RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 FAM236AA0A1B0GUQ0 79 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 FAM236BA0A1B0GV22 79 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 IGIPA6NJ69 53 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 CCDC179H3BU77 68 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 IGKV2D-28P01615 120 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 NMUP48645 174 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 NDUFA6P56556 154 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 ZC2HC1BQ5TFG8 222 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 ADM2Q7Z4H4 148 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
DNMT1-220ENST00000589351 H3BRM9 83 aa3.18□□□□□ -1.9
DNMT1-220ENST00000589351 J3QR89 54 aa3.18□□□□□ -1.9
DNMT1-220ENST00000589351 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
DNMT1-220ENST00000589351 KRTAP13-1Q8IUC0 172 aa3.18□□□□□ -1.9
DNMT1-220ENST00000589351 DAND5Q8N907 189 aa3.18□□□□□ -1.9
DNMT1-220ENST00000589351 SCGB3A1Q96QR1 104 aa3.18□□□□□ -1.9
DNMT1-220ENST00000589351 NDUFA12Q9UI09 145 aa3.18□□□□□ -1.9
DNMT1-220ENST00000589351 TMEM218A2RU14 115 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 TMEM256-PLSCR3K7ERE1 68 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 SPINK1P00995 79 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST1H2BOP23527 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST1H2BBP33778 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST1H2BDP58876 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST1H2BCP62807 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 PRLHP81277 87 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 COX17Q14061 63 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST2H2BEQ16778 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST1H2BHQ93079 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST1H2BNQ99877 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIST1H2BMQ99879 126 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
DNMT1-220ENST00000589351 SCO1O75880 301 aa3.16□□□□□ -1.9
DNMT1-220ENST00000589351 ASB16-AS1Q495Z4 193 aa3.16□□□□□ -1.9
DNMT1-220ENST00000589351 LINC01554Q52M75 96 aa3.16□□□□□ -1.9
DNMT1-220ENST00000589351 SFTA2Q6UW10 78 aa3.16□□□□□ -1.9
DNMT1-220ENST00000589351 BRK1Q8WUW1 75 aa3.16□□□□□ -1.9
DNMT1-220ENST00000589351 BPY2O14599 106 aa3.15□□□□□ -1.91
DNMT1-220ENST00000589351 SPINK8P0C7L1 97 aa3.15□□□□□ -1.91
DNMT1-220ENST00000589351 MEIG1Q5JSS6 88 aa3.15□□□□□ -1.91
DNMT1-220ENST00000589351 FAM19A2Q8N3H0 131 aa3.15□□□□□ -1.91
DNMT1-220ENST00000589351 FABP2P12104 132 aa3.14□□□□□ -1.91
DNMT1-220ENST00000589351 HSD52Q0P140 79 aa3.14□□□□□ -1.91
DNMT1-220ENST00000589351 SMCO4Q9NRQ5 59 aa3.14□□□□□ -1.91
DNMT1-220ENST00000589351 CRCT1Q9UGL9 99 aa3.14□□□□□ -1.91
DNMT1-220ENST00000589351 H3BMG7 143 aa3.13□□□□□ -1.91
DNMT1-220ENST00000589351 K7ERJ3 54 aa3.13□□□□□ -1.91
DNMT1-220ENST00000589351 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
DNMT1-220ENST00000589351 LINC00158P58513 81 aa3.13□□□□□ -1.91
DNMT1-220ENST00000589351 Q1RN00 199 aa3.13□□□□□ -1.91
DNMT1-220ENST00000589351 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
DNMT1-220ENST00000589351 SPRR4Q96PI1 79 aa3.13□□□□□ -1.91
DNMT1-220ENST00000589351 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
DNMT1-220ENST00000589351 ETDCA0A1B0GVM5 59 aa3.12□□□□□ -1.91
DNMT1-220ENST00000589351 TSPEAR-AS2P59090 65 aa3.12□□□□□ -1.91
DNMT1-220ENST00000589351 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
DNMT1-220ENST00000589351 SSBP3-AS1Q7Z2R9 100 aa3.12□□□□□ -1.91
DNMT1-220ENST00000589351 ZNF625Q96I27 306 aaPredicted RBP3.12□□□□□ -1.91
DNMT1-220ENST00000589351 A0A1B0GW54 56 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 A8MWP4 228 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 LEPROTO15243 131 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 SLC25A20O43772 301 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 CFC1P0CG37 223 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 ADCYAP1P18509 176 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 COL5A1-AS1Q5SY13 56 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 PCP2Q8IVA1 136 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 SMCR5Q8TEV8 140 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 TTTY13Q9BZ97 58 aa3.11□□□□□ -1.91
DNMT1-220ENST00000589351 LINC01546A6NGU7 62 aa3.1□□□□□ -1.91
DNMT1-220ENST00000589351 IGLC3P0DOY3 106 aa3.1□□□□□ -1.91
DNMT1-220ENST00000589351 TMEM170BQ5T4T1 132 aa3.1□□□□□ -1.91
DNMT1-220ENST00000589351 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
DNMT1-220ENST00000589351 ZNF22P17026 224 aaPredicted RBP3.08□□□□□ -1.92
DNMT1-220ENST00000589351 MOBPQ13875 183 aa3.08□□□□□ -1.92
DNMT1-220ENST00000589351 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
DNMT1-220ENST00000589351 GTF2H5Q6ZYL4 71 aa3.08□□□□□ -1.92
DNMT1-220ENST00000589351 TEN1Q86WV5 123 aa3.08□□□□□ -1.92
DNMT1-220ENST00000589351 BAGE3Q86Y29 109 aa3.08□□□□□ -1.92
DNMT1-220ENST00000589351 MIEN1Q9BRT3 115 aa3.08□□□□□ -1.92
DNMT1-220ENST00000589351 KCNQ1DNQ9H478 68 aa3.08□□□□□ -1.92
DNMT1-220ENST00000589351 HBDP02042 147 aa3.07□□□□□ -1.92
DNMT1-220ENST00000589351 SPRR1AP35321 89 aa3.07□□□□□ -1.92
DNMT1-220ENST00000589351 PYY3Q5JQD4 70 aa3.07□□□□□ -1.92
DNMT1-220ENST00000589351 C10orf91Q5T1B1 145 aa3.07□□□□□ -1.92
DNMT1-220ENST00000589351 SEC11CQ9BY50 192 aa3.07□□□□□ -1.92
DNMT1-220ENST00000589351 KRTAP4-1Q9BYQ7 146 aa3.07□□□□□ -1.92
DNMT1-220ENST00000589351 TRBV10-3A0A0K0K1G6 114 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 C11orf86A6NJI1 115 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 K7ERS5 55 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 NCR3O14931 201 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 HIST1H2BKO60814 126 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 HIST1H2BJP06899 126 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 SMIM13P0DJ93 91 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 HINT1P49773 126 aaPredicted RBP3.06□□□□□ -1.92
DNMT1-220ENST00000589351 C9orf153Q5TBE3 101 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 C7orf65Q6ZTY9 151 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 MIR7-3HGQ8N6C7 128 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 Q8NDZ9 215 aa3.06□□□□□ -1.92
DNMT1-220ENST00000589351 LIMD2Q9BT23 127 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms