RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 UBE2DNLQ8IWF7 75 aa14.1□□□□□ -0.15
POLR2J3-220ENST00000613744 NKAPP1Q8N9T2 125 aa14.09□□□□□ -0.15
POLR2J3-220ENST00000613744 LRCOL1A6NCL2 159 aa14.08□□□□□ -0.15
POLR2J3-220ENST00000613744 C15orf56Q8N910 161 aa14.08□□□□□ -0.15
POLR2J3-220ENST00000613744 HCG22E2RYF7 251 aa14.07□□□□□ -0.16
POLR2J3-220ENST00000613744 Q6ZRX8 168 aa14.06□□□□□ -0.16
POLR2J3-220ENST00000613744 PLA2G2DQ9UNK4 145 aa14.06□□□□□ -0.16
POLR2J3-220ENST00000613744 PSPHP1O15172 72 aa14.05□□□□□ -0.16
POLR2J3-220ENST00000613744 C7orf33Q8WU49 177 aa14.05□□□□□ -0.16
POLR2J3-220ENST00000613744 K7EQZ3 153 aa14.04□□□□□ -0.16
POLR2J3-220ENST00000613744 LY6G6CO95867 125 aa14.04□□□□□ -0.16
POLR2J3-220ENST00000613744 KRTAP4-16G5E9R7 235 aaPredicted RBP14.01□□□□□ -0.17
POLR2J3-220ENST00000613744 SPRR1AP35321 89 aa14.01□□□□□ -0.17
POLR2J3-220ENST00000613744 MP68P56378 58 aa14.01□□□□□ -0.17
POLR2J3-220ENST00000613744 SPANXA2-OT1Q8N9U9 137 aa14.01□□□□□ -0.17
POLR2J3-220ENST00000613744 ST20-AS1Q8NBB2 130 aa14□□□□□ -0.17
POLR2J3-220ENST00000613744 DNAH1Q9P2D7 4330 aa14□□□□□ -0.17
POLR2J3-220ENST00000613744 CD164Q04900 197 aa14□□□□□ -0.17
POLR2J3-220ENST00000613744 SYCNQ0VAF6 134 aa14□□□□□ -0.17
POLR2J3-220ENST00000613744 IGLV5-37A0A075B6J1 123 aa13.99□□□□□ -0.17
POLR2J3-220ENST00000613744 UBE2BP63146 152 aa13.99□□□□□ -0.17
POLR2J3-220ENST00000613744 H3BPC8 53 aa13.99□□□□□ -0.17
POLR2J3-220ENST00000613744 LINC00476Q8WZB0 136 aa13.99□□□□□ -0.17
POLR2J3-220ENST00000613744 LINC01556Q5JQF7 62 aa13.98□□□□□ -0.17
POLR2J3-220ENST00000613744 Q9BRP9 147 aa13.98□□□□□ -0.17
POLR2J3-220ENST00000613744 TLX1NBP0CAT3 122 aa13.97□□□□□ -0.17
POLR2J3-220ENST00000613744 SERTAD4-AS1Q5TG53 156 aa13.97□□□□□ -0.17
POLR2J3-220ENST00000613744 LIMD2Q9BT23 127 aa13.97□□□□□ -0.17
POLR2J3-220ENST00000613744 KMT2AQ03164 3969 aa13.96□□□□□ -0.17
POLR2J3-220ENST00000613744 A8MUN3 132 aa13.96□□□□□ -0.17
POLR2J3-220ENST00000613744 DNAH10OSP0CZ25 163 aa13.96□□□□□ -0.17
POLR2J3-220ENST00000613744 VPS13DQ5THJ4 4388 aa13.96□□□□□ -0.18
POLR2J3-220ENST00000613744 UBE2AP49459 152 aa13.95□□□□□ -0.18
POLR2J3-220ENST00000613744 Q5VV11 94 aa13.95□□□□□ -0.18
POLR2J3-220ENST00000613744 IGLV1-50A0A075B6I6 118 aa13.93□□□□□ -0.18
POLR2J3-220ENST00000613744 KRTAP1-5Q9BYS1 174 aa13.91□□□□□ -0.18
POLR2J3-220ENST00000613744 HYDINQ4G0P3 5121 aa13.91□□□□□ -0.18
POLR2J3-220ENST00000613744 ALMS1Q8TCU4 4167 aa13.89□□□□□ -0.19
POLR2J3-220ENST00000613744 PRR4Q16378 134 aa13.89□□□□□ -0.19
POLR2J3-220ENST00000613744 MRPL55Q7Z7F7 128 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-220ENST00000613744 Q8N9P0 234 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-220ENST00000613744 LINC00208Q96KT6 92 aa13.87□□□□□ -0.19
POLR2J3-220ENST00000613744 KMT2CQ8NEZ4 4911 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-220ENST00000613744 NBDYA0A0U1RRE5 68 aa13.86□□□□□ -0.19
POLR2J3-220ENST00000613744 IGKV2D-24A0A075B6R9 120 aa13.84□□□□□ -0.19
POLR2J3-220ENST00000613744 SACSQ9NZJ4 4579 aa13.83□□□□□ -0.19
POLR2J3-220ENST00000613744 KRTAP29-1A8MX34 341 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-220ENST00000613744 RPL37AP8A6NKH3 93 aa13.81□□□□□ -0.2
POLR2J3-220ENST00000613744 KTN1-AS1Q86SY8 53 aa13.81□□□□□ -0.2
POLR2J3-220ENST00000613744 CHKB-CPT1BH3BT56 60 aa13.81□□□□□ -0.2
POLR2J3-220ENST00000613744 IGLV8-61A0A075B6I0 122 aa13.8□□□□□ -0.2
POLR2J3-220ENST00000613744 WFDC13Q8IUB5 93 aa13.79□□□□□ -0.2
POLR2J3-220ENST00000613744 H0Y9P7 68 aa13.78□□□□□ -0.2
POLR2J3-220ENST00000613744 ATP11AUNQ6ZP68 121 aa13.78□□□□□ -0.2
POLR2J3-220ENST00000613744 Q75L30 129 aa13.78□□□□□ -0.2
POLR2J3-220ENST00000613744 Q6ZR54 194 aa13.78□□□□□ -0.2
POLR2J3-220ENST00000613744 DNAH10Q8IVF4 4471 aa13.77□□□□□ -0.2
POLR2J3-220ENST00000613744 IGFL1Q6UW32 110 aa13.77□□□□□ -0.21
POLR2J3-220ENST00000613744 LOC101927531A0A1B0GV80 90 aa13.76□□□□□ -0.21
POLR2J3-220ENST00000613744 C16orf90A8MZG2 172 aa13.76□□□□□ -0.21
POLR2J3-220ENST00000613744 C9orf163Q8N9P6 203 aa13.75□□□□□ -0.21
POLR2J3-220ENST00000613744 PRR15LQ9BU68 103 aa13.75□□□□□ -0.21
POLR2J3-220ENST00000613744 NDUFS5O43920 106 aa13.73□□□□□ -0.21
POLR2J3-220ENST00000613744 DNAH6Q9C0G6 4158 aa13.72□□□□□ -0.21
POLR2J3-220ENST00000613744 REG3GQ6UW15 175 aa13.71□□□□□ -0.21
POLR2J3-220ENST00000613744 CASC2Q6XLA1 102 aa13.71□□□□□ -0.21
POLR2J3-220ENST00000613744 RYR2Q92736 4967 aa13.71□□□□□ -0.21
POLR2J3-220ENST00000613744 DNAH2Q9P225 4427 aa13.71□□□□□ -0.21
POLR2J3-220ENST00000613744 FAM168BA1KXE4 195 aa13.71□□□□□ -0.21
POLR2J3-220ENST00000613744 A8MU10 97 aa13.7□□□□□ -0.22
POLR2J3-220ENST00000613744 KRTAP7-1Q8IUC3 87 aa13.7□□□□□ -0.22
POLR2J3-220ENST00000613744 C1orf134Q5TEV5 83 aa13.69□□□□□ -0.22
POLR2J3-220ENST00000613744 A0A087WSZ3 146 aa13.68□□□□□ -0.22
POLR2J3-220ENST00000613744 PHF5AQ7RTV0 110 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-220ENST00000613744 DEFB116Q30KQ4 102 aa13.66□□□□□ -0.22
POLR2J3-220ENST00000613744 Q6ZRN7 208 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-220ENST00000613744 IGLV7-46A0A075B6I9 117 aa13.65□□□□□ -0.22
POLR2J3-220ENST00000613744 A8MWP4 228 aa13.64□□□□□ -0.23
POLR2J3-220ENST00000613744 RYR3Q15413 4870 aa13.64□□□□□ -0.23
POLR2J3-220ENST00000613744 CNBPP62633 177 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-220ENST00000613744 LCA10Q71F78 164 aa13.63□□□□□ -0.23
POLR2J3-220ENST00000613744 COA5Q86WW8 74 aa13.63□□□□□ -0.23
POLR2J3-220ENST00000613744 CDC42SE1Q9NRR8 79 aa13.63□□□□□ -0.23
POLR2J3-220ENST00000613744 A6NN06 94 aa13.62□□□□□ -0.23
POLR2J3-220ENST00000613744 FRAS1Q86XX4 4008 aa13.62□□□□□ -0.23
POLR2J3-220ENST00000613744 A6NED7 52 aa13.61□□□□□ -0.23
POLR2J3-220ENST00000613744 RTL8CO15255 209 aa13.61□□□□□ -0.23
POLR2J3-220ENST00000613744 RBM12B-AS1Q9P1G2 102 aa13.6□□□□□ -0.23
POLR2J3-220ENST00000613744 RPL37AP61513 92 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-220ENST00000613744 SPTSSBQ8NFR3 76 aa13.59□□□□□ -0.23
POLR2J3-220ENST00000613744 LINC01558Q9Y6Z2 57 aa13.57□□□□□ -0.24
POLR2J3-220ENST00000613744 A0A0G2JQZ4 141 aa13.56□□□□□ -0.24
POLR2J3-220ENST00000613744 A0A1W2PNN7 141 aa13.56□□□□□ -0.24
POLR2J3-220ENST00000613744 LINC00472Q9H8W2 130 aa13.56□□□□□ -0.24
POLR2J3-220ENST00000613744 PLAC8Q9NZF1 115 aa13.55□□□□□ -0.24
POLR2J3-220ENST00000613744 SPRR1BP22528 89 aa13.52□□□□□ -0.24
POLR2J3-220ENST00000613744 DNAH17Q9UFH2 4485 aa13.52□□□□□ -0.25
POLR2J3-220ENST00000613744 A0A087WTM6 91 aa13.5□□□□□ -0.25
POLR2J3-220ENST00000613744 TP53AIP1Q9HCN2 124 aa13.49□□□□□ -0.25
POLR2J3-220ENST00000613744 C7orf65Q6ZTY9 151 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms