RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TRAV13-2A0A0B4J235 113 aa7.83□□□□□ -1.16
USB1-214ENST00000568848 SLC25A34Q6PIV7 304 aa7.83□□□□□ -1.16
USB1-214ENST00000568848 TEX49A0A1B0GTD5 131 aa7.81□□□□□ -1.16
USB1-214ENST00000568848 A4D1N5 150 aa7.81□□□□□ -1.16
USB1-214ENST00000568848 C1orf195Q5TG92 126 aa7.81□□□□□ -1.16
USB1-214ENST00000568848 Q6Q795 121 aa7.81□□□□□ -1.16
USB1-214ENST00000568848 SMIM29Q86T20 159 aa7.8□□□□□ -1.16
USB1-214ENST00000568848 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
USB1-214ENST00000568848 C12orf57Q99622 126 aa7.77□□□□□ -1.17
USB1-214ENST00000568848 COX8AP10176 69 aa7.76□□□□□ -1.17
USB1-214ENST00000568848 HIST1H4GQ99525 98 aa7.76□□□□□ -1.17
USB1-214ENST00000568848 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
USB1-214ENST00000568848 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
USB1-214ENST00000568848 VAMP3Q15836 100 aa7.74□□□□□ -1.17
USB1-214ENST00000568848 LINC00575Q6W349 94 aa7.74□□□□□ -1.17
USB1-214ENST00000568848 C14orf144Q96I85 54 aa7.74□□□□□ -1.17
USB1-214ENST00000568848 NHP2Q9NX24 153 aaKnown RBP7.74□□□□□ -1.17
USB1-214ENST00000568848 KRTAP9-8Q9BYQ0 159 aa7.73□□□□□ -1.17
USB1-214ENST00000568848 CD164Q04900 197 aa7.72□□□□□ -1.17
USB1-214ENST00000568848 PAM16Q9Y3D7 125 aa7.72□□□□□ -1.17
USB1-214ENST00000568848 hADV29S1A0JD25 119 aa7.71□□□□□ -1.18
USB1-214ENST00000568848 DLEU1O43261 78 aa7.71□□□□□ -1.18
USB1-214ENST00000568848 SPATA45Q537H7 98 aa7.71□□□□□ -1.18
USB1-214ENST00000568848 SYNE2Q8WXH0 6885 aaKnown RBP7.7□□□□□ -1.18
USB1-214ENST00000568848 Q6ZQY7 126 aa7.7□□□□□ -1.18
USB1-214ENST00000568848 CFC1P0CG37 223 aa7.68□□□□□ -1.18
USB1-214ENST00000568848 C2orf91Q6ZV80 131 aa7.67□□□□□ -1.18
USB1-214ENST00000568848 VAMP8Q9BV40 100 aa7.67□□□□□ -1.18
USB1-214ENST00000568848 Q5XG85 94 aa7.66□□□□□ -1.18
USB1-214ENST00000568848 HIGD1BQ9P298 99 aa7.66□□□□□ -1.18
USB1-214ENST00000568848 F8WEM9 126 aa7.65□□□□□ -1.18
USB1-214ENST00000568848 BVES-AS1Q5T3Y7 98 aa7.65□□□□□ -1.18
USB1-214ENST00000568848 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
USB1-214ENST00000568848 MACF1Q9UPN3 7388 aaKnown RBP7.65□□□□□ -1.19
USB1-214ENST00000568848 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.64□□□□□ -1.19
USB1-214ENST00000568848 RAB37Q96AX2 223 aa7.64□□□□□ -1.19
USB1-214ENST00000568848 OBSCN-AS1Q96MR7 158 aa7.63□□□□□ -1.19
USB1-214ENST00000568848 OCIAD2Q56VL3 154 aa7.62□□□□□ -1.19
USB1-214ENST00000568848 IGFL1Q6UW32 110 aa7.62□□□□□ -1.19
USB1-214ENST00000568848 LCE2BO14633 110 aa7.61□□□□□ -1.19
USB1-214ENST00000568848 CEND1Q8N111 149 aa7.61□□□□□ -1.19
USB1-214ENST00000568848 A0A0B4J2C4 111 aa7.6□□□□□ -1.19
USB1-214ENST00000568848 MT2AP02795 61 aa7.6□□□□□ -1.19
USB1-214ENST00000568848 Q6JHZ5 121 aa7.6□□□□□ -1.19
USB1-214ENST00000568848 SNHG12Q9BXW3 62 aa7.6□□□□□ -1.19
USB1-214ENST00000568848 TCL1BO95988 128 aa7.59□□□□□ -1.19
USB1-214ENST00000568848 FAM218AQ96MZ4 157 aa7.59□□□□□ -1.19
USB1-214ENST00000568848 H3BUT2 72 aa7.58□□□□□ -1.2
USB1-214ENST00000568848 FXYD2P54710 66 aa7.58□□□□□ -1.2
USB1-214ENST00000568848 PYY3Q5JQD4 70 aa7.58□□□□□ -1.2
USB1-214ENST00000568848 CLEC2BQ92478 149 aa7.58□□□□□ -1.2
USB1-214ENST00000568848 TRBV7-7A0A0K0K1E9 115 aa7.57□□□□□ -1.2
USB1-214ENST00000568848 MT1FP04733 61 aa7.57□□□□□ -1.2
USB1-214ENST00000568848 H0YGX0 51 aa7.56□□□□□ -1.2
USB1-214ENST00000568848 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
USB1-214ENST00000568848 PPDPFLQ8WWR9 84 aa7.56□□□□□ -1.2
USB1-214ENST00000568848 PRO1854Q9UHT4 67 aa7.56□□□□□ -1.2
USB1-214ENST00000568848 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
USB1-214ENST00000568848 Q75L30 129 aa7.54□□□□□ -1.2
USB1-214ENST00000568848 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
USB1-214ENST00000568848 A6NJY4 79 aa7.53□□□□□ -1.2
USB1-214ENST00000568848 SNCGO76070 127 aa7.53□□□□□ -1.2
USB1-214ENST00000568848 NDUFV3P56181 108 aaKnown RBP7.52□□□□□ -1.21
USB1-214ENST00000568848 TRIAP1O43715 76 aa7.51□□□□□ -1.21
USB1-214ENST00000568848 Q96NJ1 140 aa7.51□□□□□ -1.21
USB1-214ENST00000568848 K7ERJ3 54 aa7.49□□□□□ -1.21
USB1-214ENST00000568848 HSD52Q0P140 79 aa7.49□□□□□ -1.21
USB1-214ENST00000568848 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
USB1-214ENST00000568848 FABP2P12104 132 aa7.48□□□□□ -1.21
USB1-214ENST00000568848 A0A1B0GX51 115 aa7.47□□□□□ -1.21
USB1-214ENST00000568848 H3BMG7 143 aa7.46□□□□□ -1.22
USB1-214ENST00000568848 LST1O00453 97 aa7.46□□□□□ -1.22
USB1-214ENST00000568848 PSMB2P49721 201 aa7.45□□□□□ -1.22
USB1-214ENST00000568848 TEN1Q86WV5 123 aa7.45□□□□□ -1.22
USB1-214ENST00000568848 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
USB1-214ENST00000568848 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
USB1-214ENST00000568848 UQCR10Q9UDW1 63 aa7.44□□□□□ -1.22
USB1-214ENST00000568848 A0A087WSZ3 146 aa7.43□□□□□ -1.22
USB1-214ENST00000568848 A0A1B0GV72 72 aa7.42□□□□□ -1.22
USB1-214ENST00000568848 A0A1W2PNM2 257 aa7.41□□□□□ -1.22
USB1-214ENST00000568848 GHRHP01286 108 aa7.41□□□□□ -1.22
USB1-214ENST00000568848 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
USB1-214ENST00000568848 SS18L2Q9UHA2 77 aa7.41□□□□□ -1.22
USB1-214ENST00000568848 A8MUU9 505 aa7.4□□□□□ -1.22
USB1-214ENST00000568848 DNAL4O96015 105 aa7.4□□□□□ -1.22
USB1-214ENST00000568848 DSCR10P59022 87 aa7.4□□□□□ -1.22
USB1-214ENST00000568848 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.22
USB1-214ENST00000568848 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
USB1-214ENST00000568848 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
USB1-214ENST00000568848 COX6CP09669 75 aa7.39□□□□□ -1.23
USB1-214ENST00000568848 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
USB1-214ENST00000568848 ANKRD29Q8N6D5 301 aa7.37□□□□□ -1.23
USB1-214ENST00000568848 TMEM256-PLSCR3K7ERE1 68 aa7.35□□□□□ -1.23
USB1-214ENST00000568848 SCGB1C2P0DMR2 95 aa7.34□□□□□ -1.23
USB1-214ENST00000568848 H3BQ85 93 aa7.33□□□□□ -1.24
USB1-214ENST00000568848 HRES1P13985 223 aa7.33□□□□□ -1.24
USB1-214ENST00000568848 TRBV7-4A0A0J9YYF1 115 aa7.31□□□□□ -1.24
USB1-214ENST00000568848 TRACP01848 142 aa7.31□□□□□ -1.24
USB1-214ENST00000568848 SIGMAR1Q99720 223 aa7.31□□□□□ -1.24
USB1-214ENST00000568848 CCKP06307 115 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms