RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PRLHP81277 87 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST2H2BEQ16778 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 BOD1L2Q8IYS8 172 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BHQ93079 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 SPRR4Q96PI1 79 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BNQ99877 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIST1H2BMQ99879 126 aa1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 ZNF706Q9Y5V0 76 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP3-201ENST00000600888 TRBV10-3A0A0K0K1G6 114 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 A0A1B0GVX0 72 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 SYS1-DBNDD2H3BUS1 97 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 TIMM17BO60830 172 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 IGLV6-57P01721 117 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 FABP4P15090 132 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 LGALS3P17931 250 aaKnown RBP1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 S100A12P80511 92 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 LINC01545Q5VT33 79 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 HIGD2AQ9BW72 106 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 SPANXB1Q9NS25 103 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 CBY1Q9Y3M2 126 aa1.91□□□□□ -2.1
CKS1BP3-201ENST00000600888 ETDCA0A1B0GVM5 59 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 DDTP30046 118 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 RPS29P62273 56 aaKnown RBP1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 SOSTDC1Q6X4U4 206 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 Q6ZRX8 168 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 SSBP3-AS1Q7Z2R9 100 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 C3orf22Q8N5N4 141 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 SMCR5Q8TEV8 140 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 PMCHL2Q9BQD1 86 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 MIEN1Q9BRT3 115 aa1.9□□□□□ -2.11
CKS1BP3-201ENST00000600888 A6NDN8 102 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 NCR3O14931 201 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 SPINK1P00995 79 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 C3orf79P0CE67 100 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 AKR1D1P51857 326 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 JOSD1Q15040 202 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 Q5W150 140 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 DAND5Q8N907 189 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 LINC00308Q8TCZ7 52 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 Q9BRP9 147 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 SPANXCQ9NY87 97 aa1.89□□□□□ -2.11
CKS1BP3-201ENST00000600888 TRAV23DV6A0A075B6W5 121 aa1.88□□□□□ -2.11
CKS1BP3-201ENST00000600888 ZNF73O43830 326 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP3-201ENST00000600888 ERC2-IT1O76042 136 aa1.88□□□□□ -2.11
CKS1BP3-201ENST00000600888 SPRR1BP22528 89 aa1.88□□□□□ -2.11
CKS1BP3-201ENST00000600888 S100A7L2Q5SY68 101 aa1.88□□□□□ -2.11
CKS1BP3-201ENST00000600888 SPANXDQ9BXN6 97 aa1.88□□□□□ -2.11
CKS1BP3-201ENST00000600888 TRBV7-6A0A0J9YX20 115 aa1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 A0A0U1RQV1 116 aa1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 ZNF815PA8K554 130 aa1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 IFITM1P13164 125 aa1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 HINT1P49773 126 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 ELOF1P60002 83 aaKnown RBP1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 SLC25A34Q6PIV7 304 aa1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 COPS9Q8WXC6 57 aa1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 RETNLBQ9BQ08 111 aa1.87□□□□□ -2.11
CKS1BP3-201ENST00000600888 C20orf202A1L168 122 aa1.86□□□□□ -2.11
CKS1BP3-201ENST00000600888 SLC25A20O43772 301 aa1.86□□□□□ -2.11
CKS1BP3-201ENST00000600888 S100A1P23297 94 aa1.86□□□□□ -2.11
CKS1BP3-201ENST00000600888 KRTDAPP60985 99 aa1.86□□□□□ -2.11
CKS1BP3-201ENST00000600888 NPC2P61916 151 aa1.86□□□□□ -2.11
CKS1BP3-201ENST00000600888 TTTY13Q9BZ97 58 aa1.86□□□□□ -2.11
CKS1BP3-201ENST00000600888 IGLV5-48A0A075B6I7 105 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 COX7BP24311 80 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 CD164Q04900 197 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 ASB16-AS1Q495Z4 193 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 C6orf99Q4VX62 202 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 Q5XG85 94 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 SCGB1D4Q6XE38 83 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 HIST3H2BBQ8N257 126 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 ST20-AS1Q8NBB2 130 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 OR13C6PQ8NH95 151 aa1.85□□□□□ -2.11
CKS1BP3-201ENST00000600888 TRAV13-2A0A0B4J235 113 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 TEX49A0A1B0GTD5 131 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 S100A6P06703 90 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 C9orf153Q5TBE3 101 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 MUSTN1Q8IVN3 82 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 HIST1H2BLQ99880 126 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 LIMD2Q9BT23 127 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 CRCT1Q9UGL9 99 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 LAMTOR3Q9UHA4 124 aa1.84□□□□□ -2.11
CKS1BP3-201ENST00000600888 MUC17Q685J3 4493 aa1.83□□□□□ -2.12
CKS1BP3-201ENST00000600888 S100A2P29034 98 aa1.83□□□□□ -2.12
CKS1BP3-201ENST00000600888 TAL2Q16559 108 aa1.83□□□□□ -2.12
CKS1BP3-201ENST00000600888 ATOH7Q8N100 152 aa1.83□□□□□ -2.12
CKS1BP3-201ENST00000600888 PRO1933Q9H354 126 aa1.83□□□□□ -2.12
CKS1BP3-201ENST00000600888 NHP2Q9NX24 153 aaKnown RBP1.83□□□□□ -2.12
CKS1BP3-201ENST00000600888 DLEU1O43261 78 aa1.82□□□□□ -2.12
CKS1BP3-201ENST00000600888 SMIM11BQ8TCY0 68 aa1.82□□□□□ -2.12
CKS1BP3-201ENST00000600888 H7C2G1 150 aa1.81□□□□□ -2.12
CKS1BP3-201ENST00000600888 COX8AP10176 69 aa1.81□□□□□ -2.12
CKS1BP3-201ENST00000600888 LINC00575Q6W349 94 aa1.81□□□□□ -2.12
CKS1BP3-201ENST00000600888 PPDPFLQ8WWR9 84 aa1.81□□□□□ -2.12
CKS1BP3-201ENST00000600888 hADV29S1A0JD25 119 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms