RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 STX12Q86Y82 276 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 TRGV9Q99603 122 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 PRO1933Q9H354 126 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 TPRKBQ9Y3C4 175 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 S100A3P33764 101 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 CATR1Q13166 79 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 CLPSL2Q6UWE3 100 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 C6orf48Q9UBA6 75 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 LAMTOR3Q9UHA4 124 aa0.04□□□□□ -2.4
RPRD1A-204ENST00000585953 TRACP01848 142 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 NBEAP1P0C6P0 100 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 PRLHP81277 87 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 MRPS36P82909 103 aaKnown RBP0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 PIGYQ3MUY2 71 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 C9orf153Q5TBE3 101 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 TRIQKQ629K1 86 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 CASC2Q6XLA1 102 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 CLEC2BQ92478 149 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 TPT1P8Q9HAU6 139 aa0.03□□□□□ -2.4
RPRD1A-204ENST00000585953 TRAV21A0A0B4J279 112 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 LINC00959A0A1B0GUT2 108 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 EDF1O60869 148 aaKnown RBP0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 SPRR1AP35321 89 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 NEDD8Q15843 81 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 LINC00305Q7Z4B0 112 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 AKAP14Q86UN6 197 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 OR5H6Q8NGV6 325 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 PRELID3AQ96N28 172 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 SCN3BQ9NY72 215 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 COPZ2Q9P299 210 aa0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 FABP2P12104 132 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 SDC2P34741 201 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 SNCAP37840 140 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 CIB3Q96Q77 187 aaPredicted RBP0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 LAMTOR2Q9Y2Q5 125 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 TRAV13-1A0A0B4J241 112 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 F8WEM9 126 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 HBDP02042 147 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 RPS28P62857 69 aaKnown RBP0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 XAF1Q6GPH4 301 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 C5orf17Q8NAS9 161 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 LINC00208Q96KT6 92 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 S100A13Q99584 98 aa0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 SNRPGP15A8MWD9 76 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 H3BMG7 143 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 CDC42EP2O14613 210 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 TPT1P13693 172 aaKnown RBP0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 SMIM11AP58511 58 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 TMEM128Q5BJH2 165 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 CROCCP2Q86T23 111 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 TMEM229BQ8NBD8 167 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 AMELXQ99217 191 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 C3orf85A0A1B0GTC6 90 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 A0A1B0GV72 72 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 A0A1B0GX51 115 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 IFITM5A6NNB3 132 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 FAM107AO95990 144 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 GTF2A1P52655 376 aaPredicted RBP0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 C20orf197Q8N268 126 aa0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 LOC101927531A0A1B0GV80 90 aa0□□□□□ -2.41
RPRD1A-204ENST00000585953 CD3DP04234 171 aa0□□□□□ -2.41
RPRD1A-204ENST00000585953 RPS27P42677 84 aaKnown RBP0□□□□□ -2.41
RPRD1A-204ENST00000585953 AGPAT4-IT1Q9H0P7 198 aa0□□□□□ -2.41
RPRD1A-204ENST00000585953 CMC2Q9NRP2 79 aa0□□□□□ -2.41
RPRD1A-204ENST00000585953 S4R3F8 94 aa0□□□□□ -2.41
RPRD1A-204ENST00000585953 ZNF670-ZNF695F2Z2N8 137 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 UQCRQO14949 82 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 COX4I1P13073 169 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 NMSQ5H8A3 153 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 PSMG3Q9BT73 122 aaPredicted RBP-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 DNAJC15Q9Y5T4 150 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 Q5BKY6 102 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 BRK1Q8WUW1 75 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 DMAC1Q96GE9 116 aa-0.01□□□□□ -2.41
RPRD1A-204ENST00000585953 J3KT08 172 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 IGKCP01834 107 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 ADCYAP1P18509 176 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 ZNF56Q15929 161 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 TMEM91Q6ZNR0 172 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 AP1S3Q96PC3 154 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 HIGD1AQ9Y241 93 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 MT-ND4LP03901 98 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 IGLC2P0DOY2 106 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 AKR1D1P51857 326 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 S100A12P80511 92 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 SMIM15Q7Z3B0 74 aa-0.02□□□□□ -2.41
RPRD1A-204ENST00000585953 TRAV1-2A0A0B4J238 106 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 LINC01546A6NGU7 62 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 PFDN1O60925 122 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 HMGN1P05114 100 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 ETDCA0A1B0GVM5 59 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 HIGD1CA8MV81 97 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 C9JAW5 83 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 DPM2O94777 84 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 LINC00032P0C843 101 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 IL7P13232 177 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 PFDN5Q99471 154 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 PDCD10Q9BUL8 212 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 KCNQ1DNQ9H478 68 aa-0.03□□□□□ -2.41
RPRD1A-204ENST00000585953 BBIP1A8MTZ0 92 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms