RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 TRBV7-6A0A0J9YX20 115 aa4.7□□□□□ -1.66
SCFD1-215ENST00000555259 TRBV7-7A0A0K0K1E9 115 aa4.7□□□□□ -1.66
SCFD1-215ENST00000555259 PLNP26678 52 aa4.7□□□□□ -1.66
SCFD1-215ENST00000555259 HERVK_113P61574 105 aa4.7□□□□□ -1.66
SCFD1-215ENST00000555259 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
SCFD1-215ENST00000555259 A0A1B0GWB2 263 aa4.7□□□□□ -1.66
SCFD1-215ENST00000555259 TMEM218A2RU14 115 aa4.7□□□□□ -1.66
SCFD1-215ENST00000555259 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
SCFD1-215ENST00000555259 LITAFQ99732 161 aa4.69□□□□□ -1.66
SCFD1-215ENST00000555259 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
SCFD1-215ENST00000555259 F8WEM9 126 aa4.68□□□□□ -1.66
SCFD1-215ENST00000555259 HRES1P13985 223 aa4.68□□□□□ -1.66
SCFD1-215ENST00000555259 LINC00518Q8N0U6 118 aa4.67□□□□□ -1.66
SCFD1-215ENST00000555259 CLEC2BQ92478 149 aa4.67□□□□□ -1.66
SCFD1-215ENST00000555259 DPM2O94777 84 aa4.66□□□□□ -1.66
SCFD1-215ENST00000555259 PMCHL2Q9BQD1 86 aa4.66□□□□□ -1.66
SCFD1-215ENST00000555259 LST1O00453 97 aa4.65□□□□□ -1.66
SCFD1-215ENST00000555259 HSBP1O75506 76 aa4.65□□□□□ -1.66
SCFD1-215ENST00000555259 Q6JHZ5 121 aa4.65□□□□□ -1.66
SCFD1-215ENST00000555259 UQCC3Q6UW78 93 aa4.65□□□□□ -1.66
SCFD1-215ENST00000555259 IGKCP01834 107 aa4.65□□□□□ -1.67
SCFD1-215ENST00000555259 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-215ENST00000555259 A4D1N5 150 aa4.64□□□□□ -1.67
SCFD1-215ENST00000555259 E9PLD3 99 aa4.64□□□□□ -1.67
SCFD1-215ENST00000555259 TIMM17BO60830 172 aa4.64□□□□□ -1.67
SCFD1-215ENST00000555259 LEPROTL1O95214 131 aa4.64□□□□□ -1.67
SCFD1-215ENST00000555259 NHP2Q9NX24 153 aaKnown RBP4.64□□□□□ -1.67
SCFD1-215ENST00000555259 KMT2DO14686 5537 aa4.63□□□□□ -1.67
SCFD1-215ENST00000555259 CLLU1Q5K131 121 aa4.62□□□□□ -1.67
SCFD1-215ENST00000555259 Q6ZVH6 145 aa4.62□□□□□ -1.67
SCFD1-215ENST00000555259 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
SCFD1-215ENST00000555259 TRAV13-2A0A0B4J235 113 aa4.61□□□□□ -1.67
SCFD1-215ENST00000555259 SERF1AO75920 110 aa4.61□□□□□ -1.67
SCFD1-215ENST00000555259 ZNF815PA8K554 130 aa4.61□□□□□ -1.67
SCFD1-215ENST00000555259 A8MWP4 228 aa4.61□□□□□ -1.67
SCFD1-215ENST00000555259 OCIAD2Q56VL3 154 aa4.61□□□□□ -1.67
SCFD1-215ENST00000555259 A6NDN8 102 aa4.6□□□□□ -1.67
SCFD1-215ENST00000555259 DSCR10P59022 87 aa4.6□□□□□ -1.67
SCFD1-215ENST00000555259 SLC7A5P1Q8MH63 180 aa4.6□□□□□ -1.67
SCFD1-215ENST00000555259 MTURNQ8N3F0 131 aa4.59□□□□□ -1.67
SCFD1-215ENST00000555259 HSPB8Q9UJY1 196 aa4.58□□□□□ -1.68
SCFD1-215ENST00000555259 FABP4P15090 132 aa4.57□□□□□ -1.68
SCFD1-215ENST00000555259 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
SCFD1-215ENST00000555259 Q6ZQY7 126 aa4.57□□□□□ -1.68
SCFD1-215ENST00000555259 SS18L2Q9UHA2 77 aa4.57□□□□□ -1.68
SCFD1-215ENST00000555259 LINC00310P59036 64 aa4.57□□□□□ -1.68
SCFD1-215ENST00000555259 SMIM11BQ8TCY0 68 aa4.57□□□□□ -1.68
SCFD1-215ENST00000555259 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
SCFD1-215ENST00000555259 TTTY13Q9BZ97 58 aa4.56□□□□□ -1.68
SCFD1-215ENST00000555259 LINC00575Q6W349 94 aa4.55□□□□□ -1.68
SCFD1-215ENST00000555259 H3BUT2 72 aa4.54□□□□□ -1.68
SCFD1-215ENST00000555259 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
SCFD1-215ENST00000555259 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
SCFD1-215ENST00000555259 hADV29S1A0JD25 119 aa4.53□□□□□ -1.68
SCFD1-215ENST00000555259 A6NN06 94 aa4.53□□□□□ -1.68
SCFD1-215ENST00000555259 LINC00313P59037 77 aa4.53□□□□□ -1.68
SCFD1-215ENST00000555259 COPS9Q8WXC6 57 aa4.53□□□□□ -1.69
SCFD1-215ENST00000555259 YPEL4Q96NS1 127 aa4.53□□□□□ -1.69
SCFD1-215ENST00000555259 COLCA2A8K830 154 aa4.52□□□□□ -1.69
SCFD1-215ENST00000555259 VAMP3Q15836 100 aa4.52□□□□□ -1.69
SCFD1-215ENST00000555259 A0A087WSZ3 146 aa4.51□□□□□ -1.69
SCFD1-215ENST00000555259 SCGB1D1O95968 90 aa4.51□□□□□ -1.69
SCFD1-215ENST00000555259 IFITM1P13164 125 aa4.51□□□□□ -1.69
SCFD1-215ENST00000555259 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
SCFD1-215ENST00000555259 SNHG12Q9BXW3 62 aa4.51□□□□□ -1.69
SCFD1-215ENST00000555259 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
SCFD1-215ENST00000555259 TEN1Q86WV5 123 aa4.5□□□□□ -1.69
SCFD1-215ENST00000555259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-215ENST00000555259 MUSTN1Q8IVN3 82 aa4.49□□□□□ -1.69
SCFD1-215ENST00000555259 PPDPFLQ8WWR9 84 aa4.49□□□□□ -1.69
SCFD1-215ENST00000555259 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
SCFD1-215ENST00000555259 APOC3P02656 99 aa4.48□□□□□ -1.69
SCFD1-215ENST00000555259 TRGC2P03986 189 aa4.48□□□□□ -1.69
SCFD1-215ENST00000555259 SNAPINO95295 136 aa4.47□□□□□ -1.69
SCFD1-215ENST00000555259 SPINK7P58062 85 aa4.47□□□□□ -1.69
SCFD1-215ENST00000555259 LINC01545Q5VT33 79 aa4.45□□□□□ -1.7
SCFD1-215ENST00000555259 SVBPQ8N300 66 aa4.45□□□□□ -1.7
SCFD1-215ENST00000555259 IGKV4-1P06312 121 aa4.44□□□□□ -1.7
SCFD1-215ENST00000555259 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
SCFD1-215ENST00000555259 A0A1W2PNM2 257 aa4.42□□□□□ -1.7
SCFD1-215ENST00000555259 MT1BP07438 61 aa4.42□□□□□ -1.7
SCFD1-215ENST00000555259 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
SCFD1-215ENST00000555259 NDUFA5Q16718 116 aa4.41□□□□□ -1.7
SCFD1-215ENST00000555259 PET117Q6UWS5 81 aa4.41□□□□□ -1.7
SCFD1-215ENST00000555259 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
SCFD1-215ENST00000555259 IGHV6-1A0A0B4J1U7 121 aa4.4□□□□□ -1.7
SCFD1-215ENST00000555259 KRTAP10-5P60370 271 aa4.4□□□□□ -1.7
SCFD1-215ENST00000555259 NDUFV3P56181 108 aaKnown RBP4.4□□□□□ -1.71
SCFD1-215ENST00000555259 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
SCFD1-215ENST00000555259 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
SCFD1-215ENST00000555259 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
SCFD1-215ENST00000555259 C12orf57Q99622 126 aa4.39□□□□□ -1.71
SCFD1-215ENST00000555259 Q5VV11 94 aa4.38□□□□□ -1.71
SCFD1-215ENST00000555259 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
SCFD1-215ENST00000555259 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
SCFD1-215ENST00000555259 H3BMG7 143 aa4.37□□□□□ -1.71
SCFD1-215ENST00000555259 LINC00472Q9H8W2 130 aa4.36□□□□□ -1.71
SCFD1-215ENST00000555259 C3orf79P0CE67 100 aa4.36□□□□□ -1.71
SCFD1-215ENST00000555259 SPRR2EP22531 72 aa4.36□□□□□ -1.71
SCFD1-215ENST00000555259 SPRR2BP35325 72 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms