RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NHP2Q9NX24 153 aaKnown RBP3.42□□□□□ -1.86
SMG6-219ENST00000575663 A0A0J9YXY3 114 aa3.41□□□□□ -1.86
SMG6-219ENST00000575663 MYMXA0A1B0GTQ4 84 aa3.41□□□□□ -1.86
SMG6-219ENST00000575663 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
SMG6-219ENST00000575663 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
SMG6-219ENST00000575663 ZNF73O43830 326 aaPredicted RBP3.4□□□□□ -1.87
SMG6-219ENST00000575663 TIMM17BO60830 172 aa3.4□□□□□ -1.87
SMG6-219ENST00000575663 C5orf38Q86SI9 138 aa3.4□□□□□ -1.87
SMG6-219ENST00000575663 LINC00643Q86TS7 51 aa3.4□□□□□ -1.87
SMG6-219ENST00000575663 CDKN2A-AS1Q9UH64 79 aa3.4□□□□□ -1.87
SMG6-219ENST00000575663 SMIM1B2RUZ4 78 aa3.39□□□□□ -1.87
SMG6-219ENST00000575663 LCA10Q71F78 164 aa3.39□□□□□ -1.87
SMG6-219ENST00000575663 FP248Q71RG6 208 aaPredicted RBP3.39□□□□□ -1.87
SMG6-219ENST00000575663 Q8IZM0 81 aa3.39□□□□□ -1.87
SMG6-219ENST00000575663 TP73-AS1Q9UF72 201 aa3.39□□□□□ -1.87
SMG6-219ENST00000575663 IGKV2D-26A0A0A0MRZ7 120 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 ZNF815PA8K554 130 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 TMEM256-PLSCR3K7ERE1 68 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 M0R378 163 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 SMCPP49901 116 aaPredicted RBP3.38□□□□□ -1.87
SMG6-219ENST00000575663 MP68P56378 58 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 COX17Q14061 63 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 FAM229BQ4G0N7 80 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 Q6ZVQ6 151 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 C6orf48Q9UBA6 75 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 NDUFA12Q9UI09 145 aa3.38□□□□□ -1.87
SMG6-219ENST00000575663 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 NDUFC1O43677 76 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 SLC25A20O43772 301 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 BCE1O60756 84 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 PRSS2P07478 247 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 FXYD2P54710 66 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 RNASE13Q5GAN3 156 aaKnown RBP3.37□□□□□ -1.87
SMG6-219ENST00000575663 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 COX7B2Q8TF08 81 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 ZNF625Q96I27 306 aaPredicted RBP3.37□□□□□ -1.87
SMG6-219ENST00000575663 KRTAP4-1Q9BYQ7 146 aa3.37□□□□□ -1.87
SMG6-219ENST00000575663 LOC107984156A0A0G2JMH3 177 aa3.36□□□□□ -1.87
SMG6-219ENST00000575663 LST1O00453 97 aa3.36□□□□□ -1.87
SMG6-219ENST00000575663 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
SMG6-219ENST00000575663 MT1HP80294 61 aa3.36□□□□□ -1.87
SMG6-219ENST00000575663 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
SMG6-219ENST00000575663 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
SMG6-219ENST00000575663 C10orf25Q5T742 122 aa3.36□□□□□ -1.87
SMG6-219ENST00000575663 ARL17AQ8IVW1 177 aa3.36□□□□□ -1.87
SMG6-219ENST00000575663 ANAPC11Q9NYG5 84 aa3.36□□□□□ -1.87
SMG6-219ENST00000575663 A8MUN3 132 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 K7ERJ3 54 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 UBE2AP49459 152 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 CXCL6P80162 114 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 SPAG11AQ6PDA7 123 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 Q75L30 129 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 NKAPP1Q8N9T2 125 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 HIST1H4GQ99525 98 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 C22orf24Q9Y442 160 aa3.35□□□□□ -1.87
SMG6-219ENST00000575663 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
SMG6-219ENST00000575663 LORP23490 312 aaPredicted RBP3.34□□□□□ -1.87
SMG6-219ENST00000575663 TSPEAR-AS2P59090 65 aa3.34□□□□□ -1.87
SMG6-219ENST00000575663 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
SMG6-219ENST00000575663 RBM3P98179 157 aaKnown RBP3.34□□□□□ -1.87
SMG6-219ENST00000575663 KIAA0087Q14695 138 aa3.34□□□□□ -1.87
SMG6-219ENST00000575663 M0R2T5 61 aa3.33□□□□□ -1.88
SMG6-219ENST00000575663 ATXN8Q156A1 80 aa3.33□□□□□ -1.88
SMG6-219ENST00000575663 LCE2CQ5TA81 110 aa3.33□□□□□ -1.88
SMG6-219ENST00000575663 C7orf65Q6ZTY9 151 aa3.33□□□□□ -1.88
SMG6-219ENST00000575663 DAND5Q8N907 189 aa3.33□□□□□ -1.88
SMG6-219ENST00000575663 LITAFQ99732 161 aa3.33□□□□□ -1.88
SMG6-219ENST00000575663 TTTY13Q9BZ97 58 aa3.33□□□□□ -1.88
SMG6-219ENST00000575663 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
SMG6-219ENST00000575663 USH2AO75445 5202 aa3.32□□□□□ -1.88
SMG6-219ENST00000575663 A0A0B4J2C4 111 aa3.32□□□□□ -1.88
SMG6-219ENST00000575663 TRBV10-2A0A0K0K1G8 114 aa3.32□□□□□ -1.88
SMG6-219ENST00000575663 CCKP06307 115 aa3.32□□□□□ -1.88
SMG6-219ENST00000575663 TOMM7Q9P0U1 55 aa3.32□□□□□ -1.88
SMG6-219ENST00000575663 PSPHP1O15172 72 aa3.31□□□□□ -1.88
SMG6-219ENST00000575663 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
SMG6-219ENST00000575663 C2orf82Q6UX34 121 aa3.31□□□□□ -1.88
SMG6-219ENST00000575663 LINC00308Q8TCZ7 52 aa3.31□□□□□ -1.88
SMG6-219ENST00000575663 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
SMG6-219ENST00000575663 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 RPL37AP8A6NKH3 93 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 LINC00158P58513 81 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 S100A7L2Q5SY68 101 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 ADAMTSL4-AS1Q5T5F5 129 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 KRTAP13-1Q8IUC0 172 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 MUSTN1Q8IVN3 82 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 PRO1854Q9UHT4 67 aa3.3□□□□□ -1.88
SMG6-219ENST00000575663 LINC00313P59037 77 aa3.29□□□□□ -1.88
SMG6-219ENST00000575663 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
SMG6-219ENST00000575663 XP32Q5T750 250 aa3.29□□□□□ -1.88
SMG6-219ENST00000575663 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
SMG6-219ENST00000575663 LINC00167Q96N53 147 aa3.29□□□□□ -1.88
SMG6-219ENST00000575663 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
SMG6-219ENST00000575663 SPINK1P00995 79 aa3.28□□□□□ -1.88
SMG6-219ENST00000575663 COX6CP09669 75 aa3.28□□□□□ -1.88
SMG6-219ENST00000575663 CFC1P0CG37 223 aa3.28□□□□□ -1.88
SMG6-219ENST00000575663 PRLHP81277 87 aa3.28□□□□□ -1.88
SMG6-219ENST00000575663 LINC01554Q52M75 96 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms