RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 K7EIL1 84 aa10.93□□□□□ -0.66
DDX1-207ENST00000617198 WFDC13Q8IUB5 93 aa10.93□□□□□ -0.66
DDX1-207ENST00000617198 HUWE1Q7Z6Z7 4374 aaKnown RBP10.92□□□□□ -0.66
DDX1-207ENST00000617198 C1orf64Q8NEQ6 169 aa10.92□□□□□ -0.66
DDX1-207ENST00000617198 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
DDX1-207ENST00000617198 BAHCC1Q9P281 2608 aa10.9□□□□□ -0.66
DDX1-207ENST00000617198 BRK1Q8WUW1 75 aa10.89□□□□□ -0.67
DDX1-207ENST00000617198 RPL37AP61513 92 aaKnown RBP10.89□□□□□ -0.67
DDX1-207ENST00000617198 NDUFB1O75438 58 aa10.88□□□□□ -0.67
DDX1-207ENST00000617198 PHF5AQ7RTV0 110 aaKnown RBP10.88□□□□□ -0.67
DDX1-207ENST00000617198 CYP4F30PQ9H0H9 118 aa10.88□□□□□ -0.67
DDX1-207ENST00000617198 SPRR1BP22528 89 aa10.88□□□□□ -0.67
DDX1-207ENST00000617198 MP68P56378 58 aa10.88□□□□□ -0.67
DDX1-207ENST00000617198 KRTAP11-1Q8IUC1 163 aa10.88□□□□□ -0.67
DDX1-207ENST00000617198 KRTAP29-1A8MX34 341 aaPredicted RBP10.87□□□□□ -0.67
DDX1-207ENST00000617198 H0Y9J4 135 aa10.87□□□□□ -0.67
DDX1-207ENST00000617198 CHTF8P0CG12 524 aa10.87□□□□□ -0.67
DDX1-207ENST00000617198 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
DDX1-207ENST00000617198 DNAH10Q8IVF4 4471 aa10.86□□□□□ -0.67
DDX1-207ENST00000617198 LRCOL1A6NCL2 159 aa10.86□□□□□ -0.67
DDX1-207ENST00000617198 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
DDX1-207ENST00000617198 PRR4Q16378 134 aa10.83□□□□□ -0.68
DDX1-207ENST00000617198 PRR15Q8IV56 129 aa10.83□□□□□ -0.68
DDX1-207ENST00000617198 TRAV22A0A0B4J277 110 aa10.83□□□□□ -0.68
DDX1-207ENST00000617198 Q1T7F1 81 aa10.83□□□□□ -0.68
DDX1-207ENST00000617198 CASC2Q6XLA1 102 aa10.83□□□□□ -0.68
DDX1-207ENST00000617198 LINC00208Q96KT6 92 aa10.82□□□□□ -0.68
DDX1-207ENST00000617198 A8MWP4 228 aa10.81□□□□□ -0.68
DDX1-207ENST00000617198 LINC00472Q9H8W2 130 aa10.81□□□□□ -0.68
DDX1-207ENST00000617198 NBEAL1Q6ZS30 2694 aa10.8□□□□□ -0.68
DDX1-207ENST00000617198 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
DDX1-207ENST00000617198 H0Y9P7 68 aa10.78□□□□□ -0.68
DDX1-207ENST00000617198 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
DDX1-207ENST00000617198 B9D2Q9BPU9 175 aa10.78□□□□□ -0.68
DDX1-207ENST00000617198 APLNQ9ULZ1 77 aa10.78□□□□□ -0.68
DDX1-207ENST00000617198 LYSTQ99698 3801 aa10.78□□□□□ -0.68
DDX1-207ENST00000617198 H3BPC8 53 aa10.78□□□□□ -0.68
DDX1-207ENST00000617198 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
DDX1-207ENST00000617198 SPANXA2-OT1Q8N9U9 137 aa10.73□□□□□ -0.69
DDX1-207ENST00000617198 COL6A5A8TX70 2615 aa10.73□□□□□ -0.69
DDX1-207ENST00000617198 SRRM2Q9UQ35 2752 aaKnown RBP10.72□□□□□ -0.69
DDX1-207ENST00000617198 KRTAP13-1Q8IUC0 172 aa10.71□□□□□ -0.69
DDX1-207ENST00000617198 MMP24-AS1A0A0U1RRL7 71 aa10.69□□□□□ -0.7
DDX1-207ENST00000617198 PANO1I0J062 215 aa10.69□□□□□ -0.7
DDX1-207ENST00000617198 PSPHP1O15172 72 aa10.68□□□□□ -0.7
DDX1-207ENST00000617198 V9GYY9 64 aa10.67□□□□□ -0.7
DDX1-207ENST00000617198 NBDYA0A0U1RRE5 68 aa10.65□□□□□ -0.7
DDX1-207ENST00000617198 COL7A1Q02388 2944 aa10.65□□□□□ -0.71
DDX1-207ENST00000617198 STAB2Q8WWQ8 2551 aa10.64□□□□□ -0.71
DDX1-207ENST00000617198 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
DDX1-207ENST00000617198 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
DDX1-207ENST00000617198 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
DDX1-207ENST00000617198 Q96NJ1 140 aa10.63□□□□□ -0.71
DDX1-207ENST00000617198 DYNC2H1Q8NCM8 4307 aaKnown RBP10.61□□□□□ -0.71
DDX1-207ENST00000617198 SPACA4Q8TDM5 124 aa10.6□□□□□ -0.71
DDX1-207ENST00000617198 A8MUN3 132 aa10.59□□□□□ -0.71
DDX1-207ENST00000617198 ASB16-AS1Q495Z4 193 aa10.59□□□□□ -0.71
DDX1-207ENST00000617198 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.59□□□□□ -0.71
DDX1-207ENST00000617198 DNAH7Q8WXX0 4024 aa10.59□□□□□ -0.71
DDX1-207ENST00000617198 MOBPQ13875 183 aa10.58□□□□□ -0.72
DDX1-207ENST00000617198 MDFIQ99750 246 aa10.58□□□□□ -0.72
DDX1-207ENST00000617198 LINC00483Q53H64 154 aa10.58□□□□□ -0.72
DDX1-207ENST00000617198 TP53AIP1Q9HCN2 124 aa10.57□□□□□ -0.72
DDX1-207ENST00000617198 CSMD3Q7Z407 3707 aa10.57□□□□□ -0.72
DDX1-207ENST00000617198 MGAM2Q2M2H8 2515 aa10.57□□□□□ -0.72
DDX1-207ENST00000617198 IGLV7-46A0A075B6I9 117 aa10.56□□□□□ -0.72
DDX1-207ENST00000617198 Q8N9P0 234 aaPredicted RBP10.55□□□□□ -0.72
DDX1-207ENST00000617198 C8orf17Q9NRJ1 99 aa10.55□□□□□ -0.72
DDX1-207ENST00000617198 Q5VV11 94 aa10.54□□□□□ -0.72
DDX1-207ENST00000617198 LIMD2Q9BT23 127 aa10.54□□□□□ -0.72
DDX1-207ENST00000617198 NUPR2A6NF83 97 aa10.54□□□□□ -0.72
DDX1-207ENST00000617198 ZNF706Q9Y5V0 76 aaPredicted RBP10.53□□□□□ -0.72
DDX1-207ENST00000617198 TENM2Q9NT68 2774 aa10.52□□□□□ -0.72
DDX1-207ENST00000617198 COA5Q86WW8 74 aa10.51□□□□□ -0.73
DDX1-207ENST00000617198 WWC2-AS2Q96NR7 200 aa10.51□□□□□ -0.73
DDX1-207ENST00000617198 A0A1B0GVX0 72 aa10.5□□□□□ -0.73
DDX1-207ENST00000617198 PCOTHQ58A44 107 aa10.5□□□□□ -0.73
DDX1-207ENST00000617198 Q6ZR54 194 aa10.5□□□□□ -0.73
DDX1-207ENST00000617198 IGHV6-1A0A0B4J1U7 121 aa10.49□□□□□ -0.73
DDX1-207ENST00000617198 PLECQ15149 4684 aaKnown RBP10.48□□□□□ -0.73
DDX1-207ENST00000617198 A0A087WTM6 91 aa10.47□□□□□ -0.73
DDX1-207ENST00000617198 CD164Q04900 197 aa10.47□□□□□ -0.73
DDX1-207ENST00000617198 IGLV5-52A0A0A0MRZ9 124 aa10.47□□□□□ -0.73
DDX1-207ENST00000617198 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
DDX1-207ENST00000617198 PSORS1C2Q9UIG4 136 aa10.47□□□□□ -0.73
DDX1-207ENST00000617198 NDUFS5O43920 106 aa10.46□□□□□ -0.73
DDX1-207ENST00000617198 PRR15LQ9BU68 103 aa10.46□□□□□ -0.73
DDX1-207ENST00000617198 CHKB-CPT1BH3BT56 60 aa10.45□□□□□ -0.74
DDX1-207ENST00000617198 MRPL34Q9BQ48 92 aaKnown RBP10.45□□□□□ -0.74
DDX1-207ENST00000617198 RTL8CO15255 209 aa10.43□□□□□ -0.74
DDX1-207ENST00000617198 ANAPC11Q9NYG5 84 aa10.43□□□□□ -0.74
DDX1-207ENST00000617198 ZNF861PO60384 105 aa10.42□□□□□ -0.74
DDX1-207ENST00000617198 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
DDX1-207ENST00000617198 LOC101927531A0A1B0GV80 90 aa10.4□□□□□ -0.75
DDX1-207ENST00000617198 A8MU10 97 aa10.4□□□□□ -0.75
DDX1-207ENST00000617198 A0A087X002 238 aa10.38□□□□□ -0.75
DDX1-207ENST00000617198 Q75L30 129 aa10.38□□□□□ -0.75
DDX1-207ENST00000617198 NOTCH2NLQ7Z3S9 236 aa10.38□□□□□ -0.75
DDX1-207ENST00000617198 PMAIP1Q13794 54 aa10.37□□□□□ -0.75
DDX1-207ENST00000617198 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms