RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.1□□□□□ -2.231e-32■■■■□ 21.9
PTP4A1-204ENST00000578299 CR1P17927 2039 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 PLECQ15149 4684 aaKnown RBP1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 HUWE1Q7Z6Z7 4374 aaKnown RBP1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 IGLV10-54A0A075B6I4 117 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 H0Y9P7 68 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 H3BUX3 64 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 COX17Q14061 63 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 DEFB136Q30KP8 78 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 BRD3OSQ6XYD6 125 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 RETNLBQ9BQ08 111 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 PRO3102Q9H379 93 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 XAGE1AQ9HD64 81 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 C6orf48Q9UBA6 75 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 ZNF706Q9Y5V0 76 aaPredicted RBP1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 CMYA5Q8N3K9 4069 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 SACSQ9NZJ4 4579 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 KALRNO60229 2985 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 AKAP6Q13023 2319 aa1.1□□□□□ -2.23
PTP4A1-204ENST00000578299 ADGRG4Q8IZF6 3080 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 IGLV5-48A0A075B6I7 105 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 IGLV1-51P01701 117 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 C1orf137Q5JT78 98 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 SPAG11AQ6PDA7 123 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 UNQ6190/PRO20217Q6UXQ8 127 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 KRTAP5-2Q701N4 177 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 SPRR4Q96PI1 79 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 NOP10Q9NPE3 64 aaKnown RBP1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 CACNA1HO95180 2353 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 C2CD3Q4AC94 2353 aa1.09□□□□□ -2.23
PTP4A1-204ENST00000578299 MUC3AQ02505 3323 aa1.09□□□□□ -2.24
PTP4A1-204ENST00000578299 EP300Q09472 2414 aaPredicted RBP1.09□□□□□ -2.24
PTP4A1-204ENST00000578299 APOBP04114 4563 aaKnown RBP1.09□□□□□ -2.24
PTP4A1-204ENST00000578299 DSPP15924 2871 aaKnown RBP1.09□□□□□ -2.24
PTP4A1-204ENST00000578299 ANKHD1Q8IWZ3 2542 aaKnown RBP1.09□□□□□ -2.24
PTP4A1-204ENST00000578299 DNAH7Q8WXX0 4024 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 A0A096LPF7 62 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 GVQW2A0A096LPI5 108 aaPredicted RBP1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 IGKV2-24A0A0C4DH68 120 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 H3BPC8 53 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 CNBPP62633 177 aaKnown RBP1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 DEFB112Q30KQ8 113 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 ASB16-AS1Q495Z4 193 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 PCOTHQ58A44 107 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 CSAG1Q6PB30 78 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 WFDC10BQ8IUB3 73 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 DNAH3Q8TD57 4116 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 TNRC18O15417 2968 aaPredicted RBP1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 CSMD2Q7Z408 3487 aa1.08□□□□□ -2.24
PTP4A1-204ENST00000578299 DMXL1Q9Y485 3027 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 A0A0G2JQZ4 141 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 MMP24-AS1A0A0U1RRL7 71 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 A0A1B0GW54 56 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 A0A1W2PNN7 141 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 HRES1P13985 223 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 RPL37AP61513 92 aaKnown RBP1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 FBXL19-AS1Q494R0 122 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 DEFB105AQ8NG35 78 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 MYCBP2O75592 4640 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 PRKDCP78527 4128 aaKnown RBP1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 COL12A1Q99715 3063 aa1.07□□□□□ -2.24
PTP4A1-204ENST00000578299 LYSTQ99698 3801 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 DNAH6Q9C0G6 4158 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 A0A087WSZ3 146 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 ANGP03950 147 aaKnown RBP1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 CMC4P56277 68 aaPredicted RBP1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 Q6ZRX8 168 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 DEFB124Q8NES8 71 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 ZNF469Q96JG9 3925 aaPredicted RBP1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 TRIOBPQ9H2D6 2365 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 SPTA1P02549 2419 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 HECTD4Q9Y4D8 3996 aa1.06□□□□□ -2.24
PTP4A1-204ENST00000578299 CSMD3Q7Z407 3707 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 ATMQ13315 3056 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 CREBBPQ92793 2442 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 SPTAN1Q13813 2472 aaKnown RBP1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 DCHS2Q6V1P9 2916 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 DEFB131BA0A096LNP1 70 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 A8MWP4 228 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 P0C880 135 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 DEFB130BP0DP73 79 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 DEFB130AP0DP74 79 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 SPRR1AP35321 89 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 LUZP6Q538Z0 58 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 C1orf134Q5TEV5 83 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 SPATA8Q6RVD6 105 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 C4orf3Q8WVX3 66 aa1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 HRNRQ86YZ3 2850 aaPredicted RBP1.05□□□□□ -2.24
PTP4A1-204ENST00000578299 IGLV7-43P04211 117 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 MSMBP08118 114 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 ROMO1P60602 79 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 MIR22HGQ0VDD5 57 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 LELP1Q5T871 98 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 LINC00472Q9H8W2 130 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 PRO0255Q9UI72 69 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 ACACAQ13085 2346 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 PKHD1L1Q86WI1 4243 aa1.04□□□□□ -2.24
PTP4A1-204ENST00000578299 DYNC1H1Q14204 4646 aaKnown RBP1.03□□□□□ -2.24
PTP4A1-204ENST00000578299 IGHV6-1A0A0B4J1U7 121 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms