RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 UBE2DNLQ8IWF7 75 aa12.69□□□□□ -0.38
SHKBP1-225ENST00000600733 DNAH7Q8WXX0 4024 aa12.69□□□□□ -0.38
SHKBP1-225ENST00000600733 KRTAP11-1Q8IUC1 163 aa12.68□□□□□ -0.38
SHKBP1-225ENST00000600733 DEFB116Q30KQ4 102 aa12.67□□□□□ -0.38
SHKBP1-225ENST00000600733 ATP5EP56381 51 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-225ENST00000600733 PHF5AQ7RTV0 110 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-225ENST00000600733 APLNQ9ULZ1 77 aa12.64□□□□□ -0.39
SHKBP1-225ENST00000600733 A0A087WSZ3 146 aa12.63□□□□□ -0.39
SHKBP1-225ENST00000600733 FP248Q71RG6 208 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-225ENST00000600733 IGLV8-61A0A075B6I0 122 aa12.62□□□□□ -0.39
SHKBP1-225ENST00000600733 LCE6AA0A183 80 aa12.61□□□□□ -0.39
SHKBP1-225ENST00000600733 UBE2AP49459 152 aa12.61□□□□□ -0.39
SHKBP1-225ENST00000600733 SMIM26A0A096LP01 95 aa12.6□□□□□ -0.39
SHKBP1-225ENST00000600733 HCG22E2RYF7 251 aa12.6□□□□□ -0.39
SHKBP1-225ENST00000600733 LINC00474Q9P2X8 69 aa12.6□□□□□ -0.39
SHKBP1-225ENST00000600733 C14orf177Q52M58 125 aa12.58□□□□□ -0.4
SHKBP1-225ENST00000600733 FAM229BQ4G0N7 80 aa12.55□□□□□ -0.4
SHKBP1-225ENST00000600733 RPL37AP61513 92 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-225ENST00000600733 WFDC13Q8IUB5 93 aa12.54□□□□□ -0.4
SHKBP1-225ENST00000600733 C9orf163Q8N9P6 203 aa12.54□□□□□ -0.4
SHKBP1-225ENST00000600733 DYNC2H1Q8NCM8 4307 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-225ENST00000600733 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
SHKBP1-225ENST00000600733 H0Y9J4 135 aa12.51□□□□□ -0.41
SHKBP1-225ENST00000600733 PANO1I0J062 215 aa12.51□□□□□ -0.41
SHKBP1-225ENST00000600733 PLECQ15149 4684 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-225ENST00000600733 ZCCHC13Q8WW36 166 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-225ENST00000600733 SPRR1BP22528 89 aa12.5□□□□□ -0.41
SHKBP1-225ENST00000600733 NBDYA0A0U1RRE5 68 aa12.48□□□□□ -0.41
SHKBP1-225ENST00000600733 Q6ZRN7 208 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-225ENST00000600733 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
SHKBP1-225ENST00000600733 MDFIQ99750 246 aa12.44□□□□□ -0.42
SHKBP1-225ENST00000600733 LINC00336Q6ZUF6 198 aa12.43□□□□□ -0.42
SHKBP1-225ENST00000600733 MPLKIPQ8TAP9 179 aa12.43□□□□□ -0.42
SHKBP1-225ENST00000600733 KRTAP29-1A8MX34 341 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-225ENST00000600733 LINC00472Q9H8W2 130 aa12.41□□□□□ -0.42
SHKBP1-225ENST00000600733 KRTAP13-1Q8IUC0 172 aa12.4□□□□□ -0.42
SHKBP1-225ENST00000600733 PRR15Q8IV56 129 aa12.4□□□□□ -0.42
SHKBP1-225ENST00000600733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-225ENST00000600733 CASC2Q6XLA1 102 aa12.38□□□□□ -0.43
SHKBP1-225ENST00000600733 hDV103S1A0JD37 113 aa12.37□□□□□ -0.43
SHKBP1-225ENST00000600733 A8MWP4 228 aa12.37□□□□□ -0.43
SHKBP1-225ENST00000600733 PRR4Q16378 134 aa12.37□□□□□ -0.43
SHKBP1-225ENST00000600733 PKIGQ9Y2B9 76 aa12.37□□□□□ -0.43
SHKBP1-225ENST00000600733 C1orf64Q8NEQ6 169 aa12.37□□□□□ -0.43
SHKBP1-225ENST00000600733 NUPR2A6NF83 97 aa12.36□□□□□ -0.43
SHKBP1-225ENST00000600733 MP68P56378 58 aa12.35□□□□□ -0.43
SHKBP1-225ENST00000600733 SPACA4Q8TDM5 124 aa12.34□□□□□ -0.43
SHKBP1-225ENST00000600733 LINC00208Q96KT6 92 aa12.34□□□□□ -0.43
SHKBP1-225ENST00000600733 STARD9Q9P2P6 4700 aa12.33□□□□□ -0.43
SHKBP1-225ENST00000600733 IGLV9-49A0A0B4J1Y8 123 aa12.32□□□□□ -0.44
SHKBP1-225ENST00000600733 TRAV22A0A0B4J277 110 aa12.3□□□□□ -0.44
SHKBP1-225ENST00000600733 H0Y9P7 68 aa12.29□□□□□ -0.44
SHKBP1-225ENST00000600733 NDUFB1O75438 58 aa12.28□□□□□ -0.44
SHKBP1-225ENST00000600733 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
SHKBP1-225ENST00000600733 HECTD4Q9Y4D8 3996 aa12.27□□□□□ -0.44
SHKBP1-225ENST00000600733 CYP4F30PQ9H0H9 118 aa12.27□□□□□ -0.45
SHKBP1-225ENST00000600733 PRO0628Q9UI54 55 aa12.27□□□□□ -0.45
SHKBP1-225ENST00000600733 A0A087WTM6 91 aa12.26□□□□□ -0.45
SHKBP1-225ENST00000600733 MMP24-AS1A0A0U1RRL7 71 aa12.25□□□□□ -0.45
SHKBP1-225ENST00000600733 FRAS1Q86XX4 4008 aa12.24□□□□□ -0.45
SHKBP1-225ENST00000600733 PRKDCP78527 4128 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-225ENST00000600733 Q96NJ1 140 aa12.23□□□□□ -0.45
SHKBP1-225ENST00000600733 KMT2AQ03164 3969 aa12.22□□□□□ -0.45
SHKBP1-225ENST00000600733 BRK1Q8WUW1 75 aa12.21□□□□□ -0.45
SHKBP1-225ENST00000600733 LINC00483Q53H64 154 aa12.21□□□□□ -0.46
SHKBP1-225ENST00000600733 PSORS1C2Q9UIG4 136 aa12.2□□□□□ -0.46
SHKBP1-225ENST00000600733 RTL8CO15255 209 aa12.2□□□□□ -0.46
SHKBP1-225ENST00000600733 MOBPQ13875 183 aa12.19□□□□□ -0.46
SHKBP1-225ENST00000600733 ANAPC11Q9NYG5 84 aa12.19□□□□□ -0.46
SHKBP1-225ENST00000600733 H3BPC8 53 aa12.18□□□□□ -0.46
SHKBP1-225ENST00000600733 DNAH2Q9P225 4427 aa12.17□□□□□ -0.46
SHKBP1-225ENST00000600733 IGLV5-52A0A0A0MRZ9 124 aa12.17□□□□□ -0.46
SHKBP1-225ENST00000600733 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
SHKBP1-225ENST00000600733 DNAH8Q96JB1 4490 aa12.15□□□□□ -0.46
SHKBP1-225ENST00000600733 FBN3Q75N90 2809 aa12.15□□□□□ -0.46
SHKBP1-225ENST00000600733 Q1T7F1 81 aa12.15□□□□□ -0.46
SHKBP1-225ENST00000600733 ZNF706Q9Y5V0 76 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-225ENST00000600733 TGP01266 2768 aa12.13□□□□□ -0.47
SHKBP1-225ENST00000600733 SPANXA2-OT1Q8N9U9 137 aa12.12□□□□□ -0.47
SHKBP1-225ENST00000600733 ASB16-AS1Q495Z4 193 aa12.11□□□□□ -0.47
SHKBP1-225ENST00000600733 PLAC8Q9NZF1 115 aa12.11□□□□□ -0.47
SHKBP1-225ENST00000600733 MEGF8Q7Z7M0 2845 aa12.1□□□□□ -0.47
SHKBP1-225ENST00000600733 ZNF861PO60384 105 aa12.09□□□□□ -0.47
SHKBP1-225ENST00000600733 Q6ZR54 194 aa12.09□□□□□ -0.47
SHKBP1-225ENST00000600733 C8orf17Q9NRJ1 99 aa12.09□□□□□ -0.47
SHKBP1-225ENST00000600733 IGHV6-1A0A0B4J1U7 121 aa12.09□□□□□ -0.47
SHKBP1-225ENST00000600733 DNAH17Q9UFH2 4485 aa12.09□□□□□ -0.47
SHKBP1-225ENST00000600733 PSPHP1O15172 72 aa12.08□□□□□ -0.48
SHKBP1-225ENST00000600733 A0A1B0GVX0 72 aa12.06□□□□□ -0.48
SHKBP1-225ENST00000600733 TP53AIP1Q9HCN2 124 aa12.03□□□□□ -0.48
SHKBP1-225ENST00000600733 NDUFS5O43920 106 aa12.02□□□□□ -0.49
SHKBP1-225ENST00000600733 PCOTHQ58A44 107 aa12.02□□□□□ -0.49
SHKBP1-225ENST00000600733 A0A087X002 238 aa12.02□□□□□ -0.49
SHKBP1-225ENST00000600733 NOTCH2NLQ7Z3S9 236 aa12.02□□□□□ -0.49
SHKBP1-225ENST00000600733 CDK2AP2O75956 126 aa12□□□□□ -0.49
SHKBP1-225ENST00000600733 C1orf134Q5TEV5 83 aa11.98□□□□□ -0.49
SHKBP1-225ENST00000600733 IGLV7-46A0A075B6I9 117 aa11.97□□□□□ -0.49
SHKBP1-225ENST00000600733 A8MUN3 132 aa11.97□□□□□ -0.49
SHKBP1-225ENST00000600733 CD164Q04900 197 aa11.97□□□□□ -0.49
SHKBP1-225ENST00000600733 MRPL34Q9BQ48 92 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms