RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 HIST1H4GQ99525 98 aa6.65□□□□□ -1.34
SNX29-207ENST00000568949 VAMP3Q15836 100 aa6.64□□□□□ -1.35
SNX29-207ENST00000568949 SPATA45Q537H7 98 aa6.64□□□□□ -1.35
SNX29-207ENST00000568949 NHP2Q9NX24 153 aaKnown RBP6.64□□□□□ -1.35
SNX29-207ENST00000568949 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
SNX29-207ENST00000568949 A0A1B0GWB2 263 aa6.63□□□□□ -1.35
SNX29-207ENST00000568949 COX7BP24311 80 aa6.63□□□□□ -1.35
SNX29-207ENST00000568949 PAM16Q9Y3D7 125 aa6.63□□□□□ -1.35
SNX29-207ENST00000568949 ELOF1P60002 83 aaKnown RBP6.62□□□□□ -1.35
SNX29-207ENST00000568949 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
SNX29-207ENST00000568949 C6orf99Q4VX62 202 aa6.62□□□□□ -1.35
SNX29-207ENST00000568949 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
SNX29-207ENST00000568949 HIGD1BQ9P298 99 aa6.62□□□□□ -1.35
SNX29-207ENST00000568949 HRCT1Q6UXD1 115 aa6.61□□□□□ -1.35
SNX29-207ENST00000568949 SPRR1BP22528 89 aa6.6□□□□□ -1.35
SNX29-207ENST00000568949 TAL2Q16559 108 aa6.6□□□□□ -1.35
SNX29-207ENST00000568949 C14orf144Q96I85 54 aa6.6□□□□□ -1.35
SNX29-207ENST00000568949 USH2AO75445 5202 aa6.59□□□□□ -1.35
SNX29-207ENST00000568949 SNCGO76070 127 aa6.59□□□□□ -1.35
SNX29-207ENST00000568949 CFC1P0CG37 223 aa6.58□□□□□ -1.36
SNX29-207ENST00000568949 CD164Q04900 197 aa6.58□□□□□ -1.36
SNX29-207ENST00000568949 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
SNX29-207ENST00000568949 Q5XG85 94 aa6.57□□□□□ -1.36
SNX29-207ENST00000568949 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
SNX29-207ENST00000568949 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
SNX29-207ENST00000568949 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
SNX29-207ENST00000568949 TEX49A0A1B0GTD5 131 aa6.55□□□□□ -1.36
SNX29-207ENST00000568949 PYY3Q5JQD4 70 aa6.55□□□□□ -1.36
SNX29-207ENST00000568949 C1orf195Q5TG92 126 aa6.54□□□□□ -1.36
SNX29-207ENST00000568949 A0A0B4J2C4 111 aa6.53□□□□□ -1.36
SNX29-207ENST00000568949 CEND1Q8N111 149 aa6.53□□□□□ -1.36
SNX29-207ENST00000568949 FCGBPQ9Y6R7 5405 aaPredicted RBP6.53□□□□□ -1.36
SNX29-207ENST00000568949 H7C2G1 150 aa6.52□□□□□ -1.37
SNX29-207ENST00000568949 KRTAP9-8Q9BYQ0 159 aa6.52□□□□□ -1.37
SNX29-207ENST00000568949 PRO1933Q9H354 126 aa6.52□□□□□ -1.37
SNX29-207ENST00000568949 UQCR10Q9UDW1 63 aa6.52□□□□□ -1.37
SNX29-207ENST00000568949 H0YGX0 51 aa6.51□□□□□ -1.37
SNX29-207ENST00000568949 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
SNX29-207ENST00000568949 IGLV5-48A0A075B6I7 105 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 hADV29S1A0JD25 119 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 HSD52Q0P140 79 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 Q6Q795 121 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 DEFB105AQ8NG35 78 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 PPDPFLQ8WWR9 84 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 PRO1854Q9UHT4 67 aa6.5□□□□□ -1.37
SNX29-207ENST00000568949 Q1RN00 199 aa6.49□□□□□ -1.37
SNX29-207ENST00000568949 OCIAD2Q56VL3 154 aa6.49□□□□□ -1.37
SNX29-207ENST00000568949 C12orf57Q99622 126 aa6.49□□□□□ -1.37
SNX29-207ENST00000568949 F8WEM9 126 aa6.48□□□□□ -1.37
SNX29-207ENST00000568949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.48□□□□□ -1.37
SNX29-207ENST00000568949 SMIM29Q86T20 159 aa6.48□□□□□ -1.37
SNX29-207ENST00000568949 PCP4P48539 62 aa6.47□□□□□ -1.37
SNX29-207ENST00000568949 A0A1B0GX51 115 aa6.46□□□□□ -1.38
SNX29-207ENST00000568949 COX6CP09669 75 aa6.46□□□□□ -1.38
SNX29-207ENST00000568949 SMIM6P0DI80 62 aa6.45□□□□□ -1.38
SNX29-207ENST00000568949 Q6ZQY7 126 aa6.45□□□□□ -1.38
SNX29-207ENST00000568949 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
SNX29-207ENST00000568949 H3BQ85 93 aa6.44□□□□□ -1.38
SNX29-207ENST00000568949 Q6JHZ5 121 aa6.43□□□□□ -1.38
SNX29-207ENST00000568949 ATP11AUNQ6ZP68 121 aa6.43□□□□□ -1.38
SNX29-207ENST00000568949 SNHG12Q9BXW3 62 aa6.43□□□□□ -1.38
SNX29-207ENST00000568949 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
SNX29-207ENST00000568949 TCL1BO95988 128 aa6.42□□□□□ -1.38
SNX29-207ENST00000568949 FXYD2P54710 66 aa6.42□□□□□ -1.38
SNX29-207ENST00000568949 M0R143 59 aa6.41□□□□□ -1.38
SNX29-207ENST00000568949 PSMB2P49721 201 aa6.41□□□□□ -1.38
SNX29-207ENST00000568949 A0A0G2JQZ4 141 aa6.4□□□□□ -1.38
SNX29-207ENST00000568949 DNAL4O96015 105 aa6.4□□□□□ -1.38
SNX29-207ENST00000568949 Q75L30 129 aa6.4□□□□□ -1.38
SNX29-207ENST00000568949 TSTD3H0UI37 97 aa6.39□□□□□ -1.39
SNX29-207ENST00000568949 MT2AP02795 61 aa6.37□□□□□ -1.39
SNX29-207ENST00000568949 MACF1Q9UPN3 7388 aaKnown RBP6.37□□□□□ -1.39
SNX29-207ENST00000568949 TRIAP1O43715 76 aa6.36□□□□□ -1.39
SNX29-207ENST00000568949 CLEC2BQ92478 149 aa6.36□□□□□ -1.39
SNX29-207ENST00000568949 OBSCN-AS1Q96MR7 158 aa6.35□□□□□ -1.39
SNX29-207ENST00000568949 TMEM256-PLSCR3K7ERE1 68 aa6.34□□□□□ -1.39
SNX29-207ENST00000568949 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
SNX29-207ENST00000568949 ORMDL1Q9P0S3 153 aa6.34□□□□□ -1.39
SNX29-207ENST00000568949 FABP2P12104 132 aa6.33□□□□□ -1.4
SNX29-207ENST00000568949 TRBV20-1A0A075B6N2 111 aa6.32□□□□□ -1.4
SNX29-207ENST00000568949 K7ERJ3 54 aa6.32□□□□□ -1.4
SNX29-207ENST00000568949 NDUFV3P56181 108 aaKnown RBP6.32□□□□□ -1.4
SNX29-207ENST00000568949 LYRM7Q5U5X0 104 aa6.32□□□□□ -1.4
SNX29-207ENST00000568949 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
SNX29-207ENST00000568949 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
SNX29-207ENST00000568949 TRACP01848 142 aa6.31□□□□□ -1.4
SNX29-207ENST00000568949 MT1FP04733 61 aa6.31□□□□□ -1.4
SNX29-207ENST00000568949 LINC00846Q9NV44 126 aa6.31□□□□□ -1.4
SNX29-207ENST00000568949 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
SNX29-207ENST00000568949 H3BMG7 143 aa6.3□□□□□ -1.4
SNX29-207ENST00000568949 IGFL1Q6UW32 110 aa6.3□□□□□ -1.4
SNX29-207ENST00000568949 TEN1Q86WV5 123 aa6.29□□□□□ -1.4
SNX29-207ENST00000568949 TRBV7-7A0A0K0K1E9 115 aa6.28□□□□□ -1.4
SNX29-207ENST00000568949 LOC105371267A0A1B0GV96 52 aa6.28□□□□□ -1.4
SNX29-207ENST00000568949 LST1O00453 97 aa6.27□□□□□ -1.41
SNX29-207ENST00000568949 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
SNX29-207ENST00000568949 UBE2V1Q13404 147 aa6.27□□□□□ -1.41
SNX29-207ENST00000568949 Q96NJ1 140 aa6.27□□□□□ -1.41
SNX29-207ENST00000568949 C20orf166-AS1Q96NR2 134 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms