RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 PRR15LQ9BU68 103 aa10.34□□□□□ -0.75
RECQL4-209ENST00000617875 H0Y9P7 68 aa10.33□□□□□ -0.76
RECQL4-209ENST00000617875 PMAIP1Q13794 54 aa10.33□□□□□ -0.76
RECQL4-209ENST00000617875 BCE1O60756 84 aa10.33□□□□□ -0.76
RECQL4-209ENST00000617875 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
RECQL4-209ENST00000617875 C1orf64Q8NEQ6 169 aa10.32□□□□□ -0.76
RECQL4-209ENST00000617875 KCNQ1DNQ9H478 68 aa10.32□□□□□ -0.76
RECQL4-209ENST00000617875 ANAPC11Q9NYG5 84 aa10.32□□□□□ -0.76
RECQL4-209ENST00000617875 IGHV6-1A0A0B4J1U7 121 aa10.31□□□□□ -0.76
RECQL4-209ENST00000617875 K7EIL1 84 aa10.31□□□□□ -0.76
RECQL4-209ENST00000617875 A8MUN3 132 aa10.3□□□□□ -0.76
RECQL4-209ENST00000617875 EPM2AB3EWF7 344 aa10.3□□□□□ -0.76
RECQL4-209ENST00000617875 LY6G6CO95867 125 aa10.28□□□□□ -0.76
RECQL4-209ENST00000617875 H3BNG1 76 aa10.28□□□□□ -0.76
RECQL4-209ENST00000617875 OCR1Q9BZK8 76 aa10.27□□□□□ -0.76
RECQL4-209ENST00000617875 C14orf177Q52M58 125 aa10.26□□□□□ -0.77
RECQL4-209ENST00000617875 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
RECQL4-209ENST00000617875 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
RECQL4-209ENST00000617875 MDFIQ99750 246 aa10.24□□□□□ -0.77
RECQL4-209ENST00000617875 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
RECQL4-209ENST00000617875 MOBPQ13875 183 aa10.19□□□□□ -0.78
RECQL4-209ENST00000617875 DSCR10P59022 87 aa10.19□□□□□ -0.78
RECQL4-209ENST00000617875 KRTAP26-1Q6PEX3 210 aa10.18□□□□□ -0.78
RECQL4-209ENST00000617875 SPAG11AQ6PDA7 123 aa10.18□□□□□ -0.78
RECQL4-209ENST00000617875 C16orf90A8MZG2 172 aa10.17□□□□□ -0.78
RECQL4-209ENST00000617875 TRAV22A0A0B4J277 110 aa10.16□□□□□ -0.78
RECQL4-209ENST00000617875 IGLV5-48A0A075B6I7 105 aa10.15□□□□□ -0.78
RECQL4-209ENST00000617875 KRTAP1-5Q9BYS1 174 aa10.15□□□□□ -0.78
RECQL4-209ENST00000617875 SEC61GP60059 68 aa10.13□□□□□ -0.79
RECQL4-209ENST00000617875 TGP01266 2768 aa10.13□□□□□ -0.79
RECQL4-209ENST00000617875 CSMD3Q7Z407 3707 aa10.13□□□□□ -0.79
RECQL4-209ENST00000617875 AKAP9Q99996 3911 aa10.12□□□□□ -0.79
RECQL4-209ENST00000617875 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
RECQL4-209ENST00000617875 F8WDY8 70 aa10.1□□□□□ -0.79
RECQL4-209ENST00000617875 WIPF1O43516 503 aa10.09□□□□□ -0.79
RECQL4-209ENST00000617875 IGLV5-52A0A0A0MRZ9 124 aa10.09□□□□□ -0.79
RECQL4-209ENST00000617875 NBDYA0A0U1RRE5 68 aa10.08□□□□□ -0.8
RECQL4-209ENST00000617875 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
RECQL4-209ENST00000617875 PRR15Q8IV56 129 aa10.03□□□□□ -0.8
RECQL4-209ENST00000617875 TLX1NBP0CAT3 122 aa10.03□□□□□ -0.8
RECQL4-209ENST00000617875 NUPR2A6NF83 97 aa10.01□□□□□ -0.81
RECQL4-209ENST00000617875 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
RECQL4-209ENST00000617875 COA5Q86WW8 74 aa10□□□□□ -0.81
RECQL4-209ENST00000617875 A8MWP4 228 aa9.99□□□□□ -0.81
RECQL4-209ENST00000617875 RTL8CO15255 209 aa9.99□□□□□ -0.81
RECQL4-209ENST00000617875 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
RECQL4-209ENST00000617875 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.99□□□□□ -0.81
RECQL4-209ENST00000617875 A0A1B0GW54 56 aa9.98□□□□□ -0.81
RECQL4-209ENST00000617875 PANO1I0J062 215 aa9.98□□□□□ -0.81
RECQL4-209ENST00000617875 SPINK1P00995 79 aa9.98□□□□□ -0.81
RECQL4-209ENST00000617875 SPRR4Q96PI1 79 aa9.98□□□□□ -0.81
RECQL4-209ENST00000617875 C9orf163Q8N9P6 203 aa9.97□□□□□ -0.81
RECQL4-209ENST00000617875 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
RECQL4-209ENST00000617875 LIMD2Q9BT23 127 aa9.97□□□□□ -0.81
RECQL4-209ENST00000617875 DMBT1Q9UGM3 2413 aaPredicted RBP9.96□□□□□ -0.81
RECQL4-209ENST00000617875 A8MU10 97 aa9.95□□□□□ -0.82
RECQL4-209ENST00000617875 C1orf134Q5TEV5 83 aa9.95□□□□□ -0.82
RECQL4-209ENST00000617875 SPACA4Q8TDM5 124 aa9.94□□□□□ -0.82
RECQL4-209ENST00000617875 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
RECQL4-209ENST00000617875 PLA2G2DQ9UNK4 145 aa9.93□□□□□ -0.82
RECQL4-209ENST00000617875 ANK3Q12955 4377 aaKnown RBP9.93□□□□□ -0.82
RECQL4-209ENST00000617875 ZNF706Q9Y5V0 76 aaPredicted RBP9.92□□□□□ -0.82
RECQL4-209ENST00000617875 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
RECQL4-209ENST00000617875 IGKV2D-30A0A075B6S6 120 aa9.92□□□□□ -0.82
RECQL4-209ENST00000617875 IGKV2-30P06310 120 aa9.92□□□□□ -0.82
RECQL4-209ENST00000617875 SPRR1AP35321 89 aa9.92□□□□□ -0.82
RECQL4-209ENST00000617875 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
RECQL4-209ENST00000617875 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
RECQL4-209ENST00000617875 KRTAP4-16G5E9R7 235 aaPredicted RBP9.88□□□□□ -0.83
RECQL4-209ENST00000617875 TNP2Q05952 138 aa9.88□□□□□ -0.83
RECQL4-209ENST00000617875 PRR26Q8N8Z3 221 aa9.87□□□□□ -0.83
RECQL4-209ENST00000617875 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
RECQL4-209ENST00000617875 A0A087WTM6 91 aa9.86□□□□□ -0.83
RECQL4-209ENST00000617875 Q1T7F1 81 aa9.85□□□□□ -0.83
RECQL4-209ENST00000617875 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
RECQL4-209ENST00000617875 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
RECQL4-209ENST00000617875 Q5VV11 94 aa9.79□□□□□ -0.84
RECQL4-209ENST00000617875 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
RECQL4-209ENST00000617875 LOC101927531A0A1B0GV80 90 aa9.79□□□□□ -0.84
RECQL4-209ENST00000617875 H3BPC8 53 aa9.79□□□□□ -0.84
RECQL4-209ENST00000617875 FBN3Q75N90 2809 aa9.79□□□□□ -0.84
RECQL4-209ENST00000617875 CYP4F30PQ9H0H9 118 aa9.78□□□□□ -0.84
RECQL4-209ENST00000617875 TP53AIP1Q9HCN2 124 aa9.78□□□□□ -0.84
RECQL4-209ENST00000617875 ZNF861PO60384 105 aa9.76□□□□□ -0.85
RECQL4-209ENST00000617875 MMP24-AS1A0A0U1RRL7 71 aa9.75□□□□□ -0.85
RECQL4-209ENST00000617875 ZCCHC13Q8WW36 166 aaKnown RBP9.75□□□□□ -0.85
RECQL4-209ENST00000617875 A0A1B0GVX0 72 aa9.74□□□□□ -0.85
RECQL4-209ENST00000617875 CD164Q04900 197 aa9.74□□□□□ -0.85
RECQL4-209ENST00000617875 SMR3BP02814 79 aaPredicted RBP9.74□□□□□ -0.85
RECQL4-209ENST00000617875 LINC00472Q9H8W2 130 aa9.74□□□□□ -0.85
RECQL4-209ENST00000617875 A0A1B0GU69 56 aa9.72□□□□□ -0.85
RECQL4-209ENST00000617875 A0A087X002 238 aa9.7□□□□□ -0.86
RECQL4-209ENST00000617875 NOTCH2NLQ7Z3S9 236 aa9.7□□□□□ -0.86
RECQL4-209ENST00000617875 LINC00313P59037 77 aa9.7□□□□□ -0.86
RECQL4-209ENST00000617875 SPANXA2-OT1Q8N9U9 137 aa9.69□□□□□ -0.86
RECQL4-209ENST00000617875 ACYP2P14621 99 aa9.67□□□□□ -0.86
RECQL4-209ENST00000617875 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
RECQL4-209ENST00000617875 SPINK7P58062 85 aa9.66□□□□□ -0.86
RECQL4-209ENST00000617875 FLG2Q5D862 2391 aaPredicted RBP9.66□□□□□ -0.86
RECQL4-209ENST00000617875 ATP11AUNQ6ZP68 121 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms