RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 KMT2BQ9UMN6 2715 aaPredicted RBP10.41□□□□□ -0.74
TSKU-205ENST00000612930 CNBPP62633 177 aaKnown RBP10.41□□□□□ -0.74
TSKU-205ENST00000612930 IGLV8-61A0A075B6I0 122 aa10.41□□□□□ -0.74
TSKU-205ENST00000612930 LCA10Q71F78 164 aa10.4□□□□□ -0.74
TSKU-205ENST00000612930 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.75
TSKU-205ENST00000612930 TRRAPQ9Y4A5 3859 aa10.38□□□□□ -0.75
TSKU-205ENST00000612930 PRLHP81277 87 aa10.38□□□□□ -0.75
TSKU-205ENST00000612930 KTN1-AS1Q86SY8 53 aa10.37□□□□□ -0.75
TSKU-205ENST00000612930 SPTSSBQ8NFR3 76 aa10.37□□□□□ -0.75
TSKU-205ENST00000612930 Q75L30 129 aa10.36□□□□□ -0.75
TSKU-205ENST00000612930 NOTCH2Q04721 2471 aa10.36□□□□□ -0.75
TSKU-205ENST00000612930 ITPR2Q14571 2701 aa10.36□□□□□ -0.75
TSKU-205ENST00000612930 TENM4Q6N022 2769 aa10.36□□□□□ -0.75
TSKU-205ENST00000612930 DEFB131BA0A096LNP1 70 aa10.36□□□□□ -0.75
TSKU-205ENST00000612930 LOC101927531A0A1B0GV80 90 aa10.35□□□□□ -0.75
TSKU-205ENST00000612930 COA5Q86WW8 74 aa10.35□□□□□ -0.75
TSKU-205ENST00000612930 A8MWP4 228 aa10.33□□□□□ -0.76
TSKU-205ENST00000612930 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
TSKU-205ENST00000612930 LINC00472Q9H8W2 130 aa10.32□□□□□ -0.76
TSKU-205ENST00000612930 A6NED7 52 aa10.31□□□□□ -0.76
TSKU-205ENST00000612930 IGLV7-46A0A075B6I9 117 aa10.31□□□□□ -0.76
TSKU-205ENST00000612930 TENM3Q9P273 2699 aa10.31□□□□□ -0.76
TSKU-205ENST00000612930 OTOGQ6ZRI0 2925 aa10.3□□□□□ -0.76
TSKU-205ENST00000612930 RBM12B-AS1Q9P1G2 102 aa10.3□□□□□ -0.76
TSKU-205ENST00000612930 TEP1Q99973 2627 aaKnown RBP10.3□□□□□ -0.76
TSKU-205ENST00000612930 A6NN06 94 aa10.29□□□□□ -0.76
TSKU-205ENST00000612930 DNAH1Q9P2D7 4330 aa10.28□□□□□ -0.76
TSKU-205ENST00000612930 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
TSKU-205ENST00000612930 MMP24-AS1A0A0U1RRL7 71 aa10.27□□□□□ -0.77
TSKU-205ENST00000612930 ATRQ13535 2644 aa10.27□□□□□ -0.77
TSKU-205ENST00000612930 C11orf45Q8TAV5 145 aa10.26□□□□□ -0.77
TSKU-205ENST00000612930 BAHCC1Q9P281 2608 aa10.26□□□□□ -0.77
TSKU-205ENST00000612930 KRTAP10-11P60412 298 aa10.25□□□□□ -0.77
TSKU-205ENST00000612930 A0A096LNI7 61 aa10.25□□□□□ -0.77
TSKU-205ENST00000612930 CDC42SE1Q9NRR8 79 aa10.25□□□□□ -0.77
TSKU-205ENST00000612930 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
TSKU-205ENST00000612930 IGKV2-24A0A0C4DH68 120 aa10.23□□□□□ -0.77
TSKU-205ENST00000612930 PHF5AQ7RTV0 110 aaKnown RBP10.23□□□□□ -0.77
TSKU-205ENST00000612930 H0Y9J4 135 aa10.23□□□□□ -0.77
TSKU-205ENST00000612930 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
TSKU-205ENST00000612930 NDUFS5O43920 106 aa10.22□□□□□ -0.77
TSKU-205ENST00000612930 KRTAP11-1Q8IUC1 163 aa10.21□□□□□ -0.77
TSKU-205ENST00000612930 INAFM1C9JVW0 142 aa10.21□□□□□ -0.78
TSKU-205ENST00000612930 SPRR1BP22528 89 aa10.21□□□□□ -0.78
TSKU-205ENST00000612930 LINC01558Q9Y6Z2 57 aa10.21□□□□□ -0.78
TSKU-205ENST00000612930 SRRM2Q9UQ35 2752 aaKnown RBP10.21□□□□□ -0.78
TSKU-205ENST00000612930 SPAG11AQ6PDA7 123 aa10.2□□□□□ -0.78
TSKU-205ENST00000612930 MOBPQ13875 183 aa10.18□□□□□ -0.78
TSKU-205ENST00000612930 ANK2Q01484 3957 aa10.17□□□□□ -0.78
TSKU-205ENST00000612930 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
TSKU-205ENST00000612930 FASNP49327 2511 aaKnown RBP10.17□□□□□ -0.78
TSKU-205ENST00000612930 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
TSKU-205ENST00000612930 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
TSKU-205ENST00000612930 SPINK7P58062 85 aa10.14□□□□□ -0.79
TSKU-205ENST00000612930 Q6ZR54 194 aa10.12□□□□□ -0.79
TSKU-205ENST00000612930 C7orf65Q6ZTY9 151 aa10.12□□□□□ -0.79
TSKU-205ENST00000612930 Q96NJ1 140 aa10.12□□□□□ -0.79
TSKU-205ENST00000612930 NSD1Q96L73 2696 aaPredicted RBP10.12□□□□□ -0.79
TSKU-205ENST00000612930 HRES1P13985 223 aa10.11□□□□□ -0.79
TSKU-205ENST00000612930 TP53AIP1Q9HCN2 124 aa10.11□□□□□ -0.79
TSKU-205ENST00000612930 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
TSKU-205ENST00000612930 HECTD1Q9ULT8 2610 aa10.09□□□□□ -0.79
TSKU-205ENST00000612930 J3QKU1 62 aa10.07□□□□□ -0.8
TSKU-205ENST00000612930 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
TSKU-205ENST00000612930 FLNBO75369 2602 aaKnown RBP10.07□□□□□ -0.8
TSKU-205ENST00000612930 DNAH10Q8IVF4 4471 aa10.07□□□□□ -0.8
TSKU-205ENST00000612930 KRTAP1-5Q9BYS1 174 aa10.05□□□□□ -0.8
TSKU-205ENST00000612930 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.8
TSKU-205ENST00000612930 FBN1P35555 2871 aaKnown RBP10□□□□□ -0.81
TSKU-205ENST00000612930 IGHV6-1A0A0B4J1U7 121 aa10□□□□□ -0.81
TSKU-205ENST00000612930 IGLV9-49A0A0B4J1Y8 123 aa9.99□□□□□ -0.81
TSKU-205ENST00000612930 KRTAP13-1Q8IUC0 172 aa9.99□□□□□ -0.81
TSKU-205ENST00000612930 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
TSKU-205ENST00000612930 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
TSKU-205ENST00000612930 MRPL34Q9BQ48 92 aaKnown RBP9.96□□□□□ -0.81
TSKU-205ENST00000612930 MAST4O15021 2626 aa9.96□□□□□ -0.82
TSKU-205ENST00000612930 A0A087X002 238 aa9.96□□□□□ -0.82
TSKU-205ENST00000612930 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.82
TSKU-205ENST00000612930 LYSTQ99698 3801 aa9.95□□□□□ -0.82
TSKU-205ENST00000612930 CMYA5Q8N3K9 4069 aa9.95□□□□□ -0.82
TSKU-205ENST00000612930 K7EIL1 84 aa9.95□□□□□ -0.82
TSKU-205ENST00000612930 DNAH9Q9NYC9 4486 aa9.92□□□□□ -0.82
TSKU-205ENST00000612930 PANO1I0J062 215 aa9.91□□□□□ -0.82
TSKU-205ENST00000612930 LINC00313P59037 77 aa9.91□□□□□ -0.82
TSKU-205ENST00000612930 DNAH3Q8TD57 4116 aa9.9□□□□□ -0.82
TSKU-205ENST00000612930 Q5W150 140 aa9.89□□□□□ -0.83
TSKU-205ENST00000612930 PRAC1Q96KF2 57 aa9.89□□□□□ -0.83
TSKU-205ENST00000612930 MDFIQ99750 246 aa9.88□□□□□ -0.83
TSKU-205ENST00000612930 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
TSKU-205ENST00000612930 C14orf177Q52M58 125 aa9.86□□□□□ -0.83
TSKU-205ENST00000612930 ALMS1Q8TCU4 4167 aa9.86□□□□□ -0.83
TSKU-205ENST00000612930 C8orf87E5RJ46 101 aa9.86□□□□□ -0.83
TSKU-205ENST00000612930 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
TSKU-205ENST00000612930 COL7A1Q02388 2944 aa9.86□□□□□ -0.83
TSKU-205ENST00000612930 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
TSKU-205ENST00000612930 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
TSKU-205ENST00000612930 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
TSKU-205ENST00000612930 NOTCH1P46531 2555 aa9.83□□□□□ -0.84
TSKU-205ENST00000612930 WWC2-AS2Q96NR7 200 aa9.82□□□□□ -0.84
TSKU-205ENST00000612930 ACYP2P14621 99 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms