RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
TDP1-213ENST00000555880 OCR1Q9BZK8 76 aa4.47□□□□□ -1.69
TDP1-213ENST00000555880 SPRR4Q96PI1 79 aa4.47□□□□□ -1.69
TDP1-213ENST00000555880 ANK2Q01484 3957 aa4.47□□□□□ -1.69
TDP1-213ENST00000555880 C16orf90A8MZG2 172 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 CNBPP62633 177 aaKnown RBP4.45□□□□□ -1.7
TDP1-213ENST00000555880 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 UBE2DNLQ8IWF7 75 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 STAB2Q8WWQ8 2551 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 IGKV2-24A0A0C4DH68 120 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 EPM2AB3EWF7 344 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 SMIM29Q86T20 159 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 LINC00476Q8WZB0 136 aa4.45□□□□□ -1.7
TDP1-213ENST00000555880 A0A096LNI7 61 aa4.44□□□□□ -1.7
TDP1-213ENST00000555880 A0A0U1RQV1 116 aa4.44□□□□□ -1.7
TDP1-213ENST00000555880 PLA2G1BP04054 148 aaKnown RBP4.44□□□□□ -1.7
TDP1-213ENST00000555880 Q5XG85 94 aa4.44□□□□□ -1.7
TDP1-213ENST00000555880 PKIGQ9Y2B9 76 aa4.44□□□□□ -1.7
TDP1-213ENST00000555880 DNAH3Q8TD57 4116 aa4.44□□□□□ -1.7
TDP1-213ENST00000555880 MGAM2Q2M2H8 2515 aa4.44□□□□□ -1.7
TDP1-213ENST00000555880 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
TDP1-213ENST00000555880 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
TDP1-213ENST00000555880 HIGD2AQ9BW72 106 aa4.43□□□□□ -1.7
TDP1-213ENST00000555880 CMYA5Q8N3K9 4069 aa4.43□□□□□ -1.7
TDP1-213ENST00000555880 PRLHP81277 87 aa4.43□□□□□ -1.7
TDP1-213ENST00000555880 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
TDP1-213ENST00000555880 UBE2AP49459 152 aa4.42□□□□□ -1.7
TDP1-213ENST00000555880 DSCR10P59022 87 aa4.42□□□□□ -1.7
TDP1-213ENST00000555880 HRCT1Q6UXD1 115 aa4.42□□□□□ -1.7
TDP1-213ENST00000555880 B9D2Q9BPU9 175 aa4.42□□□□□ -1.7
TDP1-213ENST00000555880 K7EQZ3 153 aa4.41□□□□□ -1.7
TDP1-213ENST00000555880 IGFL1Q6UW32 110 aa4.41□□□□□ -1.7
TDP1-213ENST00000555880 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
TDP1-213ENST00000555880 DNHD1Q96M86 4753 aa4.41□□□□□ -1.7
TDP1-213ENST00000555880 IGLV8-61A0A075B6I0 122 aa4.41□□□□□ -1.7
TDP1-213ENST00000555880 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.41□□□□□ -1.7
TDP1-213ENST00000555880 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
TDP1-213ENST00000555880 HCG22E2RYF7 251 aa4.41□□□□□ -1.7
TDP1-213ENST00000555880 LCE6AA0A183 80 aa4.4□□□□□ -1.71
TDP1-213ENST00000555880 A0A087WSZ3 146 aa4.39□□□□□ -1.71
TDP1-213ENST00000555880 H0Y9J4 135 aa4.39□□□□□ -1.71
TDP1-213ENST00000555880 LINC00474Q9P2X8 69 aa4.39□□□□□ -1.71
TDP1-213ENST00000555880 APLNQ9ULZ1 77 aa4.39□□□□□ -1.71
TDP1-213ENST00000555880 PHF5AQ7RTV0 110 aaKnown RBP4.38□□□□□ -1.71
TDP1-213ENST00000555880 A0A0G2JQZ4 141 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 CHTF8P0CG12 524 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 COL7A1Q02388 2944 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 SPRR1BP22528 89 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 MP68P56378 58 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 FP248Q71RG6 208 aaPredicted RBP4.37□□□□□ -1.71
TDP1-213ENST00000555880 C9orf163Q8N9P6 203 aa4.37□□□□□ -1.71
TDP1-213ENST00000555880 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
TDP1-213ENST00000555880 NUPR2A6NF83 97 aa4.36□□□□□ -1.71
TDP1-213ENST00000555880 NDUFB1O75438 58 aa4.36□□□□□ -1.71
TDP1-213ENST00000555880 WFDC13Q8IUB5 93 aa4.36□□□□□ -1.71
TDP1-213ENST00000555880 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
TDP1-213ENST00000555880 NBDYA0A0U1RRE5 68 aa4.35□□□□□ -1.71
TDP1-213ENST00000555880 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
TDP1-213ENST00000555880 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.71
TDP1-213ENST00000555880 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
TDP1-213ENST00000555880 LRCOL1A6NCL2 159 aa4.33□□□□□ -1.72
TDP1-213ENST00000555880 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
TDP1-213ENST00000555880 KRTAP11-1Q8IUC1 163 aa4.33□□□□□ -1.72
TDP1-213ENST00000555880 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
TDP1-213ENST00000555880 A8MWP4 228 aa4.32□□□□□ -1.72
TDP1-213ENST00000555880 RPL37AP61513 92 aaKnown RBP4.32□□□□□ -1.72
TDP1-213ENST00000555880 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
TDP1-213ENST00000555880 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
TDP1-213ENST00000555880 FAM229BQ4G0N7 80 aa4.32□□□□□ -1.72
TDP1-213ENST00000555880 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
TDP1-213ENST00000555880 KRTAP29-1A8MX34 341 aaPredicted RBP4.31□□□□□ -1.72
TDP1-213ENST00000555880 H3BPC8 53 aa4.31□□□□□ -1.72
TDP1-213ENST00000555880 LINC00472Q9H8W2 130 aa4.31□□□□□ -1.72
TDP1-213ENST00000555880 LINC00336Q6ZUF6 198 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 C1orf64Q8NEQ6 169 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 LINC00208Q96KT6 92 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 H0Y9P7 68 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 SPACA4Q8TDM5 124 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 CYP4F30PQ9H0H9 118 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 ZNF706Q9Y5V0 76 aaPredicted RBP4.3□□□□□ -1.72
TDP1-213ENST00000555880 FBN3Q75N90 2809 aa4.3□□□□□ -1.72
TDP1-213ENST00000555880 Q6ZRN7 208 aaPredicted RBP4.29□□□□□ -1.72
TDP1-213ENST00000555880 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
TDP1-213ENST00000555880 IGLV9-49A0A0B4J1Y8 123 aa4.28□□□□□ -1.72
TDP1-213ENST00000555880 LYSTQ99698 3801 aa4.28□□□□□ -1.72
TDP1-213ENST00000555880 DNAH10Q8IVF4 4471 aa4.28□□□□□ -1.72
TDP1-213ENST00000555880 PANO1I0J062 215 aa4.28□□□□□ -1.72
TDP1-213ENST00000555880 PRR4Q16378 134 aa4.28□□□□□ -1.72
TDP1-213ENST00000555880 BRK1Q8WUW1 75 aa4.28□□□□□ -1.72
TDP1-213ENST00000555880 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
TDP1-213ENST00000555880 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
TDP1-213ENST00000555880 MEGF8Q7Z7M0 2845 aa4.27□□□□□ -1.73
TDP1-213ENST00000555880 DNAH9Q9NYC9 4486 aa4.26□□□□□ -1.73
TDP1-213ENST00000555880 SEC61GP60059 68 aa4.26□□□□□ -1.73
TDP1-213ENST00000555880 Q1T7F1 81 aa4.26□□□□□ -1.73
TDP1-213ENST00000555880 A0A087WTM6 91 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms