RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 PRO0461Q9UI25 63 aa6.57□□□□□ -1.36
SMARCA1-205ENST00000617310 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 ZNF861PO60384 105 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 WIPF1O43516 503 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 Q6ZQT0 140 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 ERC2-IT1O76042 136 aa6.55□□□□□ -1.36
SMARCA1-205ENST00000617310 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
SMARCA1-205ENST00000617310 NDUFC1O43677 76 aa6.54□□□□□ -1.36
SMARCA1-205ENST00000617310 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
SMARCA1-205ENST00000617310 Q96NJ1 140 aa6.53□□□□□ -1.36
SMARCA1-205ENST00000617310 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
SMARCA1-205ENST00000617310 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
SMARCA1-205ENST00000617310 A6NED7 52 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 LINC00313P59037 77 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 LINC00336Q6ZUF6 198 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 Q8N377 158 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 TENM1Q9UKZ4 2725 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 CXCL6P80162 114 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 CNBPP62633 177 aaKnown RBP6.49□□□□□ -1.37
SMARCA1-205ENST00000617310 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
SMARCA1-205ENST00000617310 TRRAPQ9Y4A5 3859 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 A0A0U1RQV1 116 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 K7ERS5 55 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 K7EQZ3 153 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 DSCR10P59022 87 aa6.47□□□□□ -1.37
SMARCA1-205ENST00000617310 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
SMARCA1-205ENST00000617310 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
SMARCA1-205ENST00000617310 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 PSPHP1O15172 72 aa6.44□□□□□ -1.38
SMARCA1-205ENST00000617310 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
SMARCA1-205ENST00000617310 SSBP3-AS1Q7Z2R9 100 aa6.43□□□□□ -1.38
SMARCA1-205ENST00000617310 SPRR4Q96PI1 79 aa6.43□□□□□ -1.38
SMARCA1-205ENST00000617310 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
SMARCA1-205ENST00000617310 TRAV22A0A0B4J277 110 aa6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 VWFP04275 2813 aa6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
SMARCA1-205ENST00000617310 A8MWP4 228 aa6.4□□□□□ -1.38
SMARCA1-205ENST00000617310 TP53AIP1Q9HCN2 124 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 PLA2G2DQ9UNK4 145 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 V9GYY9 64 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 A0A1B0GW54 56 aa6.38□□□□□ -1.39
SMARCA1-205ENST00000617310 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
SMARCA1-205ENST00000617310 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
SMARCA1-205ENST00000617310 Q8NDZ9 215 aa6.37□□□□□ -1.39
SMARCA1-205ENST00000617310 SMIM26A0A096LP01 95 aa6.37□□□□□ -1.39
SMARCA1-205ENST00000617310 C8orf17Q9NRJ1 99 aa6.36□□□□□ -1.39
SMARCA1-205ENST00000617310 SPAG11AQ6PDA7 123 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
SMARCA1-205ENST00000617310 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
SMARCA1-205ENST00000617310 LCE6AA0A183 80 aa6.32□□□□□ -1.4
SMARCA1-205ENST00000617310 PDZD2O15018 2839 aa6.31□□□□□ -1.4
SMARCA1-205ENST00000617310 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 IGLV5-37A0A075B6J1 123 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 ANK2Q01484 3957 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 ACYP2P14621 99 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 A0A1B0GU69 56 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 PANO1I0J062 215 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 TGP01266 2768 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 PLAC8Q9NZF1 115 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
SMARCA1-205ENST00000617310 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
SMARCA1-205ENST00000617310 IGLV5-48A0A075B6I7 105 aa6.25□□□□□ -1.41
SMARCA1-205ENST00000617310 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
SMARCA1-205ENST00000617310 Q8N1X5 172 aa6.24□□□□□ -1.41
SMARCA1-205ENST00000617310 Q5VSD8 79 aa6.23□□□□□ -1.41
SMARCA1-205ENST00000617310 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
SMARCA1-205ENST00000617310 LYSTQ99698 3801 aa6.22□□□□□ -1.41
SMARCA1-205ENST00000617310 H3BPC8 53 aa6.21□□□□□ -1.41
SMARCA1-205ENST00000617310 Q6ZR54 194 aa6.19□□□□□ -1.42
SMARCA1-205ENST00000617310 SPRR1AP35321 89 aa6.18□□□□□ -1.42
SMARCA1-205ENST00000617310 Q6ZSA8 131 aa6.17□□□□□ -1.42
SMARCA1-205ENST00000617310 LINC01600Q96MT4 127 aa6.17□□□□□ -1.42
SMARCA1-205ENST00000617310 CMYA5Q8N3K9 4069 aa6.16□□□□□ -1.42
SMARCA1-205ENST00000617310 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
SMARCA1-205ENST00000617310 COA5Q86WW8 74 aa6.16□□□□□ -1.42
SMARCA1-205ENST00000617310 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
SMARCA1-205ENST00000617310 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
SMARCA1-205ENST00000617310 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
SMARCA1-205ENST00000617310 A8MUN3 132 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms