
PMS1-221ENST00000624204 LYSTQ99698 3801 aa9.22□□□□□ -0.93
PMS1-221ENST00000624204 MDFIQ99750 246 aa9.21□□□□□ -0.94
PMS1-221ENST00000624204 Q96NJ1 140 aa9.19□□□□□ -0.94
PMS1-221ENST00000624204 KRTAP1-5Q9BYS1 174 aa9.19□□□□□ -0.94
PMS1-221ENST00000624204 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
PMS1-221ENST00000624204 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
PMS1-221ENST00000624204 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
PMS1-221ENST00000624204 FLG2Q5D862 2391 aaPredicted RBP9.17□□□□□ -0.94
PMS1-221ENST00000624204 ASB16-AS1Q495Z4 193 aa9.15□□□□□ -0.94
PMS1-221ENST00000624204 PANO1I0J062 215 aa9.15□□□□□ -0.94
PMS1-221ENST00000624204 SPINK1P00995 79 aa9.1□□□□□ -0.95
PMS1-221ENST00000624204 ACYP2P14621 99 aa9.1□□□□□ -0.95
PMS1-221ENST00000624204 Q5W150 140 aa9.09□□□□□ -0.95
PMS1-221ENST00000624204 CIRBP-AS1Q8TBR5 109 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms