RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 H0YGX0 51 aa7.6□□□□□ -1.19
SS18-222ENST00000582792 M0R143 59 aa7.6□□□□□ -1.19
SS18-222ENST00000582792 SLC25A20O43772 301 aa7.6□□□□□ -1.19
SS18-222ENST00000582792 SPRR1BP22528 89 aa7.6□□□□□ -1.19
SS18-222ENST00000582792 LINC00575Q6W349 94 aa7.6□□□□□ -1.19
SS18-222ENST00000582792 GAGE2AQ6NT46 116 aa7.59□□□□□ -1.19
SS18-222ENST00000582792 H7C2G1 150 aa7.58□□□□□ -1.2
SS18-222ENST00000582792 Q1RN00 199 aa7.58□□□□□ -1.2
SS18-222ENST00000582792 hADV29S1A0JD25 119 aa7.57□□□□□ -1.2
SS18-222ENST00000582792 ST20-AS1Q8NBB2 130 aa7.57□□□□□ -1.2
SS18-222ENST00000582792 IGLV5-48A0A075B6I7 105 aa7.56□□□□□ -1.2
SS18-222ENST00000582792 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
SS18-222ENST00000582792 A0A1B0GX51 115 aa7.56□□□□□ -1.2
SS18-222ENST00000582792 SNCGO76070 127 aa7.55□□□□□ -1.2
SS18-222ENST00000582792 RPS29P62273 56 aaKnown RBP7.55□□□□□ -1.2
SS18-222ENST00000582792 K7ERJ3 54 aa7.54□□□□□ -1.2
SS18-222ENST00000582792 XP32Q5T750 250 aa7.54□□□□□ -1.2
SS18-222ENST00000582792 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
SS18-222ENST00000582792 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
SS18-222ENST00000582792 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
SS18-222ENST00000582792 Q8N377 158 aa7.54□□□□□ -1.2
SS18-222ENST00000582792 TRIAP1O43715 76 aa7.53□□□□□ -1.2
SS18-222ENST00000582792 COX6CP09669 75 aa7.53□□□□□ -1.2
SS18-222ENST00000582792 PPDPFLQ8WWR9 84 aa7.53□□□□□ -1.2
SS18-222ENST00000582792 LAMTOR3Q9UHA4 124 aa7.53□□□□□ -1.2
SS18-222ENST00000582792 PSMB2P49721 201 aa7.51□□□□□ -1.21
SS18-222ENST00000582792 MOBPQ13875 183 aa7.51□□□□□ -1.21
SS18-222ENST00000582792 OCIAD2Q56VL3 154 aa7.51□□□□□ -1.21
SS18-222ENST00000582792 Q6ZQY7 126 aa7.51□□□□□ -1.21
SS18-222ENST00000582792 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
SS18-222ENST00000582792 DEFB105AQ8NG35 78 aa7.5□□□□□ -1.21
SS18-222ENST00000582792 GHRHP01286 108 aa7.49□□□□□ -1.21
SS18-222ENST00000582792 SMIM29Q86T20 159 aa7.49□□□□□ -1.21
SS18-222ENST00000582792 FAM218AQ96MZ4 157 aa7.49□□□□□ -1.21
SS18-222ENST00000582792 KRTAP19-2Q3LHN2 52 aa7.48□□□□□ -1.21
SS18-222ENST00000582792 H3BQ85 93 aa7.47□□□□□ -1.21
SS18-222ENST00000582792 MT1HP80294 61 aa7.46□□□□□ -1.22
SS18-222ENST00000582792 C9orf153Q5TBE3 101 aa7.46□□□□□ -1.22
SS18-222ENST00000582792 SCGB1C2P0DMR2 95 aa7.45□□□□□ -1.22
SS18-222ENST00000582792 CLEC2BQ92478 149 aa7.44□□□□□ -1.22
SS18-222ENST00000582792 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
SS18-222ENST00000582792 F8WEM9 126 aa7.43□□□□□ -1.22
SS18-222ENST00000582792 TRACP01848 142 aa7.43□□□□□ -1.22
SS18-222ENST00000582792 BATFQ16520 125 aa7.43□□□□□ -1.22
SS18-222ENST00000582792 LST1O00453 97 aa7.42□□□□□ -1.22
SS18-222ENST00000582792 DNAL4O96015 105 aa7.42□□□□□ -1.22
SS18-222ENST00000582792 CD164Q04900 197 aa7.42□□□□□ -1.22
SS18-222ENST00000582792 SNHG12Q9BXW3 62 aa7.42□□□□□ -1.22
SS18-222ENST00000582792 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
SS18-222ENST00000582792 Q6JHZ5 121 aa7.41□□□□□ -1.22
SS18-222ENST00000582792 PCOTHQ58A44 107 aa7.4□□□□□ -1.22
SS18-222ENST00000582792 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.22
SS18-222ENST00000582792 C9orf118A6NHY6 69 aa7.38□□□□□ -1.23
SS18-222ENST00000582792 TMEM256-PLSCR3K7ERE1 68 aa7.38□□□□□ -1.23
SS18-222ENST00000582792 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
SS18-222ENST00000582792 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
SS18-222ENST00000582792 ATXN8Q156A1 80 aa7.38□□□□□ -1.23
SS18-222ENST00000582792 NDUFV3P56181 108 aaKnown RBP7.37□□□□□ -1.23
SS18-222ENST00000582792 TRBV20-1A0A075B6N2 111 aa7.36□□□□□ -1.23
SS18-222ENST00000582792 H3BUT2 72 aa7.36□□□□□ -1.23
SS18-222ENST00000582792 FABP2P12104 132 aa7.36□□□□□ -1.23
SS18-222ENST00000582792 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
SS18-222ENST00000582792 UBE2V1Q13404 147 aa7.36□□□□□ -1.23
SS18-222ENST00000582792 NAA38Q9BRA0 125 aaKnown RBP7.36□□□□□ -1.23
SS18-222ENST00000582792 TCL1BO95988 128 aa7.35□□□□□ -1.23
SS18-222ENST00000582792 COL5A1-AS1Q5SY13 56 aa7.35□□□□□ -1.23
SS18-222ENST00000582792 Q5XG85 94 aa7.35□□□□□ -1.23
SS18-222ENST00000582792 LIMD2Q9BT23 127 aa7.35□□□□□ -1.23
SS18-222ENST00000582792 C9orf92A6NGG3 77 aa7.33□□□□□ -1.24
SS18-222ENST00000582792 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
SS18-222ENST00000582792 A0A1W2PPM0 123 aa7.32□□□□□ -1.24
SS18-222ENST00000582792 H3BMG7 143 aa7.32□□□□□ -1.24
SS18-222ENST00000582792 BAALC-AS2P0C853 105 aa7.31□□□□□ -1.24
SS18-222ENST00000582792 Q6Q795 121 aa7.31□□□□□ -1.24
SS18-222ENST00000582792 PCP4L1A6NKN8 68 aa7.3□□□□□ -1.24
SS18-222ENST00000582792 HRCT1Q6UXD1 115 aa7.3□□□□□ -1.24
SS18-222ENST00000582792 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
SS18-222ENST00000582792 TRBV7-7A0A0K0K1E9 115 aa7.28□□□□□ -1.24
SS18-222ENST00000582792 M0R2T5 61 aa7.28□□□□□ -1.24
SS18-222ENST00000582792 ANKRD29Q8N6D5 301 aa7.28□□□□□ -1.24
SS18-222ENST00000582792 TEN1Q86WV5 123 aa7.27□□□□□ -1.25
SS18-222ENST00000582792 FLGP20930 4061 aaPredicted RBP7.26□□□□□ -1.25
SS18-222ENST00000582792 RBM3P98179 157 aaKnown RBP7.25□□□□□ -1.25
SS18-222ENST00000582792 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
SS18-222ENST00000582792 C9JAW5 83 aa7.24□□□□□ -1.25
SS18-222ENST00000582792 JMJD7-PLA2G4BH0Y9G9 81 aa7.24□□□□□ -1.25
SS18-222ENST00000582792 H3BT86 120 aa7.24□□□□□ -1.25
SS18-222ENST00000582792 SPCS1Q9Y6A9 102 aa7.24□□□□□ -1.25
SS18-222ENST00000582792 COX6B2Q6YFQ2 88 aa7.23□□□□□ -1.25
SS18-222ENST00000582792 SS18L2Q9UHA2 77 aa7.23□□□□□ -1.25
SS18-222ENST00000582792 A0A1W2PNM2 257 aa7.22□□□□□ -1.25
SS18-222ENST00000582792 DSCR8Q96T75 97 aa7.22□□□□□ -1.25
SS18-222ENST00000582792 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
SS18-222ENST00000582792 C21orf62-AS1Q17RA5 79 aa7.21□□□□□ -1.26
SS18-222ENST00000582792 C1orf195Q5TG92 126 aa7.21□□□□□ -1.26
SS18-222ENST00000582792 PDE6GP18545 87 aa7.2□□□□□ -1.26
SS18-222ENST00000582792 OBSCN-AS1Q96MR7 158 aa7.2□□□□□ -1.26
SS18-222ENST00000582792 K7EP34 96 aa7.19□□□□□ -1.26
SS18-222ENST00000582792 LOC110117498A0A087WWA1 95 aa7.18□□□□□ -1.26
SS18-222ENST00000582792 CCKP06307 115 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms