RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
CDH1-213ENST00000612417 C1orf137Q5JT78 98 aa9.33□□□□□ -0.92
CDH1-213ENST00000612417 VPS13DQ5THJ4 4388 aa9.33□□□□□ -0.92
CDH1-213ENST00000612417 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
CDH1-213ENST00000612417 Q8NBF4 154 aa9.32□□□□□ -0.92
CDH1-213ENST00000612417 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
CDH1-213ENST00000612417 Q8N9L7 120 aa9.32□□□□□ -0.92
CDH1-213ENST00000612417 SPRR4Q96PI1 79 aa9.32□□□□□ -0.92
CDH1-213ENST00000612417 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
CDH1-213ENST00000612417 WWC2-AS2Q96NR7 200 aa9.31□□□□□ -0.92
CDH1-213ENST00000612417 LINC00474Q9P2X8 69 aa9.3□□□□□ -0.92
CDH1-213ENST00000612417 UBE2BP63146 152 aa9.3□□□□□ -0.92
CDH1-213ENST00000612417 C14orf177Q52M58 125 aa9.3□□□□□ -0.92
CDH1-213ENST00000612417 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.29□□□□□ -0.92
CDH1-213ENST00000612417 C16orf90A8MZG2 172 aa9.29□□□□□ -0.92
CDH1-213ENST00000612417 OCR1Q9BZK8 76 aa9.28□□□□□ -0.92
CDH1-213ENST00000612417 SNURFQ9Y675 71 aa9.28□□□□□ -0.92
CDH1-213ENST00000612417 A0A096LNI7 61 aa9.27□□□□□ -0.93
CDH1-213ENST00000612417 LY6G6CO95867 125 aa9.27□□□□□ -0.93
CDH1-213ENST00000612417 F8WEM9 126 aa9.27□□□□□ -0.93
CDH1-213ENST00000612417 SMIM29Q86T20 159 aa9.27□□□□□ -0.93
CDH1-213ENST00000612417 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
CDH1-213ENST00000612417 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
CDH1-213ENST00000612417 LRCOL1A6NCL2 159 aa9.25□□□□□ -0.93
CDH1-213ENST00000612417 TMEM254Q8TBM7 123 aa9.25□□□□□ -0.93
CDH1-213ENST00000612417 A0A1W2PNN7 141 aa9.22□□□□□ -0.93
CDH1-213ENST00000612417 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
CDH1-213ENST00000612417 Q6ZR54 194 aa9.22□□□□□ -0.93
CDH1-213ENST00000612417 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
CDH1-213ENST00000612417 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.93
CDH1-213ENST00000612417 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.93
CDH1-213ENST00000612417 DSCR10P59022 87 aa9.19□□□□□ -0.94
CDH1-213ENST00000612417 PRLHP81277 87 aa9.19□□□□□ -0.94
CDH1-213ENST00000612417 C1orf134Q5TEV5 83 aa9.19□□□□□ -0.94
CDH1-213ENST00000612417 IGFL1Q6UW32 110 aa9.18□□□□□ -0.94
CDH1-213ENST00000612417 A0A087WTM6 91 aa9.17□□□□□ -0.94
CDH1-213ENST00000612417 MPLKIPQ8TAP9 179 aa9.17□□□□□ -0.94
CDH1-213ENST00000612417 H0Y9J4 135 aa9.17□□□□□ -0.94
CDH1-213ENST00000612417 LCE6AA0A183 80 aa9.16□□□□□ -0.94
CDH1-213ENST00000612417 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
CDH1-213ENST00000612417 K7EQZ3 153 aa9.14□□□□□ -0.95
CDH1-213ENST00000612417 HIGD2AQ9BW72 106 aa9.14□□□□□ -0.95
CDH1-213ENST00000612417 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
CDH1-213ENST00000612417 HECTD4Q9Y4D8 3996 aa9.13□□□□□ -0.95
CDH1-213ENST00000612417 SPRR1BP22528 89 aa9.13□□□□□ -0.95
CDH1-213ENST00000612417 DNAH6Q9C0G6 4158 aa9.13□□□□□ -0.95
CDH1-213ENST00000612417 DNAH2Q9P225 4427 aa9.13□□□□□ -0.95
CDH1-213ENST00000612417 FAM229BQ4G0N7 80 aa9.12□□□□□ -0.95
CDH1-213ENST00000612417 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
CDH1-213ENST00000612417 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
CDH1-213ENST00000612417 Q1T7F1 81 aa9.11□□□□□ -0.95
CDH1-213ENST00000612417 ALMS1Q8TCU4 4167 aa9.11□□□□□ -0.95
CDH1-213ENST00000612417 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
CDH1-213ENST00000612417 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
CDH1-213ENST00000612417 UBE2AP49459 152 aa9.1□□□□□ -0.95
CDH1-213ENST00000612417 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
CDH1-213ENST00000612417 RTL8CO15255 209 aa9.08□□□□□ -0.96
CDH1-213ENST00000612417 KTN1-AS1Q86SY8 53 aa9.08□□□□□ -0.96
CDH1-213ENST00000612417 A0A087WSZ3 146 aa9.08□□□□□ -0.96
CDH1-213ENST00000612417 RBM12B-AS1Q9P1G2 102 aa9.07□□□□□ -0.96
CDH1-213ENST00000612417 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
CDH1-213ENST00000612417 ZCCHC13Q8WW36 166 aaKnown RBP9.05□□□□□ -0.96
CDH1-213ENST00000612417 PANO1I0J062 215 aa9.04□□□□□ -0.96
CDH1-213ENST00000612417 FRAS1Q86XX4 4008 aa9.04□□□□□ -0.96
CDH1-213ENST00000612417 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
CDH1-213ENST00000612417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
CDH1-213ENST00000612417 SRRM2Q9UQ35 2752 aaKnown RBP9.02□□□□□ -0.97
CDH1-213ENST00000612417 NDUFS5O43920 106 aa9.02□□□□□ -0.97
CDH1-213ENST00000612417 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
CDH1-213ENST00000612417 HYDINQ4G0P3 5121 aa9.02□□□□□ -0.97
CDH1-213ENST00000612417 DEFB116Q30KQ4 102 aa9.01□□□□□ -0.97
CDH1-213ENST00000612417 SPACA4Q8TDM5 124 aa9.01□□□□□ -0.97
CDH1-213ENST00000612417 hDV103S1A0JD37 113 aa8.99□□□□□ -0.97
CDH1-213ENST00000612417 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
CDH1-213ENST00000612417 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
CDH1-213ENST00000612417 WFDC13Q8IUB5 93 aa8.96□□□□□ -0.97
CDH1-213ENST00000612417 A8MWP4 228 aa8.96□□□□□ -0.98
CDH1-213ENST00000612417 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.98
CDH1-213ENST00000612417 KRTAP10-2P60368 255 aa8.95□□□□□ -0.98
CDH1-213ENST00000612417 CASC2Q6XLA1 102 aa8.92□□□□□ -0.98
CDH1-213ENST00000612417 NDUFB1O75438 58 aa8.91□□□□□ -0.98
CDH1-213ENST00000612417 MP68P56378 58 aa8.91□□□□□ -0.98
CDH1-213ENST00000612417 LINC00483Q53H64 154 aa8.91□□□□□ -0.98
CDH1-213ENST00000612417 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
CDH1-213ENST00000612417 PLAC8Q9NZF1 115 aa8.9□□□□□ -0.98
CDH1-213ENST00000612417 SACSQ9NZJ4 4579 aa8.9□□□□□ -0.98
CDH1-213ENST00000612417 TRAV22A0A0B4J277 110 aa8.89□□□□□ -0.99
CDH1-213ENST00000612417 CYP4F30PQ9H0H9 118 aa8.89□□□□□ -0.99
CDH1-213ENST00000612417 H3BPC8 53 aa8.89□□□□□ -0.99
CDH1-213ENST00000612417 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
CDH1-213ENST00000612417 FAT2Q9NYQ8 4349 aa8.87□□□□□ -0.99
CDH1-213ENST00000612417 PKD1P98161 4303 aa8.87□□□□□ -0.99
CDH1-213ENST00000612417 ATP11AUNQ6ZP68 121 aa8.86□□□□□ -0.99
CDH1-213ENST00000612417 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
CDH1-213ENST00000612417 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
CDH1-213ENST00000612417 Q96NJ1 140 aa8.85□□□□□ -0.99
CDH1-213ENST00000612417 MMP24-AS1A0A0U1RRL7 71 aa8.85□□□□□ -0.99
CDH1-213ENST00000612417 PSPHP1O15172 72 aa8.85□□□□□ -0.99
CDH1-213ENST00000612417 IGLV9-49A0A0B4J1Y8 123 aa8.84□□□□□ -0.99
CDH1-213ENST00000612417 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms