RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NREPQ16612 68 aa12.7□□□□□ -0.38
SMG8-203ENST00000578922 KRTAP10-2P60368 255 aa12.7□□□□□ -0.38
SMG8-203ENST00000578922 UBE2BP63146 152 aa12.7□□□□□ -0.38
SMG8-203ENST00000578922 Q6ZRX8 168 aa12.7□□□□□ -0.38
SMG8-203ENST00000578922 REG3GQ6UW15 175 aa12.69□□□□□ -0.38
SMG8-203ENST00000578922 SCXQ7RTU7 201 aa12.69□□□□□ -0.38
SMG8-203ENST00000578922 KRTAP11-1Q8IUC1 163 aa12.69□□□□□ -0.38
SMG8-203ENST00000578922 SPRR1AP35321 89 aa12.69□□□□□ -0.38
SMG8-203ENST00000578922 KRTAP4-16G5E9R7 235 aaPredicted RBP12.68□□□□□ -0.38
SMG8-203ENST00000578922 DNAH11Q96DT5 4516 aa12.68□□□□□ -0.38
SMG8-203ENST00000578922 H7BZZ5 65 aa12.67□□□□□ -0.38
SMG8-203ENST00000578922 FAT2Q9NYQ8 4349 aa12.67□□□□□ -0.38
SMG8-203ENST00000578922 FAM236DA0A1B0GTK5 79 aa12.66□□□□□ -0.38
SMG8-203ENST00000578922 FAM236CP0DP71 79 aa12.66□□□□□ -0.38
SMG8-203ENST00000578922 DEFB105AQ8NG35 78 aa12.66□□□□□ -0.38
SMG8-203ENST00000578922 LCE6AA0A183 80 aa12.64□□□□□ -0.39
SMG8-203ENST00000578922 NDUFC1O43677 76 aa12.64□□□□□ -0.39
SMG8-203ENST00000578922 ERC2-IT1O76042 136 aa12.64□□□□□ -0.39
SMG8-203ENST00000578922 Q9BRP9 147 aa12.64□□□□□ -0.39
SMG8-203ENST00000578922 BPY2O14599 106 aa12.63□□□□□ -0.39
SMG8-203ENST00000578922 IGKV4-1P06312 121 aa12.63□□□□□ -0.39
SMG8-203ENST00000578922 DNAH5Q8TE73 4624 aa12.62□□□□□ -0.39
SMG8-203ENST00000578922 PRLHP81277 87 aa12.61□□□□□ -0.39
SMG8-203ENST00000578922 OXTP01178 125 aa12.6□□□□□ -0.39
SMG8-203ENST00000578922 PKD1P98161 4303 aa12.59□□□□□ -0.39
SMG8-203ENST00000578922 SERP1Q9Y6X1 66 aa12.58□□□□□ -0.4
SMG8-203ENST00000578922 SNURFQ9Y675 71 aa12.57□□□□□ -0.4
SMG8-203ENST00000578922 EPM2AB3EWF7 344 aa12.56□□□□□ -0.4
SMG8-203ENST00000578922 C1orf137Q5JT78 98 aa12.56□□□□□ -0.4
SMG8-203ENST00000578922 ST20-AS1Q8NBB2 130 aa12.56□□□□□ -0.4
SMG8-203ENST00000578922 DNAH8Q96JB1 4490 aa12.55□□□□□ -0.4
SMG8-203ENST00000578922 Q8N9L7 120 aa12.55□□□□□ -0.4
SMG8-203ENST00000578922 FAM30AQ9NZY2 134 aa12.55□□□□□ -0.4
SMG8-203ENST00000578922 A0A1W2PNM2 257 aa12.54□□□□□ -0.4
SMG8-203ENST00000578922 Q8NBF4 154 aa12.54□□□□□ -0.4
SMG8-203ENST00000578922 HIGD2AQ9BW72 106 aa12.54□□□□□ -0.4
SMG8-203ENST00000578922 PLAC8Q9NZF1 115 aa12.54□□□□□ -0.4
SMG8-203ENST00000578922 F8WEM9 126 aa12.53□□□□□ -0.4
SMG8-203ENST00000578922 ATP5EP56381 51 aaPredicted RBP12.53□□□□□ -0.4
SMG8-203ENST00000578922 SPRR4Q96PI1 79 aa12.53□□□□□ -0.4
SMG8-203ENST00000578922 OCR1Q9BZK8 76 aa12.53□□□□□ -0.4
SMG8-203ENST00000578922 KMT2CQ8NEZ4 4911 aaKnown RBP12.52□□□□□ -0.4
SMG8-203ENST00000578922 TMEM254Q8TBM7 123 aa12.52□□□□□ -0.4
SMG8-203ENST00000578922 KRTAP10-1P60331 282 aa12.52□□□□□ -0.41
SMG8-203ENST00000578922 C5orf47Q569G3 176 aa12.52□□□□□ -0.41
SMG8-203ENST00000578922 UBE2AP49459 152 aa12.5□□□□□ -0.41
SMG8-203ENST00000578922 SRRM2Q9UQ35 2752 aaKnown RBP12.5□□□□□ -0.41
SMG8-203ENST00000578922 RYR2Q92736 4967 aa12.49□□□□□ -0.41
SMG8-203ENST00000578922 Q5XG85 94 aa12.47□□□□□ -0.41
SMG8-203ENST00000578922 CIRBP-AS1Q8TBR5 109 aa12.46□□□□□ -0.41
SMG8-203ENST00000578922 PSORS1C2Q9UIG4 136 aa12.46□□□□□ -0.42
SMG8-203ENST00000578922 A0A0U1RQV1 116 aa12.45□□□□□ -0.42
SMG8-203ENST00000578922 SMIM29Q86T20 159 aa12.43□□□□□ -0.42
SMG8-203ENST00000578922 PKHD1P08F94 4074 aa12.42□□□□□ -0.42
SMG8-203ENST00000578922 H0Y9J4 135 aa12.42□□□□□ -0.42
SMG8-203ENST00000578922 LINC00336Q6ZUF6 198 aa12.42□□□□□ -0.42
SMG8-203ENST00000578922 Q6ZSA8 131 aa12.4□□□□□ -0.42
SMG8-203ENST00000578922 KRTAP13-1Q8IUC0 172 aa12.4□□□□□ -0.42
SMG8-203ENST00000578922 C4orf26Q17RF5 130 aa12.39□□□□□ -0.43
SMG8-203ENST00000578922 SMIM26A0A096LP01 95 aa12.38□□□□□ -0.43
SMG8-203ENST00000578922 DSCR10P59022 87 aa12.37□□□□□ -0.43
SMG8-203ENST00000578922 IGLV8-61A0A075B6I0 122 aa12.37□□□□□ -0.43
SMG8-203ENST00000578922 IGFL1Q6UW32 110 aa12.33□□□□□ -0.44
SMG8-203ENST00000578922 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
SMG8-203ENST00000578922 LRP1BQ9NZR2 4599 aa12.32□□□□□ -0.44
SMG8-203ENST00000578922 HRCT1Q6UXD1 115 aa12.32□□□□□ -0.44
SMG8-203ENST00000578922 K7EQZ3 153 aa12.3□□□□□ -0.44
SMG8-203ENST00000578922 ZNF861PO60384 105 aa12.29□□□□□ -0.44
SMG8-203ENST00000578922 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.45
SMG8-203ENST00000578922 A0A0G2JQZ4 141 aa12.27□□□□□ -0.45
SMG8-203ENST00000578922 HCG22E2RYF7 251 aa12.27□□□□□ -0.45
SMG8-203ENST00000578922 IGLV7-43P04211 117 aa12.27□□□□□ -0.45
SMG8-203ENST00000578922 SPRR1BP22528 89 aa12.25□□□□□ -0.45
SMG8-203ENST00000578922 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
SMG8-203ENST00000578922 RYR3Q15413 4870 aa12.25□□□□□ -0.45
SMG8-203ENST00000578922 ZCCHC13Q8WW36 166 aaKnown RBP12.22□□□□□ -0.45
SMG8-203ENST00000578922 ANAPC11Q9NYG5 84 aa12.22□□□□□ -0.45
SMG8-203ENST00000578922 A0A087WSZ3 146 aa12.21□□□□□ -0.45
SMG8-203ENST00000578922 ZNF706Q9Y5V0 76 aaPredicted RBP12.18□□□□□ -0.46
SMG8-203ENST00000578922 IGLV9-49A0A0B4J1Y8 123 aa12.17□□□□□ -0.46
SMG8-203ENST00000578922 VPS13BQ7Z7G8 4022 aa12.15□□□□□ -0.46
SMG8-203ENST00000578922 SMR3BP02814 79 aaPredicted RBP12.14□□□□□ -0.47
SMG8-203ENST00000578922 LINC00483Q53H64 154 aa12.14□□□□□ -0.47
SMG8-203ENST00000578922 DEFB116Q30KQ4 102 aa12.12□□□□□ -0.47
SMG8-203ENST00000578922 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
SMG8-203ENST00000578922 NDUFB1O75438 58 aa12.11□□□□□ -0.47
SMG8-203ENST00000578922 KRTAP29-1A8MX34 341 aaPredicted RBP12.1□□□□□ -0.47
SMG8-203ENST00000578922 FAM229BQ4G0N7 80 aa12.09□□□□□ -0.47
SMG8-203ENST00000578922 MP68P56378 58 aa12.09□□□□□ -0.47
SMG8-203ENST00000578922 WFDC13Q8IUB5 93 aa12.09□□□□□ -0.47
SMG8-203ENST00000578922 PRR15Q8IV56 129 aa12.09□□□□□ -0.47
SMG8-203ENST00000578922 hDV103S1A0JD37 113 aa12.08□□□□□ -0.48
SMG8-203ENST00000578922 LINC00472Q9H8W2 130 aa12.08□□□□□ -0.48
SMG8-203ENST00000578922 A8MWP4 228 aa12.07□□□□□ -0.48
SMG8-203ENST00000578922 MOBPQ13875 183 aa12.06□□□□□ -0.48
SMG8-203ENST00000578922 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
SMG8-203ENST00000578922 CYP4F30PQ9H0H9 118 aa12.06□□□□□ -0.48
SMG8-203ENST00000578922 H3BPC8 53 aa12.05□□□□□ -0.48
SMG8-203ENST00000578922 PRO0628Q9UI54 55 aa12.05□□□□□ -0.48
SMG8-203ENST00000578922 CASC2Q6XLA1 102 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms