RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 ANKRD29Q8N6D5 301 aa4.92□□□□□ -1.62
SNRPA1-208ENST00000559686 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
SNRPA1-208ENST00000559686 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
SNRPA1-208ENST00000559686 FLGP20930 4061 aaPredicted RBP4.91□□□□□ -1.62
SNRPA1-208ENST00000559686 IGLV4-3A0A075B6K6 122 aa4.91□□□□□ -1.62
SNRPA1-208ENST00000559686 F8VRH5 84 aa4.91□□□□□ -1.62
SNRPA1-208ENST00000559686 Q8IZM0 81 aa4.91□□□□□ -1.62
SNRPA1-208ENST00000559686 TMEM141Q96I45 108 aa4.91□□□□□ -1.62
SNRPA1-208ENST00000559686 IGLV5-39A0A0G2JS06 123 aa4.9□□□□□ -1.63
SNRPA1-208ENST00000559686 TRACP01848 142 aa4.9□□□□□ -1.63
SNRPA1-208ENST00000559686 CKS2P33552 79 aa4.9□□□□□ -1.63
SNRPA1-208ENST00000559686 COX6B2Q6YFQ2 88 aa4.9□□□□□ -1.63
SNRPA1-208ENST00000559686 SMIM2Q9BVW6 85 aa4.9□□□□□ -1.63
SNRPA1-208ENST00000559686 GNB1LQ9BYB4 327 aa4.9□□□□□ -1.63
SNRPA1-208ENST00000559686 SPINK1P00995 79 aa4.89□□□□□ -1.63
SNRPA1-208ENST00000559686 COX7CP15954 63 aa4.89□□□□□ -1.63
SNRPA1-208ENST00000559686 RPL23P62829 140 aaKnown RBP4.89□□□□□ -1.63
SNRPA1-208ENST00000559686 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
SNRPA1-208ENST00000559686 SPRR4Q96PI1 79 aa4.89□□□□□ -1.63
SNRPA1-208ENST00000559686 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
SNRPA1-208ENST00000559686 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
SNRPA1-208ENST00000559686 M0R378 163 aa4.88□□□□□ -1.63
SNRPA1-208ENST00000559686 NPYP01303 97 aa4.88□□□□□ -1.63
SNRPA1-208ENST00000559686 FAM104BQ5XKR9 115 aa4.88□□□□□ -1.63
SNRPA1-208ENST00000559686 PRR15Q8IV56 129 aa4.88□□□□□ -1.63
SNRPA1-208ENST00000559686 Q8N377 158 aa4.88□□□□□ -1.63
SNRPA1-208ENST00000559686 COPS9Q8WXC6 57 aa4.88□□□□□ -1.63
SNRPA1-208ENST00000559686 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
SNRPA1-208ENST00000559686 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
SNRPA1-208ENST00000559686 D6R8Y8 96 aa4.87□□□□□ -1.63
SNRPA1-208ENST00000559686 KRTAP4-16G5E9R7 235 aaPredicted RBP4.87□□□□□ -1.63
SNRPA1-208ENST00000559686 SMIM7Q9BQ49 75 aa4.87□□□□□ -1.63
SNRPA1-208ENST00000559686 CDKN2A-AS1Q9UH64 79 aa4.87□□□□□ -1.63
SNRPA1-208ENST00000559686 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
SNRPA1-208ENST00000559686 MOBPQ13875 183 aa4.85□□□□□ -1.63
SNRPA1-208ENST00000559686 FAM19A2Q8N3H0 131 aa4.85□□□□□ -1.63
SNRPA1-208ENST00000559686 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
SNRPA1-208ENST00000559686 TRBV7-6A0A0J9YX20 115 aa4.84□□□□□ -1.63
SNRPA1-208ENST00000559686 LOC389332A0A1B0GUA5 103 aa4.84□□□□□ -1.63
SNRPA1-208ENST00000559686 SLC25A20O43772 301 aa4.84□□□□□ -1.63
SNRPA1-208ENST00000559686 CEND1Q8N111 149 aa4.84□□□□□ -1.63
SNRPA1-208ENST00000559686 HIST1H4GQ99525 98 aa4.84□□□□□ -1.63
SNRPA1-208ENST00000559686 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.63
SNRPA1-208ENST00000559686 ATOX1O00244 68 aa4.83□□□□□ -1.64
SNRPA1-208ENST00000559686 CXCL5P42830 114 aa4.83□□□□□ -1.64
SNRPA1-208ENST00000559686 LINC01545Q5VT33 79 aa4.83□□□□□ -1.64
SNRPA1-208ENST00000559686 COX7B2Q8TF08 81 aa4.83□□□□□ -1.64
SNRPA1-208ENST00000559686 AMELXQ99217 191 aa4.83□□□□□ -1.64
SNRPA1-208ENST00000559686 V9GYV3 84 aa4.83□□□□□ -1.64
SNRPA1-208ENST00000559686 PSMB2P49721 201 aa4.82□□□□□ -1.64
SNRPA1-208ENST00000559686 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
SNRPA1-208ENST00000559686 CHCHD1Q96BP2 118 aaKnown RBP4.82□□□□□ -1.64
SNRPA1-208ENST00000559686 OSTCQ9NRP0 149 aa4.82□□□□□ -1.64
SNRPA1-208ENST00000559686 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
SNRPA1-208ENST00000559686 IGKCP01834 107 aa4.81□□□□□ -1.64
SNRPA1-208ENST00000559686 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
SNRPA1-208ENST00000559686 Q8NDZ9 215 aa4.81□□□□□ -1.64
SNRPA1-208ENST00000559686 SMCR5Q8TEV8 140 aa4.81□□□□□ -1.64
SNRPA1-208ENST00000559686 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
SNRPA1-208ENST00000559686 H3BT86 120 aa4.8□□□□□ -1.64
SNRPA1-208ENST00000559686 NDUFS5O43920 106 aa4.8□□□□□ -1.64
SNRPA1-208ENST00000559686 NPC2P61916 151 aa4.8□□□□□ -1.64
SNRPA1-208ENST00000559686 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
SNRPA1-208ENST00000559686 SND1-IT1Q9HBX3 110 aa4.8□□□□□ -1.64
SNRPA1-208ENST00000559686 A0A1B0GXF2 115 aa4.79□□□□□ -1.64
SNRPA1-208ENST00000559686 ACYP1P07311 99 aa4.79□□□□□ -1.64
SNRPA1-208ENST00000559686 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
SNRPA1-208ENST00000559686 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
SNRPA1-208ENST00000559686 TCL1BO95988 128 aa4.78□□□□□ -1.64
SNRPA1-208ENST00000559686 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
SNRPA1-208ENST00000559686 HIST1H4AP62805 103 aaKnown RBP4.78□□□□□ -1.64
SNRPA1-208ENST00000559686 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
SNRPA1-208ENST00000559686 ORMDL3Q8N138 153 aa4.78□□□□□ -1.64
SNRPA1-208ENST00000559686 IGIPA6NJ69 53 aa4.77□□□□□ -1.65
SNRPA1-208ENST00000559686 C8orf87E5RJ46 101 aa4.77□□□□□ -1.65
SNRPA1-208ENST00000559686 PCP2Q8IVA1 136 aa4.77□□□□□ -1.65
SNRPA1-208ENST00000559686 ZNF625Q96I27 306 aaPredicted RBP4.77□□□□□ -1.65
SNRPA1-208ENST00000559686 SMIM27A0A1W2PRY6 76 aa4.76□□□□□ -1.65
SNRPA1-208ENST00000559686 CFC1P0CG37 223 aa4.76□□□□□ -1.65
SNRPA1-208ENST00000559686 TMEM170BQ5T4T1 132 aa4.76□□□□□ -1.65
SNRPA1-208ENST00000559686 SCGB1D4Q6XE38 83 aa4.76□□□□□ -1.65
SNRPA1-208ENST00000559686 SSBP3-AS1Q7Z2R9 100 aa4.76□□□□□ -1.65
SNRPA1-208ENST00000559686 DSCR8Q96T75 97 aa4.76□□□□□ -1.65
SNRPA1-208ENST00000559686 RBM12B-AS1Q9P1G2 102 aa4.76□□□□□ -1.65
SNRPA1-208ENST00000559686 LEPROTL1O95214 131 aa4.75□□□□□ -1.65
SNRPA1-208ENST00000559686 ATP5EP56381 51 aaPredicted RBP4.75□□□□□ -1.65
SNRPA1-208ENST00000559686 LINC00483Q53H64 154 aa4.75□□□□□ -1.65
SNRPA1-208ENST00000559686 ETDCA0A1B0GVM5 59 aa4.74□□□□□ -1.65
SNRPA1-208ENST00000559686 ERC2-IT1O76042 136 aa4.74□□□□□ -1.65
SNRPA1-208ENST00000559686 IGLV6-57P01721 117 aa4.74□□□□□ -1.65
SNRPA1-208ENST00000559686 FXYD2P54710 66 aa4.74□□□□□ -1.65
SNRPA1-208ENST00000559686 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
SNRPA1-208ENST00000559686 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
SNRPA1-208ENST00000559686 Q8N8P6 123 aa4.74□□□□□ -1.65
SNRPA1-208ENST00000559686 hADV29S1A0JD25 119 aa4.73□□□□□ -1.65
SNRPA1-208ENST00000559686 C6orf99Q4VX62 202 aa4.73□□□□□ -1.65
SNRPA1-208ENST00000559686 ORMDL2Q53FV1 153 aa4.73□□□□□ -1.65
SNRPA1-208ENST00000559686 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
SNRPA1-208ENST00000559686 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
SNRPA1-208ENST00000559686 NCR3O14931 201 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms