RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 CRYGAP11844 174 aa6.28□□□□□ -1.4
TPM1-227ENST00000560970 TYMSOSQ8TAI1 123 aa6.28□□□□□ -1.4
TPM1-227ENST00000560970 CLEC2BQ92478 149 aa6.28□□□□□ -1.4
TPM1-227ENST00000560970 HIGD2AQ9BW72 106 aa6.28□□□□□ -1.4
TPM1-227ENST00000560970 TRAV23DV6A0A075B6W5 121 aa6.27□□□□□ -1.41
TPM1-227ENST00000560970 ETDCA0A1B0GVM5 59 aa6.27□□□□□ -1.41
TPM1-227ENST00000560970 B5MCH6 92 aa6.27□□□□□ -1.41
TPM1-227ENST00000560970 H3BT86 120 aa6.27□□□□□ -1.41
TPM1-227ENST00000560970 SLC25A20O43772 301 aa6.27□□□□□ -1.41
TPM1-227ENST00000560970 KRTAP13-2Q52LG2 175 aa6.27□□□□□ -1.41
TPM1-227ENST00000560970 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
TPM1-227ENST00000560970 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
TPM1-227ENST00000560970 A0A1B0GX51 115 aa6.25□□□□□ -1.41
TPM1-227ENST00000560970 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
TPM1-227ENST00000560970 MTURNQ8N3F0 131 aa6.25□□□□□ -1.41
TPM1-227ENST00000560970 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
TPM1-227ENST00000560970 Q9BRP9 147 aa6.25□□□□□ -1.41
TPM1-227ENST00000560970 MUC17Q685J3 4493 aa6.25□□□□□ -1.41
TPM1-227ENST00000560970 K7ERU9 68 aa6.24□□□□□ -1.41
TPM1-227ENST00000560970 ERC2-IT1O76042 136 aa6.24□□□□□ -1.41
TPM1-227ENST00000560970 OCIAD2Q56VL3 154 aa6.24□□□□□ -1.41
TPM1-227ENST00000560970 TEN1Q86WV5 123 aa6.24□□□□□ -1.41
TPM1-227ENST00000560970 ANKRD29Q8N6D5 301 aa6.24□□□□□ -1.41
TPM1-227ENST00000560970 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
TPM1-227ENST00000560970 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 ETDBQ3ZM63 59 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 C6orf99Q4VX62 202 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 Q6ZRX8 168 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 LINC00304Q8N9R0 145 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
TPM1-227ENST00000560970 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
TPM1-227ENST00000560970 SNCGO76070 127 aa6.22□□□□□ -1.41
TPM1-227ENST00000560970 DNAL4O96015 105 aa6.22□□□□□ -1.41
TPM1-227ENST00000560970 J3QR89 54 aa6.21□□□□□ -1.42
TPM1-227ENST00000560970 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
TPM1-227ENST00000560970 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
TPM1-227ENST00000560970 LINC00575Q6W349 94 aa6.19□□□□□ -1.42
TPM1-227ENST00000560970 ZNF706Q9Y5V0 76 aaPredicted RBP6.19□□□□□ -1.42
TPM1-227ENST00000560970 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
TPM1-227ENST00000560970 COX7BP24311 80 aa6.18□□□□□ -1.42
TPM1-227ENST00000560970 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
TPM1-227ENST00000560970 H3BQ85 93 aa6.17□□□□□ -1.42
TPM1-227ENST00000560970 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
TPM1-227ENST00000560970 ST20-AS1Q8NBB2 130 aa6.17□□□□□ -1.42
TPM1-227ENST00000560970 ORMDL1Q9P0S3 153 aa6.17□□□□□ -1.42
TPM1-227ENST00000560970 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
TPM1-227ENST00000560970 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
TPM1-227ENST00000560970 hADV29S1A0JD25 119 aa6.16□□□□□ -1.42
TPM1-227ENST00000560970 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
TPM1-227ENST00000560970 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.14□□□□□ -1.43
TPM1-227ENST00000560970 IGLV9-49A0A0B4J1Y8 123 aa6.13□□□□□ -1.43
TPM1-227ENST00000560970 TMEM256-PLSCR3K7ERE1 68 aa6.13□□□□□ -1.43
TPM1-227ENST00000560970 MOBPQ13875 183 aa6.13□□□□□ -1.43
TPM1-227ENST00000560970 DHRS4-AS1Q9P1J3 65 aa6.13□□□□□ -1.43
TPM1-227ENST00000560970 TEX49A0A1B0GTD5 131 aa6.12□□□□□ -1.43
TPM1-227ENST00000560970 Q8NBF4 154 aa6.12□□□□□ -1.43
TPM1-227ENST00000560970 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
TPM1-227ENST00000560970 OBSCN-AS1Q96MR7 158 aa6.11□□□□□ -1.43
TPM1-227ENST00000560970 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
TPM1-227ENST00000560970 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
TPM1-227ENST00000560970 SPRR1BP22528 89 aa6.1□□□□□ -1.43
TPM1-227ENST00000560970 SPAG11AQ6PDA7 123 aa6.1□□□□□ -1.43
TPM1-227ENST00000560970 Q6ZQY7 126 aa6.1□□□□□ -1.43
TPM1-227ENST00000560970 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.43
TPM1-227ENST00000560970 VPS25Q9BRG1 176 aa6.09□□□□□ -1.43
TPM1-227ENST00000560970 C9orf153Q5TBE3 101 aa6.08□□□□□ -1.44
TPM1-227ENST00000560970 ACYP1P07311 99 aa6.07□□□□□ -1.44
TPM1-227ENST00000560970 DEFB105AQ8NG35 78 aa6.07□□□□□ -1.44
TPM1-227ENST00000560970 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
TPM1-227ENST00000560970 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
TPM1-227ENST00000560970 IGLV5-48A0A075B6I7 105 aa6.05□□□□□ -1.44
TPM1-227ENST00000560970 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
TPM1-227ENST00000560970 SMIM29Q86T20 159 aa6.05□□□□□ -1.44
TPM1-227ENST00000560970 Q8N377 158 aa6.04□□□□□ -1.44
TPM1-227ENST00000560970 C14orf132Q9NPU4 83 aa6.04□□□□□ -1.44
TPM1-227ENST00000560970 LAMTOR3Q9UHA4 124 aa6.03□□□□□ -1.44
TPM1-227ENST00000560970 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.45
TPM1-227ENST00000560970 SPINK1P00995 79 aa6.02□□□□□ -1.45
TPM1-227ENST00000560970 PDE6GP18545 87 aa6.02□□□□□ -1.45
TPM1-227ENST00000560970 RBM3P98179 157 aaKnown RBP6.02□□□□□ -1.45
TPM1-227ENST00000560970 CCKP06307 115 aa6.01□□□□□ -1.45
TPM1-227ENST00000560970 NDUFV3P56181 108 aaKnown RBP6.01□□□□□ -1.45
TPM1-227ENST00000560970 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
TPM1-227ENST00000560970 A0A0G2JQZ4 141 aa6□□□□□ -1.45
TPM1-227ENST00000560970 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
TPM1-227ENST00000560970 HRCT1Q6UXD1 115 aa6□□□□□ -1.45
TPM1-227ENST00000560970 DSCR8Q96T75 97 aa6□□□□□ -1.45
TPM1-227ENST00000560970 Q6ZQT0 140 aa5.99□□□□□ -1.45
TPM1-227ENST00000560970 SIGMAR1Q99720 223 aa5.99□□□□□ -1.45
TPM1-227ENST00000560970 TRBV7-4A0A0J9YYF1 115 aa5.98□□□□□ -1.45
TPM1-227ENST00000560970 A0A1B0GV72 72 aa5.98□□□□□ -1.45
TPM1-227ENST00000560970 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
TPM1-227ENST00000560970 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
TPM1-227ENST00000560970 LINC00643Q86TS7 51 aa5.96□□□□□ -1.46
TPM1-227ENST00000560970 F8WEM9 126 aa5.94□□□□□ -1.46
TPM1-227ENST00000560970 XP32Q5T750 250 aa5.94□□□□□ -1.46
TPM1-227ENST00000560970 IGLV8-61A0A075B6I0 122 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms