RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FAM229BQ4G0N7 80 aa3.23□□□□□ -1.89
CPNE3-208ENST00000614678 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
CPNE3-208ENST00000614678 ELOF1P60002 83 aaKnown RBP3.22□□□□□ -1.89
CPNE3-208ENST00000614678 C9orf153Q5TBE3 101 aa3.21□□□□□ -1.89
CPNE3-208ENST00000614678 GTF2H5Q6ZYL4 71 aa3.21□□□□□ -1.89
CPNE3-208ENST00000614678 SMIM29Q86T20 159 aa3.21□□□□□ -1.89
CPNE3-208ENST00000614678 F8W1H4 67 aa3.21□□□□□ -1.9
CPNE3-208ENST00000614678 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 COX7BP24311 80 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 SPCS1Q9Y6A9 102 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 A0A1B0GWB2 263 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 FXYD2P54710 66 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 HIST1H4GQ99525 98 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 CFC1BP0CG36 223 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 CFC1P0CG37 223 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 Q8N377 158 aa3.2□□□□□ -1.9
CPNE3-208ENST00000614678 FAM218AQ96MZ4 157 aa3.19□□□□□ -1.9
CPNE3-208ENST00000614678 K7ERJ3 54 aa3.19□□□□□ -1.9
CPNE3-208ENST00000614678 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
CPNE3-208ENST00000614678 IFITM1P13164 125 aa3.18□□□□□ -1.9
CPNE3-208ENST00000614678 ETDBQ3ZM63 59 aa3.18□□□□□ -1.9
CPNE3-208ENST00000614678 ZNF706Q9Y5V0 76 aaPredicted RBP3.18□□□□□ -1.9
CPNE3-208ENST00000614678 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
CPNE3-208ENST00000614678 TAL2Q16559 108 aa3.18□□□□□ -1.9
CPNE3-208ENST00000614678 H3BMG7 143 aa3.17□□□□□ -1.9
CPNE3-208ENST00000614678 Q6ZQY7 126 aa3.17□□□□□ -1.9
CPNE3-208ENST00000614678 HIGD1BQ9P298 99 aa3.17□□□□□ -1.9
CPNE3-208ENST00000614678 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
CPNE3-208ENST00000614678 RAB37Q96AX2 223 aa3.17□□□□□ -1.9
CPNE3-208ENST00000614678 C9orf92A6NGG3 77 aa3.16□□□□□ -1.9
CPNE3-208ENST00000614678 SPRR1BP22528 89 aa3.16□□□□□ -1.9
CPNE3-208ENST00000614678 LINC00575Q6W349 94 aa3.16□□□□□ -1.9
CPNE3-208ENST00000614678 TRAV13-2A0A0B4J235 113 aa3.16□□□□□ -1.9
CPNE3-208ENST00000614678 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
CPNE3-208ENST00000614678 DHRS4-AS1Q9P1J3 65 aa3.16□□□□□ -1.9
CPNE3-208ENST00000614678 IGLV5-48A0A075B6I7 105 aa3.15□□□□□ -1.91
CPNE3-208ENST00000614678 SPINK1P00995 79 aa3.15□□□□□ -1.91
CPNE3-208ENST00000614678 FABP2P12104 132 aa3.15□□□□□ -1.91
CPNE3-208ENST00000614678 TEX49A0A1B0GTD5 131 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 Q6Q795 121 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 SSBP3-AS1Q7Z2R9 100 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 CEND1Q8N111 149 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 CLEC2BQ92478 149 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 TPRXLQ17RH7 258 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 hADV29S1A0JD25 119 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 C5orf47Q569G3 176 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 ANAPC13Q9BS18 74 aa3.14□□□□□ -1.91
CPNE3-208ENST00000614678 NHP2Q9NX24 153 aaKnown RBP3.14□□□□□ -1.91
CPNE3-208ENST00000614678 LAMTOR3Q9UHA4 124 aa3.13□□□□□ -1.91
CPNE3-208ENST00000614678 SPAG11AQ6PDA7 123 aa3.13□□□□□ -1.91
CPNE3-208ENST00000614678 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CPNE3-208ENST00000614678 XP32Q5T750 250 aa3.12□□□□□ -1.91
CPNE3-208ENST00000614678 Q5XG85 94 aa3.12□□□□□ -1.91
CPNE3-208ENST00000614678 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
CPNE3-208ENST00000614678 CYSTM1Q9H1C7 97 aa3.12□□□□□ -1.91
CPNE3-208ENST00000614678 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
CPNE3-208ENST00000614678 TRBV7-6A0A0J9YX20 115 aa3.12□□□□□ -1.91
CPNE3-208ENST00000614678 C1orf195Q5TG92 126 aa3.11□□□□□ -1.91
CPNE3-208ENST00000614678 TRBV20-1A0A075B6N2 111 aa3.11□□□□□ -1.91
CPNE3-208ENST00000614678 COPS9Q8WXC6 57 aa3.11□□□□□ -1.91
CPNE3-208ENST00000614678 TEN1Q86WV5 123 aa3.11□□□□□ -1.91
CPNE3-208ENST00000614678 A0A0B4J2C4 111 aa3.1□□□□□ -1.91
CPNE3-208ENST00000614678 PRO1854Q9UHT4 67 aa3.1□□□□□ -1.91
CPNE3-208ENST00000614678 SLC25A20O43772 301 aa3.1□□□□□ -1.91
CPNE3-208ENST00000614678 PPDPFLQ8WWR9 84 aa3.09□□□□□ -1.91
CPNE3-208ENST00000614678 A0A1B0GX51 115 aa3.09□□□□□ -1.92
CPNE3-208ENST00000614678 TCL1BO95988 128 aa3.09□□□□□ -1.92
CPNE3-208ENST00000614678 ANKRD29Q8N6D5 301 aa3.09□□□□□ -1.92
CPNE3-208ENST00000614678 TRBV7-7A0A0K0K1E9 115 aa3.08□□□□□ -1.92
CPNE3-208ENST00000614678 J3QR89 54 aa3.08□□□□□ -1.92
CPNE3-208ENST00000614678 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
CPNE3-208ENST00000614678 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
CPNE3-208ENST00000614678 LCE2AQ5TA79 106 aaPredicted RBP3.08□□□□□ -1.92
CPNE3-208ENST00000614678 FP248Q71RG6 208 aaPredicted RBP3.08□□□□□ -1.92
CPNE3-208ENST00000614678 HIST1H4AP62805 103 aaKnown RBP3.08□□□□□ -1.92
CPNE3-208ENST00000614678 DEFB116Q30KQ4 102 aa3.08□□□□□ -1.92
CPNE3-208ENST00000614678 RPS29P62273 56 aaKnown RBP3.07□□□□□ -1.92
CPNE3-208ENST00000614678 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
CPNE3-208ENST00000614678 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.07□□□□□ -1.92
CPNE3-208ENST00000614678 A0A1W2PNM2 257 aa3.06□□□□□ -1.92
CPNE3-208ENST00000614678 PSMB2P49721 201 aa3.06□□□□□ -1.92
CPNE3-208ENST00000614678 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
CPNE3-208ENST00000614678 ASB16-AS1Q495Z4 193 aa3.06□□□□□ -1.92
CPNE3-208ENST00000614678 IGLV8-61A0A075B6I0 122 aa3.05□□□□□ -1.92
CPNE3-208ENST00000614678 A0A087WSZ3 146 aa3.05□□□□□ -1.92
CPNE3-208ENST00000614678 F8WEM9 126 aa3.05□□□□□ -1.92
CPNE3-208ENST00000614678 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
CPNE3-208ENST00000614678 C4orf26Q17RF5 130 aa3.05□□□□□ -1.92
CPNE3-208ENST00000614678 OBSCN-AS1Q96MR7 158 aa3.05□□□□□ -1.92
CPNE3-208ENST00000614678 Q96NJ1 140 aa3.05□□□□□ -1.92
CPNE3-208ENST00000614678 C9JAW5 83 aa3.04□□□□□ -1.92
CPNE3-208ENST00000614678 CD164Q04900 197 aa3.04□□□□□ -1.92
CPNE3-208ENST00000614678 LIMD2Q9BT23 127 aa3.04□□□□□ -1.92
CPNE3-208ENST00000614678 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
CPNE3-208ENST00000614678 H0YGX0 51 aa3.04□□□□□ -1.92
CPNE3-208ENST00000614678 SEC61GP60059 68 aa3.03□□□□□ -1.92
CPNE3-208ENST00000614678 FAM240AA0A1B0GVK7 77 aa3.02□□□□□ -1.93
CPNE3-208ENST00000614678 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms