RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 A0A0G2JQZ4 141 aa9.87□□□□□ -0.83
IRF3-219ENST00000597636 A0A1W2PNN7 141 aa9.87□□□□□ -0.83
IRF3-219ENST00000597636 MP68P56378 58 aa9.87□□□□□ -0.83
IRF3-219ENST00000597636 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
IRF3-219ENST00000597636 DEFB116Q30KQ4 102 aa9.86□□□□□ -0.83
IRF3-219ENST00000597636 WFDC13Q8IUB5 93 aa9.86□□□□□ -0.83
IRF3-219ENST00000597636 IGFL1Q6UW32 110 aa9.85□□□□□ -0.83
IRF3-219ENST00000597636 DNAH10OSP0CZ25 163 aa9.85□□□□□ -0.83
IRF3-219ENST00000597636 A8MUN3 132 aa9.84□□□□□ -0.83
IRF3-219ENST00000597636 REG3GQ6UW15 175 aa9.83□□□□□ -0.84
IRF3-219ENST00000597636 LINC00208Q96KT6 92 aa9.83□□□□□ -0.84
IRF3-219ENST00000597636 B9D2Q9BPU9 175 aa9.83□□□□□ -0.84
IRF3-219ENST00000597636 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
IRF3-219ENST00000597636 DEFB131BA0A096LNP1 70 aa9.82□□□□□ -0.84
IRF3-219ENST00000597636 COL7A1Q02388 2944 aa9.81□□□□□ -0.84
IRF3-219ENST00000597636 A0A087WSZ3 146 aa9.81□□□□□ -0.84
IRF3-219ENST00000597636 KRTAP29-1A8MX34 341 aaPredicted RBP9.8□□□□□ -0.84
IRF3-219ENST00000597636 STAB2Q8WWQ8 2551 aa9.8□□□□□ -0.84
IRF3-219ENST00000597636 DNHD1Q96M86 4753 aa9.8□□□□□ -0.84
IRF3-219ENST00000597636 SPANXA2-OT1Q8N9U9 137 aa9.79□□□□□ -0.84
IRF3-219ENST00000597636 IGLV8-61A0A075B6I0 122 aa9.78□□□□□ -0.84
IRF3-219ENST00000597636 Q5VV11 94 aa9.78□□□□□ -0.84
IRF3-219ENST00000597636 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
IRF3-219ENST00000597636 H0Y9P7 68 aa9.77□□□□□ -0.85
IRF3-219ENST00000597636 H3BPC8 53 aa9.76□□□□□ -0.85
IRF3-219ENST00000597636 C11orf45Q8TAV5 145 aa9.75□□□□□ -0.85
IRF3-219ENST00000597636 CASC2Q6XLA1 102 aa9.75□□□□□ -0.85
IRF3-219ENST00000597636 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
IRF3-219ENST00000597636 A8MU10 97 aa9.74□□□□□ -0.85
IRF3-219ENST00000597636 K7EIL1 84 aa9.74□□□□□ -0.85
IRF3-219ENST00000597636 LINC00588Q9Y4M8 146 aa9.74□□□□□ -0.85
IRF3-219ENST00000597636 DNAH3Q8TD57 4116 aa9.74□□□□□ -0.85
IRF3-219ENST00000597636 PRLHP81277 87 aa9.73□□□□□ -0.85
IRF3-219ENST00000597636 TENM2Q9NT68 2774 aa9.73□□□□□ -0.85
IRF3-219ENST00000597636 LIMD2Q9BT23 127 aa9.73□□□□□ -0.85
IRF3-219ENST00000597636 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.85
IRF3-219ENST00000597636 CHKB-CPT1BH3BT56 60 aa9.7□□□□□ -0.86
IRF3-219ENST00000597636 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
IRF3-219ENST00000597636 UBE2AP49459 152 aa9.69□□□□□ -0.86
IRF3-219ENST00000597636 A8MWP4 228 aa9.68□□□□□ -0.86
IRF3-219ENST00000597636 PRR15LQ9BU68 103 aa9.67□□□□□ -0.86
IRF3-219ENST00000597636 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
IRF3-219ENST00000597636 HUWE1Q7Z6Z7 4374 aaKnown RBP9.67□□□□□ -0.86
IRF3-219ENST00000597636 LYSTQ99698 3801 aa9.65□□□□□ -0.86
IRF3-219ENST00000597636 A0A096LNI7 61 aa9.65□□□□□ -0.87
IRF3-219ENST00000597636 C16orf90A8MZG2 172 aa9.65□□□□□ -0.87
IRF3-219ENST00000597636 CSMD3Q7Z407 3707 aa9.64□□□□□ -0.87
IRF3-219ENST00000597636 DNAH1Q9P2D7 4330 aa9.63□□□□□ -0.87
IRF3-219ENST00000597636 TGP01266 2768 aa9.63□□□□□ -0.87
IRF3-219ENST00000597636 IGKV2-24A0A0C4DH68 120 aa9.63□□□□□ -0.87
IRF3-219ENST00000597636 SPRR1BP22528 89 aa9.61□□□□□ -0.87
IRF3-219ENST00000597636 COA5Q86WW8 74 aa9.61□□□□□ -0.87
IRF3-219ENST00000597636 MEGF8Q7Z7M0 2845 aa9.61□□□□□ -0.87
IRF3-219ENST00000597636 IGLV7-46A0A075B6I9 117 aa9.61□□□□□ -0.87
IRF3-219ENST00000597636 Q75L30 129 aa9.61□□□□□ -0.87
IRF3-219ENST00000597636 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
IRF3-219ENST00000597636 CD164Q04900 197 aa9.6□□□□□ -0.87
IRF3-219ENST00000597636 PRKDCP78527 4128 aaKnown RBP9.59□□□□□ -0.87
IRF3-219ENST00000597636 MMP24-AS1A0A0U1RRL7 71 aa9.59□□□□□ -0.87
IRF3-219ENST00000597636 LCA10Q71F78 164 aa9.58□□□□□ -0.88
IRF3-219ENST00000597636 H0Y9J4 135 aa9.58□□□□□ -0.88
IRF3-219ENST00000597636 KRTAP11-1Q8IUC1 163 aa9.57□□□□□ -0.88
IRF3-219ENST00000597636 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
IRF3-219ENST00000597636 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
IRF3-219ENST00000597636 A6NED7 52 aa9.56□□□□□ -0.88
IRF3-219ENST00000597636 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
IRF3-219ENST00000597636 DNAH9Q9NYC9 4486 aa9.56□□□□□ -0.88
IRF3-219ENST00000597636 KTN1-AS1Q86SY8 53 aa9.55□□□□□ -0.88
IRF3-219ENST00000597636 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
IRF3-219ENST00000597636 PCOTHQ58A44 107 aa9.52□□□□□ -0.89
IRF3-219ENST00000597636 TP53AIP1Q9HCN2 124 aa9.5□□□□□ -0.89
IRF3-219ENST00000597636 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
IRF3-219ENST00000597636 CHTF8P0CG12 524 aa9.49□□□□□ -0.89
IRF3-219ENST00000597636 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
IRF3-219ENST00000597636 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
IRF3-219ENST00000597636 A6NN06 94 aa9.47□□□□□ -0.89
IRF3-219ENST00000597636 KRTAP1-5Q9BYS1 174 aa9.47□□□□□ -0.89
IRF3-219ENST00000597636 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
IRF3-219ENST00000597636 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.89
IRF3-219ENST00000597636 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.89
IRF3-219ENST00000597636 Q6ZR54 194 aa9.46□□□□□ -0.9
IRF3-219ENST00000597636 MOBPQ13875 183 aa9.45□□□□□ -0.9
IRF3-219ENST00000597636 Q96NJ1 140 aa9.45□□□□□ -0.9
IRF3-219ENST00000597636 NDUFS5O43920 106 aa9.45□□□□□ -0.9
IRF3-219ENST00000597636 FBN3Q75N90 2809 aa9.45□□□□□ -0.9
IRF3-219ENST00000597636 C8orf17Q9NRJ1 99 aa9.43□□□□□ -0.9
IRF3-219ENST00000597636 DNAH10Q8IVF4 4471 aa9.43□□□□□ -0.9
IRF3-219ENST00000597636 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
IRF3-219ENST00000597636 HRES1P13985 223 aa9.4□□□□□ -0.91
IRF3-219ENST00000597636 KRTAP13-1Q8IUC0 172 aa9.4□□□□□ -0.91
IRF3-219ENST00000597636 C14orf177Q52M58 125 aa9.39□□□□□ -0.91
IRF3-219ENST00000597636 IGLV9-49A0A0B4J1Y8 123 aa9.38□□□□□ -0.91
IRF3-219ENST00000597636 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
IRF3-219ENST00000597636 IGHV6-1A0A0B4J1U7 121 aa9.36□□□□□ -0.91
IRF3-219ENST00000597636 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
IRF3-219ENST00000597636 SPINK7P58062 85 aa9.36□□□□□ -0.91
IRF3-219ENST00000597636 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
IRF3-219ENST00000597636 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.92
IRF3-219ENST00000597636 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.92
IRF3-219ENST00000597636 PANO1I0J062 215 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms