RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 SPANXA2-OT1Q8N9U9 137 aa9.84□□□□□ -0.83
SMG6-207ENST00000570756 H3BPC8 53 aa9.83□□□□□ -0.84
SMG6-207ENST00000570756 LINC00208Q96KT6 92 aa9.83□□□□□ -0.84
SMG6-207ENST00000570756 IGFL1Q6UW32 110 aa9.81□□□□□ -0.84
SMG6-207ENST00000570756 REG3GQ6UW15 175 aa9.81□□□□□ -0.84
SMG6-207ENST00000570756 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
SMG6-207ENST00000570756 PRB2P02812 416 aaPredicted RBP9.8□□□□□ -0.84
SMG6-207ENST00000570756 Q5VV11 94 aa9.8□□□□□ -0.84
SMG6-207ENST00000570756 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
SMG6-207ENST00000570756 KRTAP7-1Q8IUC3 87 aa9.79□□□□□ -0.84
SMG6-207ENST00000570756 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
SMG6-207ENST00000570756 UBE2AP49459 152 aa9.78□□□□□ -0.84
SMG6-207ENST00000570756 A0A087WSZ3 146 aa9.78□□□□□ -0.84
SMG6-207ENST00000570756 H0Y9P7 68 aa9.77□□□□□ -0.84
SMG6-207ENST00000570756 KRTAP29-1A8MX34 341 aaPredicted RBP9.77□□□□□ -0.85
SMG6-207ENST00000570756 RETNQ9HD89 108 aa9.77□□□□□ -0.85
SMG6-207ENST00000570756 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
SMG6-207ENST00000570756 DEFB131BA0A096LNP1 70 aa9.75□□□□□ -0.85
SMG6-207ENST00000570756 A0A0G2JQZ4 141 aa9.75□□□□□ -0.85
SMG6-207ENST00000570756 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
SMG6-207ENST00000570756 CASC2Q6XLA1 102 aa9.75□□□□□ -0.85
SMG6-207ENST00000570756 Q8N9P0 234 aaPredicted RBP9.75□□□□□ -0.85
SMG6-207ENST00000570756 CHKB-CPT1BH3BT56 60 aa9.74□□□□□ -0.85
SMG6-207ENST00000570756 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
SMG6-207ENST00000570756 RPL37AP61513 92 aaKnown RBP9.72□□□□□ -0.85
SMG6-207ENST00000570756 CD164Q04900 197 aa9.71□□□□□ -0.85
SMG6-207ENST00000570756 PRR15LQ9BU68 103 aa9.71□□□□□ -0.86
SMG6-207ENST00000570756 A8MWP4 228 aa9.68□□□□□ -0.86
SMG6-207ENST00000570756 CASC10Q5T4H9 136 aa9.68□□□□□ -0.86
SMG6-207ENST00000570756 C9orf163Q8N9P6 203 aa9.68□□□□□ -0.86
SMG6-207ENST00000570756 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
SMG6-207ENST00000570756 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
SMG6-207ENST00000570756 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
SMG6-207ENST00000570756 A8MU10 97 aa9.67□□□□□ -0.86
SMG6-207ENST00000570756 PRLHP81277 87 aa9.67□□□□□ -0.86
SMG6-207ENST00000570756 C16orf90A8MZG2 172 aa9.66□□□□□ -0.86
SMG6-207ENST00000570756 Q75L30 129 aa9.66□□□□□ -0.86
SMG6-207ENST00000570756 KTN1-AS1Q86SY8 53 aa9.64□□□□□ -0.87
SMG6-207ENST00000570756 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
SMG6-207ENST00000570756 DNAH3Q8TD57 4116 aa9.64□□□□□ -0.87
SMG6-207ENST00000570756 LOC101927531A0A1B0GV80 90 aa9.63□□□□□ -0.87
SMG6-207ENST00000570756 COA5Q86WW8 74 aa9.63□□□□□ -0.87
SMG6-207ENST00000570756 LINC00472Q9H8W2 130 aa9.63□□□□□ -0.87
SMG6-207ENST00000570756 IGLV7-46A0A075B6I9 117 aa9.62□□□□□ -0.87
SMG6-207ENST00000570756 A6NED7 52 aa9.62□□□□□ -0.87
SMG6-207ENST00000570756 SPTSSBQ8NFR3 76 aa9.61□□□□□ -0.87
SMG6-207ENST00000570756 MEGF8Q7Z7M0 2845 aa9.6□□□□□ -0.87
SMG6-207ENST00000570756 SPRR1BP22528 89 aa9.58□□□□□ -0.88
SMG6-207ENST00000570756 H0Y9J4 135 aa9.58□□□□□ -0.88
SMG6-207ENST00000570756 KRTAP10-11P60412 298 aa9.58□□□□□ -0.88
SMG6-207ENST00000570756 LCA10Q71F78 164 aa9.57□□□□□ -0.88
SMG6-207ENST00000570756 A0A096LNI7 61 aa9.57□□□□□ -0.88
SMG6-207ENST00000570756 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
SMG6-207ENST00000570756 MMP24-AS1A0A0U1RRL7 71 aa9.56□□□□□ -0.88
SMG6-207ENST00000570756 NDUFS5O43920 106 aa9.56□□□□□ -0.88
SMG6-207ENST00000570756 TENM3Q9P273 2699 aa9.56□□□□□ -0.88
SMG6-207ENST00000570756 CDC42SE1Q9NRR8 79 aa9.55□□□□□ -0.88
SMG6-207ENST00000570756 TP53AIP1Q9HCN2 124 aa9.54□□□□□ -0.88
SMG6-207ENST00000570756 COL7A1Q02388 2944 aa9.54□□□□□ -0.88
SMG6-207ENST00000570756 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
SMG6-207ENST00000570756 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
SMG6-207ENST00000570756 A6NN06 94 aa9.51□□□□□ -0.89
SMG6-207ENST00000570756 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
SMG6-207ENST00000570756 PRKDCP78527 4128 aaKnown RBP9.5□□□□□ -0.89
SMG6-207ENST00000570756 DNAH1Q9P2D7 4330 aa9.49□□□□□ -0.89
SMG6-207ENST00000570756 MOBPQ13875 183 aa9.49□□□□□ -0.89
SMG6-207ENST00000570756 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
SMG6-207ENST00000570756 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
SMG6-207ENST00000570756 SPAG11AQ6PDA7 123 aa9.47□□□□□ -0.89
SMG6-207ENST00000570756 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.89
SMG6-207ENST00000570756 ASB16-AS1Q495Z4 193 aa9.46□□□□□ -0.9
SMG6-207ENST00000570756 Q6ZR54 194 aa9.46□□□□□ -0.9
SMG6-207ENST00000570756 TGP01266 2768 aa9.46□□□□□ -0.9
SMG6-207ENST00000570756 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
SMG6-207ENST00000570756 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
SMG6-207ENST00000570756 C7orf65Q6ZTY9 151 aa9.42□□□□□ -0.9
SMG6-207ENST00000570756 C8orf17Q9NRJ1 99 aa9.41□□□□□ -0.9
SMG6-207ENST00000570756 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
SMG6-207ENST00000570756 K7EIL1 84 aa9.41□□□□□ -0.9
SMG6-207ENST00000570756 C14orf177Q52M58 125 aa9.4□□□□□ -0.9
SMG6-207ENST00000570756 Q96NJ1 140 aa9.4□□□□□ -0.91
SMG6-207ENST00000570756 CHTF8P0CG12 524 aa9.39□□□□□ -0.91
SMG6-207ENST00000570756 SRRM2Q9UQ35 2752 aaKnown RBP9.39□□□□□ -0.91
SMG6-207ENST00000570756 HRES1P13985 223 aa9.38□□□□□ -0.91
SMG6-207ENST00000570756 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
SMG6-207ENST00000570756 DNAH9Q9NYC9 4486 aa9.37□□□□□ -0.91
SMG6-207ENST00000570756 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
SMG6-207ENST00000570756 A0A1B0GVX0 72 aa9.35□□□□□ -0.91
SMG6-207ENST00000570756 CDK2AP2O75956 126 aa9.35□□□□□ -0.91
SMG6-207ENST00000570756 SPINK7P58062 85 aa9.35□□□□□ -0.91
SMG6-207ENST00000570756 IGHV6-1A0A0B4J1U7 121 aa9.34□□□□□ -0.91
SMG6-207ENST00000570756 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
SMG6-207ENST00000570756 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
SMG6-207ENST00000570756 MRPL34Q9BQ48 92 aaKnown RBP9.33□□□□□ -0.92
SMG6-207ENST00000570756 KRTAP13-1Q8IUC0 172 aa9.33□□□□□ -0.92
SMG6-207ENST00000570756 LINC00483Q53H64 154 aa9.26□□□□□ -0.93
SMG6-207ENST00000570756 DNAH10Q8IVF4 4471 aa9.26□□□□□ -0.93
SMG6-207ENST00000570756 UBE2DNLQ8IWF7 75 aa9.25□□□□□ -0.93
SMG6-207ENST00000570756 ZNF706Q9Y5V0 76 aaPredicted RBP9.24□□□□□ -0.93
SMG6-207ENST00000570756 CSMD3Q7Z407 3707 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms