RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 LAMTOR3Q9UHA4 124 aa6.43□□□□□ -1.38
ACTN1-221ENST00000556571 C9orf92A6NGG3 77 aa6.42□□□□□ -1.38
ACTN1-221ENST00000556571 HIGD1BQ9P298 99 aa6.42□□□□□ -1.38
ACTN1-221ENST00000556571 RAB37Q96AX2 223 aa6.41□□□□□ -1.38
ACTN1-221ENST00000556571 TEX49A0A1B0GTD5 131 aa6.4□□□□□ -1.38
ACTN1-221ENST00000556571 SPRR1BP22528 89 aa6.4□□□□□ -1.38
ACTN1-221ENST00000556571 PYY3Q5JQD4 70 aa6.4□□□□□ -1.38
ACTN1-221ENST00000556571 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
ACTN1-221ENST00000556571 A6NJY4 79 aa6.39□□□□□ -1.39
ACTN1-221ENST00000556571 H7C2G1 150 aa6.39□□□□□ -1.39
ACTN1-221ENST00000556571 Q1RN00 199 aa6.38□□□□□ -1.39
ACTN1-221ENST00000556571 BVES-AS1Q5T3Y7 98 aa6.38□□□□□ -1.39
ACTN1-221ENST00000556571 HRCT1Q6UXD1 115 aa6.38□□□□□ -1.39
ACTN1-221ENST00000556571 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
ACTN1-221ENST00000556571 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
ACTN1-221ENST00000556571 SNCGO76070 127 aa6.37□□□□□ -1.39
ACTN1-221ENST00000556571 LINC00575Q6W349 94 aa6.37□□□□□ -1.39
ACTN1-221ENST00000556571 CEND1Q8N111 149 aa6.37□□□□□ -1.39
ACTN1-221ENST00000556571 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
ACTN1-221ENST00000556571 hADV29S1A0JD25 119 aa6.36□□□□□ -1.39
ACTN1-221ENST00000556571 CFC1P0CG37 223 aa6.36□□□□□ -1.39
ACTN1-221ENST00000556571 IGLV5-48A0A075B6I7 105 aa6.35□□□□□ -1.39
ACTN1-221ENST00000556571 F8WEM9 126 aa6.35□□□□□ -1.39
ACTN1-221ENST00000556571 PRO1933Q9H354 126 aa6.35□□□□□ -1.39
ACTN1-221ENST00000556571 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
ACTN1-221ENST00000556571 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
ACTN1-221ENST00000556571 CD164Q04900 197 aa6.33□□□□□ -1.4
ACTN1-221ENST00000556571 HSD52Q0P140 79 aa6.33□□□□□ -1.4
ACTN1-221ENST00000556571 Q6ZQY7 126 aa6.33□□□□□ -1.4
ACTN1-221ENST00000556571 UQCR10Q9UDW1 63 aa6.33□□□□□ -1.4
ACTN1-221ENST00000556571 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
ACTN1-221ENST00000556571 RPL37P61927 97 aaKnown RBP6.32□□□□□ -1.4
ACTN1-221ENST00000556571 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
ACTN1-221ENST00000556571 H0YGX0 51 aa6.31□□□□□ -1.4
ACTN1-221ENST00000556571 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.31□□□□□ -1.4
ACTN1-221ENST00000556571 FXYD2P54710 66 aa6.3□□□□□ -1.4
ACTN1-221ENST00000556571 Q5XG85 94 aa6.3□□□□□ -1.4
ACTN1-221ENST00000556571 SMIM29Q86T20 159 aa6.3□□□□□ -1.4
ACTN1-221ENST00000556571 PPDPFLQ8WWR9 84 aa6.29□□□□□ -1.4
ACTN1-221ENST00000556571 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
ACTN1-221ENST00000556571 SSPOA2VEC9 5147 aa6.28□□□□□ -1.4
ACTN1-221ENST00000556571 GHRHP01286 108 aa6.28□□□□□ -1.4
ACTN1-221ENST00000556571 PSMB2P49721 201 aa6.28□□□□□ -1.4
ACTN1-221ENST00000556571 OCIAD2Q56VL3 154 aa6.28□□□□□ -1.4
ACTN1-221ENST00000556571 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
ACTN1-221ENST00000556571 Q6JHZ5 121 aa6.26□□□□□ -1.41
ACTN1-221ENST00000556571 USH2AO75445 5202 aa6.26□□□□□ -1.41
ACTN1-221ENST00000556571 K7ERJ3 54 aa6.25□□□□□ -1.41
ACTN1-221ENST00000556571 COX6CP09669 75 aa6.25□□□□□ -1.41
ACTN1-221ENST00000556571 A0A1B0GX51 115 aa6.24□□□□□ -1.41
ACTN1-221ENST00000556571 TRIAP1O43715 76 aa6.24□□□□□ -1.41
ACTN1-221ENST00000556571 SMIM6P0DI80 62 aa6.24□□□□□ -1.41
ACTN1-221ENST00000556571 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
ACTN1-221ENST00000556571 TCL1BO95988 128 aa6.23□□□□□ -1.41
ACTN1-221ENST00000556571 DNAL4O96015 105 aa6.23□□□□□ -1.41
ACTN1-221ENST00000556571 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
ACTN1-221ENST00000556571 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
ACTN1-221ENST00000556571 FABP2P12104 132 aa6.21□□□□□ -1.42
ACTN1-221ENST00000556571 Q6Q795 121 aa6.21□□□□□ -1.42
ACTN1-221ENST00000556571 M0R143 59 aa6.2□□□□□ -1.42
ACTN1-221ENST00000556571 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
ACTN1-221ENST00000556571 H3BQ85 93 aa6.19□□□□□ -1.42
ACTN1-221ENST00000556571 H3BUT2 72 aa6.19□□□□□ -1.42
ACTN1-221ENST00000556571 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
ACTN1-221ENST00000556571 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
ACTN1-221ENST00000556571 TSTD3H0UI37 97 aa6.18□□□□□ -1.42
ACTN1-221ENST00000556571 ORMDL1Q9P0S3 153 aa6.18□□□□□ -1.42
ACTN1-221ENST00000556571 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
ACTN1-221ENST00000556571 TRBV7-7A0A0K0K1E9 115 aa6.17□□□□□ -1.42
ACTN1-221ENST00000556571 H3BMG7 143 aa6.17□□□□□ -1.42
ACTN1-221ENST00000556571 ATP11AUNQ6ZP68 121 aa6.17□□□□□ -1.42
ACTN1-221ENST00000556571 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
ACTN1-221ENST00000556571 TMEM256-PLSCR3K7ERE1 68 aa6.15□□□□□ -1.42
ACTN1-221ENST00000556571 Q75L30 129 aa6.13□□□□□ -1.43
ACTN1-221ENST00000556571 TEN1Q86WV5 123 aa6.13□□□□□ -1.43
ACTN1-221ENST00000556571 SS18L2Q9UHA2 77 aa6.13□□□□□ -1.43
ACTN1-221ENST00000556571 TRACP01848 142 aa6.12□□□□□ -1.43
ACTN1-221ENST00000556571 A0A1B0GV72 72 aa6.11□□□□□ -1.43
ACTN1-221ENST00000556571 LOC105371267A0A1B0GV96 52 aa6.11□□□□□ -1.43
ACTN1-221ENST00000556571 LST1O00453 97 aa6.11□□□□□ -1.43
ACTN1-221ENST00000556571 ANKRD29Q8N6D5 301 aa6.11□□□□□ -1.43
ACTN1-221ENST00000556571 OBSCN-AS1Q96MR7 158 aa6.11□□□□□ -1.43
ACTN1-221ENST00000556571 BATFQ16520 125 aa6.1□□□□□ -1.43
ACTN1-221ENST00000556571 UBE2V1Q13404 147 aa6.09□□□□□ -1.43
ACTN1-221ENST00000556571 LYRM7Q5U5X0 104 aa6.09□□□□□ -1.43
ACTN1-221ENST00000556571 A0A087WSZ3 146 aa6.08□□□□□ -1.44
ACTN1-221ENST00000556571 ATXN8Q156A1 80 aa6.08□□□□□ -1.44
ACTN1-221ENST00000556571 NAA38Q9BRA0 125 aaKnown RBP6.07□□□□□ -1.44
ACTN1-221ENST00000556571 TRBV20-1A0A075B6N2 111 aa6.06□□□□□ -1.44
ACTN1-221ENST00000556571 BAALC-AS2P0C853 105 aa6.06□□□□□ -1.44
ACTN1-221ENST00000556571 TRBV7-4A0A0J9YYF1 115 aa6.05□□□□□ -1.44
ACTN1-221ENST00000556571 CCKP06307 115 aa6.05□□□□□ -1.44
ACTN1-221ENST00000556571 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
ACTN1-221ENST00000556571 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
ACTN1-221ENST00000556571 A0A1W2PNM2 257 aa6.04□□□□□ -1.44
ACTN1-221ENST00000556571 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
ACTN1-221ENST00000556571 Q96NJ1 140 aa6.04□□□□□ -1.44
ACTN1-221ENST00000556571 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
ACTN1-221ENST00000556571 MT2AP02795 61 aa6.03□□□□□ -1.44
ACTN1-221ENST00000556571 VPS25Q9BRG1 176 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms