RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 SERTAD4-AS1Q5TG53 156 aa8.83□□□□□ -1
RNF43-202ENST00000577625 SMIM29Q86T20 159 aa8.83□□□□□ -1
RNF43-202ENST00000577625 ELOF1P60002 83 aaKnown RBP8.82□□□□□ -1
RNF43-202ENST00000577625 C14orf177Q52M58 125 aa8.82□□□□□ -1
RNF43-202ENST00000577625 KTN1-AS1Q86SY8 53 aa8.82□□□□□ -1
RNF43-202ENST00000577625 NKAPP1Q8N9T2 125 aa8.82□□□□□ -1
RNF43-202ENST00000577625 IGLV5-37A0A075B6J1 123 aa8.81□□□□□ -1
RNF43-202ENST00000577625 A8MUN3 132 aa8.8□□□□□ -1
RNF43-202ENST00000577625 C7orf33Q8WU49 177 aa8.79□□□□□ -1
RNF43-202ENST00000577625 KMT2AQ03164 3969 aa8.79□□□□□ -1
RNF43-202ENST00000577625 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.78□□□□□ -1
RNF43-202ENST00000577625 FAM168BA1KXE4 195 aa8.78□□□□□ -1
RNF43-202ENST00000577625 KCNQ1DNQ9H478 68 aa8.78□□□□□ -1
RNF43-202ENST00000577625 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
RNF43-202ENST00000577625 UBE2AP49459 152 aa8.78□□□□□ -1
RNF43-202ENST00000577625 Q5VV11 94 aa8.78□□□□□ -1
RNF43-202ENST00000577625 Q6ZR54 194 aa8.78□□□□□ -1
RNF43-202ENST00000577625 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
RNF43-202ENST00000577625 WWC2-AS2Q96NR7 200 aa8.77□□□□□ -1.01
RNF43-202ENST00000577625 ETDCA0A1B0GVM5 59 aa8.76□□□□□ -1.01
RNF43-202ENST00000577625 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
RNF43-202ENST00000577625 C3orf84H3BNL1 204 aa8.76□□□□□ -1.01
RNF43-202ENST00000577625 A0A096LNI7 61 aa8.75□□□□□ -1.01
RNF43-202ENST00000577625 A0A1B0GW54 56 aa8.75□□□□□ -1.01
RNF43-202ENST00000577625 NDUFB1O75438 58 aa8.75□□□□□ -1.01
RNF43-202ENST00000577625 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
RNF43-202ENST00000577625 A8MU10 97 aa8.74□□□□□ -1.01
RNF43-202ENST00000577625 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
RNF43-202ENST00000577625 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
RNF43-202ENST00000577625 NDUFS5O43920 106 aa8.73□□□□□ -1.01
RNF43-202ENST00000577625 C9orf163Q8N9P6 203 aa8.72□□□□□ -1.01
RNF43-202ENST00000577625 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
RNF43-202ENST00000577625 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.01
RNF43-202ENST00000577625 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.01
RNF43-202ENST00000577625 SPRR1AP35321 89 aa8.71□□□□□ -1.01
RNF43-202ENST00000577625 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.02
RNF43-202ENST00000577625 LY6G6CO95867 125 aa8.71□□□□□ -1.02
RNF43-202ENST00000577625 ATP11AUNQ6ZP68 121 aa8.71□□□□□ -1.02
RNF43-202ENST00000577625 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
RNF43-202ENST00000577625 A0A087WTM6 91 aa8.7□□□□□ -1.02
RNF43-202ENST00000577625 PRR4Q16378 134 aa8.7□□□□□ -1.02
RNF43-202ENST00000577625 LINC00476Q8WZB0 136 aa8.7□□□□□ -1.02
RNF43-202ENST00000577625 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
RNF43-202ENST00000577625 KRTAP4-16G5E9R7 235 aaPredicted RBP8.69□□□□□ -1.02
RNF43-202ENST00000577625 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
RNF43-202ENST00000577625 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
RNF43-202ENST00000577625 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
RNF43-202ENST00000577625 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
RNF43-202ENST00000577625 Q6ZRX8 168 aa8.67□□□□□ -1.02
RNF43-202ENST00000577625 Q8N9P0 234 aaPredicted RBP8.67□□□□□ -1.02
RNF43-202ENST00000577625 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
RNF43-202ENST00000577625 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
RNF43-202ENST00000577625 ST20-AS1Q8NBB2 130 aa8.66□□□□□ -1.02
RNF43-202ENST00000577625 HECTD4Q9Y4D8 3996 aa8.66□□□□□ -1.02
RNF43-202ENST00000577625 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
RNF43-202ENST00000577625 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.03
RNF43-202ENST00000577625 A6NN06 94 aa8.64□□□□□ -1.03
RNF43-202ENST00000577625 REG3GQ6UW15 175 aa8.64□□□□□ -1.03
RNF43-202ENST00000577625 DSCR10P59022 87 aa8.63□□□□□ -1.03
RNF43-202ENST00000577625 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
RNF43-202ENST00000577625 Q75L30 129 aa8.63□□□□□ -1.03
RNF43-202ENST00000577625 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
RNF43-202ENST00000577625 Q9BRP9 147 aa8.63□□□□□ -1.03
RNF43-202ENST00000577625 DNAH17Q9UFH2 4485 aa8.62□□□□□ -1.03
RNF43-202ENST00000577625 LINC00208Q96KT6 92 aa8.62□□□□□ -1.03
RNF43-202ENST00000577625 A0A1W2PNM2 257 aa8.62□□□□□ -1.03
RNF43-202ENST00000577625 PANO1I0J062 215 aa8.62□□□□□ -1.03
RNF43-202ENST00000577625 MP68P56378 58 aa8.62□□□□□ -1.03
RNF43-202ENST00000577625 LCA10Q71F78 164 aa8.62□□□□□ -1.03
RNF43-202ENST00000577625 Q8N377 158 aa8.62□□□□□ -1.03
RNF43-202ENST00000577625 K7EQZ3 153 aa8.61□□□□□ -1.03
RNF43-202ENST00000577625 RTL8CO15255 209 aa8.61□□□□□ -1.03
RNF43-202ENST00000577625 FRAS1Q86XX4 4008 aa8.59□□□□□ -1.03
RNF43-202ENST00000577625 Q8NBF4 154 aa8.59□□□□□ -1.03
RNF43-202ENST00000577625 DEFB105AQ8NG35 78 aa8.59□□□□□ -1.03
RNF43-202ENST00000577625 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
RNF43-202ENST00000577625 A6NED7 52 aa8.58□□□□□ -1.04
RNF43-202ENST00000577625 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
RNF43-202ENST00000577625 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
RNF43-202ENST00000577625 SPRR4Q96PI1 79 aa8.58□□□□□ -1.04
RNF43-202ENST00000577625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
RNF43-202ENST00000577625 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
RNF43-202ENST00000577625 TNP2Q05952 138 aa8.57□□□□□ -1.04
RNF43-202ENST00000577625 C1orf137Q5JT78 98 aa8.57□□□□□ -1.04
RNF43-202ENST00000577625 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
RNF43-202ENST00000577625 CDC42SE1Q9NRR8 79 aa8.57□□□□□ -1.04
RNF43-202ENST00000577625 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
RNF43-202ENST00000577625 H3BPC8 53 aa8.55□□□□□ -1.04
RNF43-202ENST00000577625 PRLHP81277 87 aa8.53□□□□□ -1.04
RNF43-202ENST00000577625 H0Y9J4 135 aa8.52□□□□□ -1.05
RNF43-202ENST00000577625 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
RNF43-202ENST00000577625 KRTAP10-2P60368 255 aa8.49□□□□□ -1.05
RNF43-202ENST00000577625 FAT2Q9NYQ8 4349 aa8.49□□□□□ -1.05
RNF43-202ENST00000577625 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
RNF43-202ENST00000577625 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
RNF43-202ENST00000577625 H0Y9P7 68 aa8.48□□□□□ -1.05
RNF43-202ENST00000577625 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
RNF43-202ENST00000577625 MOBPQ13875 183 aa8.47□□□□□ -1.05
RNF43-202ENST00000577625 WFDC13Q8IUB5 93 aa8.47□□□□□ -1.05
RNF43-202ENST00000577625 SRRM2Q9UQ35 2752 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms