RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 A0A1B0GWB2 263 aa7.5□□□□□ -1.21
SHKBP1-208ENST00000595726 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-208ENST00000595726 Q8N377 158 aa7.5□□□□□ -1.21
SHKBP1-208ENST00000595726 VAMP8Q9BV40 100 aa7.5□□□□□ -1.21
SHKBP1-208ENST00000595726 SLC25A34Q6PIV7 304 aa7.48□□□□□ -1.21
SHKBP1-208ENST00000595726 SMIM11BQ8TCY0 68 aa7.48□□□□□ -1.21
SHKBP1-208ENST00000595726 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
SHKBP1-208ENST00000595726 A4D1N5 150 aa7.46□□□□□ -1.22
SHKBP1-208ENST00000595726 COX8AP10176 69 aa7.46□□□□□ -1.22
SHKBP1-208ENST00000595726 LAMTOR3Q9UHA4 124 aa7.46□□□□□ -1.22
SHKBP1-208ENST00000595726 TAL2Q16559 108 aa7.45□□□□□ -1.22
SHKBP1-208ENST00000595726 DEFB105AQ8NG35 78 aa7.45□□□□□ -1.22
SHKBP1-208ENST00000595726 PAM16Q9Y3D7 125 aa7.45□□□□□ -1.22
SHKBP1-208ENST00000595726 IGLV5-48A0A075B6I7 105 aa7.44□□□□□ -1.22
SHKBP1-208ENST00000595726 TEX49A0A1B0GTD5 131 aa7.44□□□□□ -1.22
SHKBP1-208ENST00000595726 Q1RN00 199 aa7.44□□□□□ -1.22
SHKBP1-208ENST00000595726 SPATA45Q537H7 98 aa7.44□□□□□ -1.22
SHKBP1-208ENST00000595726 DLEU1O43261 78 aa7.43□□□□□ -1.22
SHKBP1-208ENST00000595726 SLC25A20O43772 301 aa7.43□□□□□ -1.22
SHKBP1-208ENST00000595726 TSTD3H0UI37 97 aa7.42□□□□□ -1.22
SHKBP1-208ENST00000595726 SMIM29Q86T20 159 aa7.42□□□□□ -1.22
SHKBP1-208ENST00000595726 HIST1H4GQ99525 98 aa7.42□□□□□ -1.22
SHKBP1-208ENST00000595726 NHP2Q9NX24 153 aaKnown RBP7.42□□□□□ -1.22
SHKBP1-208ENST00000595726 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
SHKBP1-208ENST00000595726 HRCT1Q6UXD1 115 aa7.4□□□□□ -1.22
SHKBP1-208ENST00000595726 C14orf144Q96I85 54 aa7.4□□□□□ -1.22
SHKBP1-208ENST00000595726 C9orf92A6NGG3 77 aa7.39□□□□□ -1.23
SHKBP1-208ENST00000595726 VAMP3Q15836 100 aa7.39□□□□□ -1.23
SHKBP1-208ENST00000595726 LINC00575Q6W349 94 aa7.38□□□□□ -1.23
SHKBP1-208ENST00000595726 LIMD2Q9BT23 127 aa7.38□□□□□ -1.23
SHKBP1-208ENST00000595726 PRO1933Q9H354 126 aa7.38□□□□□ -1.23
SHKBP1-208ENST00000595726 UQCR10Q9UDW1 63 aa7.38□□□□□ -1.23
SHKBP1-208ENST00000595726 C2orf91Q6ZV80 131 aa7.37□□□□□ -1.23
SHKBP1-208ENST00000595726 HIGD1BQ9P298 99 aa7.37□□□□□ -1.23
SHKBP1-208ENST00000595726 CD164Q04900 197 aa7.36□□□□□ -1.23
SHKBP1-208ENST00000595726 hADV29S1A0JD25 119 aa7.35□□□□□ -1.23
SHKBP1-208ENST00000595726 Q6ZQY7 126 aa7.35□□□□□ -1.23
SHKBP1-208ENST00000595726 H7C2G1 150 aa7.34□□□□□ -1.23
SHKBP1-208ENST00000595726 CFC1P0CG37 223 aa7.34□□□□□ -1.23
SHKBP1-208ENST00000595726 BVES-AS1Q5T3Y7 98 aa7.34□□□□□ -1.23
SHKBP1-208ENST00000595726 A0A0G2JQZ4 141 aa7.33□□□□□ -1.24
SHKBP1-208ENST00000595726 A0A0B4J2C4 111 aa7.32□□□□□ -1.24
SHKBP1-208ENST00000595726 Q5XG85 94 aa7.31□□□□□ -1.24
SHKBP1-208ENST00000595726 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
SHKBP1-208ENST00000595726 PCP4L1A6NKN8 68 aa7.3□□□□□ -1.24
SHKBP1-208ENST00000595726 F8WEM9 126 aa7.3□□□□□ -1.24
SHKBP1-208ENST00000595726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
SHKBP1-208ENST00000595726 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
SHKBP1-208ENST00000595726 CEND1Q8N111 149 aa7.3□□□□□ -1.24
SHKBP1-208ENST00000595726 FXYD2P54710 66 aa7.27□□□□□ -1.25
SHKBP1-208ENST00000595726 PPDPFLQ8WWR9 84 aa7.27□□□□□ -1.25
SHKBP1-208ENST00000595726 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
SHKBP1-208ENST00000595726 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
SHKBP1-208ENST00000595726 Q6JHZ5 121 aa7.25□□□□□ -1.25
SHKBP1-208ENST00000595726 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
SHKBP1-208ENST00000595726 CLEC2BQ92478 149 aa7.25□□□□□ -1.25
SHKBP1-208ENST00000595726 FAM218AQ96MZ4 157 aa7.25□□□□□ -1.25
SHKBP1-208ENST00000595726 H0YGX0 51 aa7.24□□□□□ -1.25
SHKBP1-208ENST00000595726 M0R143 59 aa7.24□□□□□ -1.25
SHKBP1-208ENST00000595726 HSD52Q0P140 79 aa7.24□□□□□ -1.25
SHKBP1-208ENST00000595726 PRO1854Q9UHT4 67 aa7.24□□□□□ -1.25
SHKBP1-208ENST00000595726 OCIAD2Q56VL3 154 aa7.23□□□□□ -1.25
SHKBP1-208ENST00000595726 Q6Q795 121 aa7.23□□□□□ -1.25
SHKBP1-208ENST00000595726 TCL1BO95988 128 aa7.22□□□□□ -1.25
SHKBP1-208ENST00000595726 SNHG12Q9BXW3 62 aa7.22□□□□□ -1.25
SHKBP1-208ENST00000595726 TRBV7-7A0A0K0K1E9 115 aa7.2□□□□□ -1.26
SHKBP1-208ENST00000595726 H3BUT2 72 aa7.2□□□□□ -1.26
SHKBP1-208ENST00000595726 TRIAP1O43715 76 aa7.2□□□□□ -1.26
SHKBP1-208ENST00000595726 SNCGO76070 127 aa7.2□□□□□ -1.26
SHKBP1-208ENST00000595726 A0A1B0GX51 115 aa7.19□□□□□ -1.26
SHKBP1-208ENST00000595726 LCE2BO14633 110 aa7.19□□□□□ -1.26
SHKBP1-208ENST00000595726 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
SHKBP1-208ENST00000595726 K7ERJ3 54 aa7.18□□□□□ -1.26
SHKBP1-208ENST00000595726 H3BS24 57 aa7.17□□□□□ -1.26
SHKBP1-208ENST00000595726 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
SHKBP1-208ENST00000595726 BATFQ16520 125 aa7.16□□□□□ -1.26
SHKBP1-208ENST00000595726 PSMB2P49721 201 aa7.13□□□□□ -1.27
SHKBP1-208ENST00000595726 COL5A1-AS1Q5SY13 56 aa7.13□□□□□ -1.27
SHKBP1-208ENST00000595726 FABP2P12104 132 aa7.12□□□□□ -1.27
SHKBP1-208ENST00000595726 H3BMG7 143 aa7.11□□□□□ -1.27
SHKBP1-208ENST00000595726 DNAL4O96015 105 aa7.11□□□□□ -1.27
SHKBP1-208ENST00000595726 TEN1Q86WV5 123 aa7.11□□□□□ -1.27
SHKBP1-208ENST00000595726 MT2AP02795 61 aa7.1□□□□□ -1.27
SHKBP1-208ENST00000595726 SS18L2Q9UHA2 77 aa7.1□□□□□ -1.27
SHKBP1-208ENST00000595726 NEBP20929 6669 aa7.1□□□□□ -1.27
SHKBP1-208ENST00000595726 LST1O00453 97 aa7.09□□□□□ -1.27
SHKBP1-208ENST00000595726 COX6CP09669 75 aa7.09□□□□□ -1.27
SHKBP1-208ENST00000595726 ORMDL1Q9P0S3 153 aa7.09□□□□□ -1.27
SHKBP1-208ENST00000595726 A0A087WSZ3 146 aa7.07□□□□□ -1.28
SHKBP1-208ENST00000595726 H3BQ85 93 aa7.06□□□□□ -1.28
SHKBP1-208ENST00000595726 A0A1W2PNM2 257 aa7.05□□□□□ -1.28
SHKBP1-208ENST00000595726 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
SHKBP1-208ENST00000595726 MT1FP04733 61 aa7.05□□□□□ -1.28
SHKBP1-208ENST00000595726 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
SHKBP1-208ENST00000595726 A0A1B0GV72 72 aa7.04□□□□□ -1.28
SHKBP1-208ENST00000595726 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
SHKBP1-208ENST00000595726 Q96NJ1 140 aa7.04□□□□□ -1.28
SHKBP1-208ENST00000595726 TRACP01848 142 aa7.03□□□□□ -1.28
SHKBP1-208ENST00000595726 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
SHKBP1-208ENST00000595726 TAX1BP3O14907 124 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms