RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 Q8NBF4 154 aa12.04□□□□□ -0.48
FOXN3-214ENST00000557258 FRAS1Q86XX4 4008 aa12.02□□□□□ -0.48
FOXN3-214ENST00000557258 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.49
FOXN3-214ENST00000557258 F8WEM9 126 aa12.02□□□□□ -0.49
FOXN3-214ENST00000557258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.02□□□□□ -0.49
FOXN3-214ENST00000557258 IGFL1Q6UW32 110 aa12□□□□□ -0.49
FOXN3-214ENST00000557258 UBE2AP49459 152 aa11.98□□□□□ -0.49
FOXN3-214ENST00000557258 TRAV7A0A075B6U4 112 aa11.98□□□□□ -0.49
FOXN3-214ENST00000557258 C5orf47Q569G3 176 aa11.96□□□□□ -0.49
FOXN3-214ENST00000557258 RPS28P62857 69 aaKnown RBP11.96□□□□□ -0.5
FOXN3-214ENST00000557258 A0A087WSZ3 146 aa11.94□□□□□ -0.5
FOXN3-214ENST00000557258 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
FOXN3-214ENST00000557258 TMEM258P61165 79 aa11.94□□□□□ -0.5
FOXN3-214ENST00000557258 K7EQZ3 153 aa11.93□□□□□ -0.5
FOXN3-214ENST00000557258 A0A087WTM6 91 aa11.92□□□□□ -0.5
FOXN3-214ENST00000557258 OXTP01178 125 aa11.92□□□□□ -0.5
FOXN3-214ENST00000557258 DSCR10P59022 87 aa11.91□□□□□ -0.5
FOXN3-214ENST00000557258 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
FOXN3-214ENST00000557258 DNAH6Q9C0G6 4158 aa11.88□□□□□ -0.51
FOXN3-214ENST00000557258 RPL37AP61513 92 aaKnown RBP11.87□□□□□ -0.51
FOXN3-214ENST00000557258 SPACA4Q8TDM5 124 aa11.87□□□□□ -0.51
FOXN3-214ENST00000557258 RTL8CO15255 209 aa11.86□□□□□ -0.51
FOXN3-214ENST00000557258 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
FOXN3-214ENST00000557258 H7BZZ5 65 aa11.85□□□□□ -0.51
FOXN3-214ENST00000557258 LY6G6CO95867 125 aa11.84□□□□□ -0.51
FOXN3-214ENST00000557258 BCE1O60756 84 aa11.84□□□□□ -0.51
FOXN3-214ENST00000557258 IGLV9-49A0A0B4J1Y8 123 aa11.83□□□□□ -0.51
FOXN3-214ENST00000557258 DNAH8Q96JB1 4490 aa11.83□□□□□ -0.52
FOXN3-214ENST00000557258 OCR1Q9BZK8 76 aa11.83□□□□□ -0.52
FOXN3-214ENST00000557258 C4orf26Q17RF5 130 aa11.83□□□□□ -0.52
FOXN3-214ENST00000557258 ANAPC11Q9NYG5 84 aa11.82□□□□□ -0.52
FOXN3-214ENST00000557258 DNAH17Q9UFH2 4485 aa11.82□□□□□ -0.52
FOXN3-214ENST00000557258 TMEM254Q8TBM7 123 aa11.81□□□□□ -0.52
FOXN3-214ENST00000557258 KLKP1Q107X0 134 aa11.81□□□□□ -0.52
FOXN3-214ENST00000557258 A0A1B0GW54 56 aa11.79□□□□□ -0.52
FOXN3-214ENST00000557258 HRCT1Q6UXD1 115 aa11.79□□□□□ -0.52
FOXN3-214ENST00000557258 Q6ZR54 194 aa11.79□□□□□ -0.52
FOXN3-214ENST00000557258 H0Y9J4 135 aa11.79□□□□□ -0.52
FOXN3-214ENST00000557258 WFDC13Q8IUB5 93 aa11.79□□□□□ -0.52
FOXN3-214ENST00000557258 KRTAP13-1Q8IUC0 172 aa11.78□□□□□ -0.52
FOXN3-214ENST00000557258 IGLV8-61A0A075B6I0 122 aa11.78□□□□□ -0.52
FOXN3-214ENST00000557258 FAM236DA0A1B0GTK5 79 aa11.77□□□□□ -0.53
FOXN3-214ENST00000557258 FAM236CP0DP71 79 aa11.77□□□□□ -0.53
FOXN3-214ENST00000557258 Q5XG85 94 aa11.77□□□□□ -0.53
FOXN3-214ENST00000557258 PSORS1C2Q9UIG4 136 aa11.76□□□□□ -0.53
FOXN3-214ENST00000557258 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
FOXN3-214ENST00000557258 C1orf134Q5TEV5 83 aa11.74□□□□□ -0.53
FOXN3-214ENST00000557258 SPRR1BP22528 89 aa11.73□□□□□ -0.53
FOXN3-214ENST00000557258 HYDINQ4G0P3 5121 aa11.73□□□□□ -0.53
FOXN3-214ENST00000557258 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
FOXN3-214ENST00000557258 HCG22E2RYF7 251 aa11.72□□□□□ -0.53
FOXN3-214ENST00000557258 DNAH11Q96DT5 4516 aa11.71□□□□□ -0.54
FOXN3-214ENST00000557258 A0A0U1RQV1 116 aa11.67□□□□□ -0.54
FOXN3-214ENST00000557258 DNAH5Q8TE73 4624 aa11.67□□□□□ -0.54
FOXN3-214ENST00000557258 KRTAP10-2P60368 255 aa11.65□□□□□ -0.54
FOXN3-214ENST00000557258 MOBPQ13875 183 aa11.64□□□□□ -0.55
FOXN3-214ENST00000557258 LINC00472Q9H8W2 130 aa11.63□□□□□ -0.55
FOXN3-214ENST00000557258 PLAC8Q9NZF1 115 aa11.63□□□□□ -0.55
FOXN3-214ENST00000557258 ALMS1Q8TCU4 4167 aa11.61□□□□□ -0.55
FOXN3-214ENST00000557258 ZNF861PO60384 105 aa11.58□□□□□ -0.56
FOXN3-214ENST00000557258 PRR15Q8IV56 129 aa11.58□□□□□ -0.56
FOXN3-214ENST00000557258 WWC2-AS2Q96NR7 200 aa11.58□□□□□ -0.56
FOXN3-214ENST00000557258 SERP1Q9Y6X1 66 aa11.58□□□□□ -0.56
FOXN3-214ENST00000557258 CASC2Q6XLA1 102 aa11.57□□□□□ -0.56
FOXN3-214ENST00000557258 A8MWP4 228 aa11.56□□□□□ -0.56
FOXN3-214ENST00000557258 NDUFC1O43677 76 aa11.56□□□□□ -0.56
FOXN3-214ENST00000557258 PRR4Q16378 134 aa11.56□□□□□ -0.56
FOXN3-214ENST00000557258 LRP1BQ9NZR2 4599 aa11.55□□□□□ -0.56
FOXN3-214ENST00000557258 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
FOXN3-214ENST00000557258 LINC00483Q53H64 154 aa11.54□□□□□ -0.56
FOXN3-214ENST00000557258 KRTAP29-1A8MX34 341 aaPredicted RBP11.53□□□□□ -0.56
FOXN3-214ENST00000557258 FAT2Q9NYQ8 4349 aa11.53□□□□□ -0.56
FOXN3-214ENST00000557258 Q96NJ1 140 aa11.52□□□□□ -0.57
FOXN3-214ENST00000557258 PKD1P98161 4303 aa11.52□□□□□ -0.57
FOXN3-214ENST00000557258 LINC00336Q6ZUF6 198 aa11.51□□□□□ -0.57
FOXN3-214ENST00000557258 ZNF706Q9Y5V0 76 aaPredicted RBP11.51□□□□□ -0.57
FOXN3-214ENST00000557258 LCE6AA0A183 80 aa11.5□□□□□ -0.57
FOXN3-214ENST00000557258 IGLV7-43P04211 117 aa11.5□□□□□ -0.57
FOXN3-214ENST00000557258 FAM229BQ4G0N7 80 aa11.48□□□□□ -0.57
FOXN3-214ENST00000557258 LINC00208Q96KT6 92 aa11.48□□□□□ -0.57
FOXN3-214ENST00000557258 PKHD1P08F94 4074 aa11.47□□□□□ -0.57
FOXN3-214ENST00000557258 FP248Q71RG6 208 aaPredicted RBP11.47□□□□□ -0.57
FOXN3-214ENST00000557258 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
FOXN3-214ENST00000557258 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
FOXN3-214ENST00000557258 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.58
FOXN3-214ENST00000557258 KRTAP10-1P60331 282 aa11.45□□□□□ -0.58
FOXN3-214ENST00000557258 ZCCHC13Q8WW36 166 aaKnown RBP11.45□□□□□ -0.58
FOXN3-214ENST00000557258 SMIM26A0A096LP01 95 aa11.43□□□□□ -0.58
FOXN3-214ENST00000557258 NDUFB1O75438 58 aa11.43□□□□□ -0.58
FOXN3-214ENST00000557258 A0A087X002 238 aa11.43□□□□□ -0.58
FOXN3-214ENST00000557258 NOTCH2NLQ7Z3S9 236 aa11.43□□□□□ -0.58
FOXN3-214ENST00000557258 hDV103S1A0JD37 113 aa11.42□□□□□ -0.58
FOXN3-214ENST00000557258 H0Y9P7 68 aa11.42□□□□□ -0.58
FOXN3-214ENST00000557258 PRO0628Q9UI54 55 aa11.42□□□□□ -0.58
FOXN3-214ENST00000557258 MP68P56378 58 aa11.41□□□□□ -0.58
FOXN3-214ENST00000557258 VPS13BQ7Z7G8 4022 aa11.41□□□□□ -0.58
FOXN3-214ENST00000557258 NDUFS5O43920 106 aa11.38□□□□□ -0.59
FOXN3-214ENST00000557258 MPLKIPQ8TAP9 179 aa11.38□□□□□ -0.59
FOXN3-214ENST00000557258 ATP5EP56381 51 aaPredicted RBP11.37□□□□□ -0.59
FOXN3-214ENST00000557258 C8orf17Q9NRJ1 99 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms