RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 Q5VV11 94 aa4.88□□□□□ -1.63
TCF4-216ENST00000562680 COA5Q86WW8 74 aa4.88□□□□□ -1.63
TCF4-216ENST00000562680 RPL37AP61513 92 aaKnown RBP4.88□□□□□ -1.63
TCF4-216ENST00000562680 FAM168BA1KXE4 195 aa4.87□□□□□ -1.63
TCF4-216ENST00000562680 CASC10Q5T4H9 136 aa4.87□□□□□ -1.63
TCF4-216ENST00000562680 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
TCF4-216ENST00000562680 HRNRQ86YZ3 2850 aaPredicted RBP4.87□□□□□ -1.63
TCF4-216ENST00000562680 DEFB116Q30KQ4 102 aa4.86□□□□□ -1.63
TCF4-216ENST00000562680 ASB16-AS1Q495Z4 193 aa4.86□□□□□ -1.63
TCF4-216ENST00000562680 ZNF861PO60384 105 aa4.86□□□□□ -1.63
TCF4-216ENST00000562680 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
TCF4-216ENST00000562680 ZZEF1O43149 2961 aa4.85□□□□□ -1.63
TCF4-216ENST00000562680 MOBPQ13875 183 aa4.85□□□□□ -1.63
TCF4-216ENST00000562680 DNAH14Q0VDD8 3507 aa4.85□□□□□ -1.63
TCF4-216ENST00000562680 OBSCN-AS1Q96MR7 158 aa4.85□□□□□ -1.63
TCF4-216ENST00000562680 SSBP3-AS1Q7Z2R9 100 aa4.84□□□□□ -1.63
TCF4-216ENST00000562680 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
TCF4-216ENST00000562680 A6NN06 94 aa4.84□□□□□ -1.64
TCF4-216ENST00000562680 ST20-AS1Q8NBB2 130 aa4.83□□□□□ -1.64
TCF4-216ENST00000562680 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
TCF4-216ENST00000562680 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
TCF4-216ENST00000562680 CELSR3Q9NYQ7 3312 aa4.83□□□□□ -1.64
TCF4-216ENST00000562680 LRBAP50851 2863 aa4.83□□□□□ -1.64
TCF4-216ENST00000562680 A0A1W2PNN7 141 aa4.83□□□□□ -1.64
TCF4-216ENST00000562680 UQCR11O14957 56 aa4.81□□□□□ -1.64
TCF4-216ENST00000562680 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
TCF4-216ENST00000562680 ZANQ9Y493 2812 aa4.81□□□□□ -1.64
TCF4-216ENST00000562680 IGLV7-43P04211 117 aa4.81□□□□□ -1.64
TCF4-216ENST00000562680 NIPBLQ6KC79 2804 aaeCLIP4.81□□□□□ -1.64
TCF4-216ENST00000562680 TNP2Q05952 138 aa4.81□□□□□ -1.64
TCF4-216ENST00000562680 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
TCF4-216ENST00000562680 TYMSOSQ8TAI1 123 aa4.81□□□□□ -1.64
TCF4-216ENST00000562680 Q8N377 158 aa4.8□□□□□ -1.64
TCF4-216ENST00000562680 TACC2O95359 2948 aa4.79□□□□□ -1.64
TCF4-216ENST00000562680 OCR1Q9BZK8 76 aa4.79□□□□□ -1.64
TCF4-216ENST00000562680 PSORS1C2Q9UIG4 136 aa4.79□□□□□ -1.64
TCF4-216ENST00000562680 SPACA4Q8TDM5 124 aa4.79□□□□□ -1.64
TCF4-216ENST00000562680 TP53AIP1Q9HCN2 124 aa4.79□□□□□ -1.64
TCF4-216ENST00000562680 USP34Q70CQ2 3546 aa4.79□□□□□ -1.64
TCF4-216ENST00000562680 ACYP2P14621 99 aa4.78□□□□□ -1.64
TCF4-216ENST00000562680 SPRR4Q96PI1 79 aa4.78□□□□□ -1.64
TCF4-216ENST00000562680 PLAC8Q9NZF1 115 aa4.78□□□□□ -1.64
TCF4-216ENST00000562680 SPRR1AP35321 89 aa4.78□□□□□ -1.64
TCF4-216ENST00000562680 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
TCF4-216ENST00000562680 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
TCF4-216ENST00000562680 KRTAP1-5Q9BYS1 174 aa4.77□□□□□ -1.65
TCF4-216ENST00000562680 LCE6AA0A183 80 aa4.77□□□□□ -1.65
TCF4-216ENST00000562680 SPINK1P00995 79 aa4.77□□□□□ -1.65
TCF4-216ENST00000562680 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
TCF4-216ENST00000562680 IGFL1Q6UW32 110 aa4.76□□□□□ -1.65
TCF4-216ENST00000562680 Q6ZR54 194 aa4.76□□□□□ -1.65
TCF4-216ENST00000562680 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
TCF4-216ENST00000562680 LOC400499M0QZD8 3231 aa4.76□□□□□ -1.65
TCF4-216ENST00000562680 NBEAL1Q6ZS30 2694 aa4.75□□□□□ -1.65
TCF4-216ENST00000562680 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
TCF4-216ENST00000562680 A8MWP4 228 aa4.74□□□□□ -1.65
TCF4-216ENST00000562680 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
TCF4-216ENST00000562680 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.74□□□□□ -1.65
TCF4-216ENST00000562680 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
TCF4-216ENST00000562680 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
TCF4-216ENST00000562680 LINC00304Q8N9R0 145 aa4.72□□□□□ -1.65
TCF4-216ENST00000562680 TENM4Q6N022 2769 aa4.72□□□□□ -1.65
TCF4-216ENST00000562680 SPRR1BP22528 89 aa4.72□□□□□ -1.65
TCF4-216ENST00000562680 CELSR2Q9HCU4 2923 aa4.71□□□□□ -1.65
TCF4-216ENST00000562680 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
TCF4-216ENST00000562680 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
TCF4-216ENST00000562680 Q8NDZ9 215 aa4.69□□□□□ -1.66
TCF4-216ENST00000562680 ASH1LQ9NR48 2969 aaKnown RBP4.69□□□□□ -1.66
TCF4-216ENST00000562680 FBN2P35556 2912 aa4.68□□□□□ -1.66
TCF4-216ENST00000562680 PDZD2O15018 2839 aa4.68□□□□□ -1.66
TCF4-216ENST00000562680 A0A087X002 238 aa4.68□□□□□ -1.66
TCF4-216ENST00000562680 SPEGQ15772 3267 aa4.68□□□□□ -1.66
TCF4-216ENST00000562680 IGLV8-61A0A075B6I0 122 aa4.67□□□□□ -1.66
TCF4-216ENST00000562680 K7EQZ3 153 aa4.67□□□□□ -1.66
TCF4-216ENST00000562680 MRPL34Q9BQ48 92 aaKnown RBP4.67□□□□□ -1.66
TCF4-216ENST00000562680 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
TCF4-216ENST00000562680 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
TCF4-216ENST00000562680 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
TCF4-216ENST00000562680 SPINK7P58062 85 aa4.67□□□□□ -1.66
TCF4-216ENST00000562680 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
TCF4-216ENST00000562680 C8orf17Q9NRJ1 99 aa4.66□□□□□ -1.66
TCF4-216ENST00000562680 CRYBG3Q68DQ2 2970 aa4.64□□□□□ -1.67
TCF4-216ENST00000562680 NF1P21359 2839 aa4.64□□□□□ -1.67
TCF4-216ENST00000562680 MXRA5Q9NR99 2828 aa4.64□□□□□ -1.67
TCF4-216ENST00000562680 IGLV7-46A0A075B6I9 117 aa4.64□□□□□ -1.67
TCF4-216ENST00000562680 J3QL48 77 aa4.64□□□□□ -1.67
TCF4-216ENST00000562680 DCHS2Q6V1P9 2916 aa4.63□□□□□ -1.67
TCF4-216ENST00000562680 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
TCF4-216ENST00000562680 MYO15AQ9UKN7 3530 aa4.62□□□□□ -1.67
TCF4-216ENST00000562680 KRTAP10-1P60331 282 aa4.62□□□□□ -1.67
TCF4-216ENST00000562680 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
TCF4-216ENST00000562680 Q96NJ1 140 aa4.61□□□□□ -1.67
TCF4-216ENST00000562680 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
TCF4-216ENST00000562680 ROMO1P60602 79 aa4.61□□□□□ -1.67
TCF4-216ENST00000562680 A8MU10 97 aa4.6□□□□□ -1.67
TCF4-216ENST00000562680 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
TCF4-216ENST00000562680 MUC3AQ02505 3323 aa4.6□□□□□ -1.67
TCF4-216ENST00000562680 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
TCF4-216ENST00000562680 DCHS1Q96JQ0 3298 aa4.59□□□□□ -1.68
TCF4-216ENST00000562680 A0A0G2JQZ4 141 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms