RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
MBD1-227ENST00000592060 BPY2O14599 106 aa9.77□□□□□ -0.84
MBD1-227ENST00000592060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.77□□□□□ -0.84
MBD1-227ENST00000592060 SPRR1BP22528 89 aa9.77□□□□□ -0.85
MBD1-227ENST00000592060 IGFL1Q6UW32 110 aa9.77□□□□□ -0.85
MBD1-227ENST00000592060 Q8N9L7 120 aa9.77□□□□□ -0.85
MBD1-227ENST00000592060 TRAV7A0A075B6U4 112 aa9.76□□□□□ -0.85
MBD1-227ENST00000592060 KRTAP13-1Q8IUC0 172 aa9.75□□□□□ -0.85
MBD1-227ENST00000592060 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
MBD1-227ENST00000592060 SMIM20Q8N5G0 67 aa9.74□□□□□ -0.85
MBD1-227ENST00000592060 A0A0G2JQZ4 141 aa9.74□□□□□ -0.85
MBD1-227ENST00000592060 UBE2AP49459 152 aa9.74□□□□□ -0.85
MBD1-227ENST00000592060 RTL8CO15255 209 aa9.72□□□□□ -0.85
MBD1-227ENST00000592060 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
MBD1-227ENST00000592060 RYR3Q15413 4870 aa9.7□□□□□ -0.86
MBD1-227ENST00000592060 DPH3Q96FX2 82 aa9.7□□□□□ -0.86
MBD1-227ENST00000592060 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
MBD1-227ENST00000592060 KMT2AQ03164 3969 aa9.68□□□□□ -0.86
MBD1-227ENST00000592060 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
MBD1-227ENST00000592060 DSCR10P59022 87 aa9.68□□□□□ -0.86
MBD1-227ENST00000592060 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
MBD1-227ENST00000592060 C20orf197Q8N268 126 aa9.67□□□□□ -0.86
MBD1-227ENST00000592060 TMEM258P61165 79 aa9.66□□□□□ -0.86
MBD1-227ENST00000592060 C1orf134Q5TEV5 83 aa9.66□□□□□ -0.86
MBD1-227ENST00000592060 PLAC8Q9NZF1 115 aa9.64□□□□□ -0.87
MBD1-227ENST00000592060 A0A087WSZ3 146 aa9.63□□□□□ -0.87
MBD1-227ENST00000592060 OCR1Q9BZK8 76 aa9.63□□□□□ -0.87
MBD1-227ENST00000592060 K7EQZ3 153 aa9.62□□□□□ -0.87
MBD1-227ENST00000592060 KLKP1Q107X0 134 aa9.62□□□□□ -0.87
MBD1-227ENST00000592060 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
MBD1-227ENST00000592060 LY6G6CO95867 125 aa9.61□□□□□ -0.87
MBD1-227ENST00000592060 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
MBD1-227ENST00000592060 LINC00483Q53H64 154 aa9.58□□□□□ -0.88
MBD1-227ENST00000592060 H7BZZ5 65 aa9.57□□□□□ -0.88
MBD1-227ENST00000592060 SNURFQ9Y675 71 aa9.57□□□□□ -0.88
MBD1-227ENST00000592060 ALMS1Q8TCU4 4167 aa9.57□□□□□ -0.88
MBD1-227ENST00000592060 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
MBD1-227ENST00000592060 DEFB116Q30KQ4 102 aa9.55□□□□□ -0.88
MBD1-227ENST00000592060 DNAH8Q96JB1 4490 aa9.55□□□□□ -0.88
MBD1-227ENST00000592060 TMEM254Q8TBM7 123 aa9.54□□□□□ -0.88
MBD1-227ENST00000592060 WWC2-AS2Q96NR7 200 aa9.54□□□□□ -0.88
MBD1-227ENST00000592060 ZNF706Q9Y5V0 76 aaPredicted RBP9.53□□□□□ -0.88
MBD1-227ENST00000592060 HCG22E2RYF7 251 aa9.52□□□□□ -0.89
MBD1-227ENST00000592060 LINC00472Q9H8W2 130 aa9.52□□□□□ -0.89
MBD1-227ENST00000592060 ZNF861PO60384 105 aa9.52□□□□□ -0.89
MBD1-227ENST00000592060 IGLV9-49A0A0B4J1Y8 123 aa9.51□□□□□ -0.89
MBD1-227ENST00000592060 J3KT08 172 aa9.51□□□□□ -0.89
MBD1-227ENST00000592060 RPS28P62857 69 aaKnown RBP9.51□□□□□ -0.89
MBD1-227ENST00000592060 FAM30AQ9NZY2 134 aa9.51□□□□□ -0.89
MBD1-227ENST00000592060 FRAS1Q86XX4 4008 aa9.51□□□□□ -0.89
MBD1-227ENST00000592060 A0A0U1RQV1 116 aa9.5□□□□□ -0.89
MBD1-227ENST00000592060 LCE6AA0A183 80 aa9.5□□□□□ -0.89
MBD1-227ENST00000592060 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
MBD1-227ENST00000592060 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
MBD1-227ENST00000592060 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
MBD1-227ENST00000592060 NDUFC1O43677 76 aa9.48□□□□□ -0.89
MBD1-227ENST00000592060 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
MBD1-227ENST00000592060 DNAH11Q96DT5 4516 aa9.47□□□□□ -0.89
MBD1-227ENST00000592060 A8MWP4 228 aa9.46□□□□□ -0.9
MBD1-227ENST00000592060 IGLV7-43P04211 117 aa9.45□□□□□ -0.9
MBD1-227ENST00000592060 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
MBD1-227ENST00000592060 DNAH5Q8TE73 4624 aa9.45□□□□□ -0.9
MBD1-227ENST00000592060 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
MBD1-227ENST00000592060 OXTP01178 125 aa9.44□□□□□ -0.9
MBD1-227ENST00000592060 MOBPQ13875 183 aa9.43□□□□□ -0.9
MBD1-227ENST00000592060 WFDC13Q8IUB5 93 aa9.43□□□□□ -0.9
MBD1-227ENST00000592060 Q96NJ1 140 aa9.43□□□□□ -0.9
MBD1-227ENST00000592060 ANAPC11Q9NYG5 84 aa9.43□□□□□ -0.9
MBD1-227ENST00000592060 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
MBD1-227ENST00000592060 Q6ZSA8 131 aa9.4□□□□□ -0.9
MBD1-227ENST00000592060 BIRC6Q9NR09 4857 aa9.4□□□□□ -0.91
MBD1-227ENST00000592060 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
MBD1-227ENST00000592060 ZCCHC13Q8WW36 166 aaKnown RBP9.39□□□□□ -0.91
MBD1-227ENST00000592060 CASC2Q6XLA1 102 aa9.38□□□□□ -0.91
MBD1-227ENST00000592060 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
MBD1-227ENST00000592060 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
MBD1-227ENST00000592060 PKD1P98161 4303 aa9.37□□□□□ -0.91
MBD1-227ENST00000592060 ATP5EP56381 51 aaPredicted RBP9.37□□□□□ -0.91
MBD1-227ENST00000592060 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
MBD1-227ENST00000592060 FAT2Q9NYQ8 4349 aa9.36□□□□□ -0.91
MBD1-227ENST00000592060 SACSQ9NZJ4 4579 aa9.36□□□□□ -0.91
MBD1-227ENST00000592060 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
MBD1-227ENST00000592060 SERP1Q9Y6X1 66 aa9.36□□□□□ -0.91
MBD1-227ENST00000592060 RYR2Q92736 4967 aa9.35□□□□□ -0.91
MBD1-227ENST00000592060 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
MBD1-227ENST00000592060 NDUFB1O75438 58 aa9.32□□□□□ -0.92
MBD1-227ENST00000592060 ASB16-AS1Q495Z4 193 aa9.3□□□□□ -0.92
MBD1-227ENST00000592060 KRTAP17-1Q9BYP8 105 aa9.3□□□□□ -0.92
MBD1-227ENST00000592060 hDV103S1A0JD37 113 aa9.28□□□□□ -0.92
MBD1-227ENST00000592060 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
MBD1-227ENST00000592060 CD164Q04900 197 aa9.26□□□□□ -0.93
MBD1-227ENST00000592060 C8orf17Q9NRJ1 99 aa9.26□□□□□ -0.93
MBD1-227ENST00000592060 MP68P56378 58 aa9.26□□□□□ -0.93
MBD1-227ENST00000592060 SSBP3-AS1Q7Z2R9 100 aa9.26□□□□□ -0.93
MBD1-227ENST00000592060 H0Y9P7 68 aa9.24□□□□□ -0.93
MBD1-227ENST00000592060 H3BPC8 53 aa9.23□□□□□ -0.93
MBD1-227ENST00000592060 Q5XG85 94 aa9.23□□□□□ -0.93
MBD1-227ENST00000592060 A0A087X002 238 aa9.22□□□□□ -0.93
MBD1-227ENST00000592060 IGHV6-1A0A0B4J1U7 121 aa9.22□□□□□ -0.93
MBD1-227ENST00000592060 TRAV22A0A0B4J277 110 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 239.6 ms