RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 RPL37AP61513 92 aaKnown RBP3.31□□□□□ -1.88
ZEB1-220ENST00000560909 C1orf137Q5JT78 98 aa3.31□□□□□ -1.88
ZEB1-220ENST00000560909 LINC00575Q6W349 94 aa3.31□□□□□ -1.88
ZEB1-220ENST00000560909 SMCR5Q8TEV8 140 aa3.31□□□□□ -1.88
ZEB1-220ENST00000560909 MYCBP2O75592 4640 aa3.31□□□□□ -1.88
ZEB1-220ENST00000560909 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
ZEB1-220ENST00000560909 ETDCA0A1B0GVM5 59 aa3.3□□□□□ -1.88
ZEB1-220ENST00000560909 VAMP3Q15836 100 aa3.3□□□□□ -1.88
ZEB1-220ENST00000560909 SPINK6Q6UWN8 80 aa3.3□□□□□ -1.88
ZEB1-220ENST00000560909 DHRS4-AS1Q9P1J3 65 aa3.3□□□□□ -1.88
ZEB1-220ENST00000560909 FLG2Q5D862 2391 aaPredicted RBP3.29□□□□□ -1.88
ZEB1-220ENST00000560909 H7C2G1 150 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 ERC2-IT1O76042 136 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 COX6CP09669 75 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 SPRR1BP22528 89 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 BATFQ16520 125 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 Q5VSD8 79 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 FAM19A1Q7Z5A9 133 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
ZEB1-220ENST00000560909 TNXBP22105 4242 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 IGLV5-48A0A075B6I7 105 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 LST1O00453 97 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 TRACP01848 142 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 UBE2AP49459 152 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 LINC01547P58512 204 aaPredicted RBP3.28□□□□□ -1.88
ZEB1-220ENST00000560909 PRLHP81277 87 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 Q1RN00 199 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
ZEB1-220ENST00000560909 TRBV20-1A0A075B6N2 111 aa3.27□□□□□ -1.89
ZEB1-220ENST00000560909 A0A1W2PPM0 123 aa3.27□□□□□ -1.89
ZEB1-220ENST00000560909 hADV29S1A0JD25 119 aa3.27□□□□□ -1.89
ZEB1-220ENST00000560909 H3BUT2 72 aa3.27□□□□□ -1.89
ZEB1-220ENST00000560909 PSMB2P49721 201 aa3.27□□□□□ -1.89
ZEB1-220ENST00000560909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.27□□□□□ -1.89
ZEB1-220ENST00000560909 LINC01600Q96MT4 127 aa3.27□□□□□ -1.89
ZEB1-220ENST00000560909 SPRR4Q96PI1 79 aa3.27□□□□□ -1.89
ZEB1-220ENST00000560909 SLC25A20O43772 301 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 TCL1BO95988 128 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 FABP2P12104 132 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 FAM229BQ4G0N7 80 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 OCIAD2Q56VL3 154 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 LYRM7Q5U5X0 104 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 Q8N377 158 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 PPDPFLQ8WWR9 84 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 CLEC2BQ92478 149 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 NAA38Q9BRA0 125 aaKnown RBP3.26□□□□□ -1.89
ZEB1-220ENST00000560909 HIGD2AQ9BW72 106 aa3.26□□□□□ -1.89
ZEB1-220ENST00000560909 H3BQ85 93 aa3.25□□□□□ -1.89
ZEB1-220ENST00000560909 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
ZEB1-220ENST00000560909 ATXN8Q156A1 80 aa3.25□□□□□ -1.89
ZEB1-220ENST00000560909 Q6ZQY7 126 aa3.25□□□□□ -1.89
ZEB1-220ENST00000560909 SMIM29Q86T20 159 aa3.25□□□□□ -1.89
ZEB1-220ENST00000560909 ST20-AS1Q8NBB2 130 aa3.25□□□□□ -1.89
ZEB1-220ENST00000560909 ZNF706Q9Y5V0 76 aaPredicted RBP3.25□□□□□ -1.89
ZEB1-220ENST00000560909 IGLV8-61A0A075B6I0 122 aa3.24□□□□□ -1.89
ZEB1-220ENST00000560909 TEX49A0A1B0GTD5 131 aa3.24□□□□□ -1.89
ZEB1-220ENST00000560909 SNCGO76070 127 aa3.24□□□□□ -1.89
ZEB1-220ENST00000560909 K7EP34 96 aa3.23□□□□□ -1.89
ZEB1-220ENST00000560909 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
ZEB1-220ENST00000560909 UBE2V1Q13404 147 aa3.23□□□□□ -1.89
ZEB1-220ENST00000560909 PRO0461Q9UI25 63 aa3.23□□□□□ -1.89
ZEB1-220ENST00000560909 SPCS1Q9Y6A9 102 aa3.23□□□□□ -1.89
ZEB1-220ENST00000560909 HERC1Q15751 4861 aa3.23□□□□□ -1.89
ZEB1-220ENST00000560909 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
ZEB1-220ENST00000560909 A0A087X002 238 aa3.22□□□□□ -1.89
ZEB1-220ENST00000560909 TMEM256-PLSCR3K7ERE1 68 aa3.22□□□□□ -1.89
ZEB1-220ENST00000560909 OXTP01178 125 aa3.22□□□□□ -1.89
ZEB1-220ENST00000560909 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
ZEB1-220ENST00000560909 GAGE2AQ6NT46 116 aa3.22□□□□□ -1.89
ZEB1-220ENST00000560909 ORMDL1Q9P0S3 153 aa3.22□□□□□ -1.89
ZEB1-220ENST00000560909 H3BMG7 143 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 H3BT86 120 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 DNAL4O96015 105 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 BAALC-AS2P0C853 105 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 MT1HL1P0DM35 61 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 CRYGAP11844 174 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 SSBP3-AS1Q7Z2R9 100 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 OBSCN-AS1Q96MR7 158 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.9
ZEB1-220ENST00000560909 C9JAW5 83 aa3.2□□□□□ -1.9
ZEB1-220ENST00000560909 GTF2H5Q6ZYL4 71 aa3.2□□□□□ -1.9
ZEB1-220ENST00000560909 LAMTOR3Q9UHA4 124 aa3.2□□□□□ -1.9
ZEB1-220ENST00000560909 A0A1B0GV90 55 aa3.19□□□□□ -1.9
ZEB1-220ENST00000560909 NDUFV3P56181 108 aaKnown RBP3.19□□□□□ -1.9
ZEB1-220ENST00000560909 C3orf22Q8N5N4 141 aa3.19□□□□□ -1.9
ZEB1-220ENST00000560909 ANKRD29Q8N6D5 301 aa3.19□□□□□ -1.9
ZEB1-220ENST00000560909 PRR26Q8N8Z3 221 aa3.19□□□□□ -1.9
ZEB1-220ENST00000560909 DEFB105AQ8NG35 78 aa3.19□□□□□ -1.9
ZEB1-220ENST00000560909 TRBV7-4A0A0J9YYF1 115 aa3.18□□□□□ -1.9
ZEB1-220ENST00000560909 F8W1H4 67 aa3.18□□□□□ -1.9
ZEB1-220ENST00000560909 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
ZEB1-220ENST00000560909 Q6JHZ5 121 aa3.18□□□□□ -1.9
ZEB1-220ENST00000560909 Q8NBF4 154 aa3.18□□□□□ -1.9
ZEB1-220ENST00000560909 JMJD7-PLA2G4BH0Y9G9 81 aa3.17□□□□□ -1.9
ZEB1-220ENST00000560909 CD164Q04900 197 aa3.17□□□□□ -1.9
ZEB1-220ENST00000560909 Q6Q795 121 aa3.17□□□□□ -1.9
ZEB1-220ENST00000560909 LOC110117498A0A087WWA1 95 aa3.16□□□□□ -1.9
ZEB1-220ENST00000560909 RPS29P62273 56 aaKnown RBP3.16□□□□□ -1.9
ZEB1-220ENST00000560909 RBM3P98179 157 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms