RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 NSD1Q96L73 2696 aaPredicted RBP10.03□□□□□ -0.8
SYNE3-203ENST00000554873 IGKV2D-24A0A075B6R9 120 aa10.02□□□□□ -0.8
SYNE3-203ENST00000554873 COA5Q86WW8 74 aa10.02□□□□□ -0.81
SYNE3-203ENST00000554873 J3QKU1 62 aa10.02□□□□□ -0.81
SYNE3-203ENST00000554873 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
SYNE3-203ENST00000554873 C7orf33Q8WU49 177 aa10□□□□□ -0.81
SYNE3-203ENST00000554873 H3BNG1 76 aa9.99□□□□□ -0.81
SYNE3-203ENST00000554873 Q6ZRX8 168 aa9.99□□□□□ -0.81
SYNE3-203ENST00000554873 NKAPP1Q8N9T2 125 aa9.98□□□□□ -0.81
SYNE3-203ENST00000554873 KRTAP29-1A8MX34 341 aaPredicted RBP9.97□□□□□ -0.81
SYNE3-203ENST00000554873 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
SYNE3-203ENST00000554873 FLNBO75369 2602 aaKnown RBP9.95□□□□□ -0.82
SYNE3-203ENST00000554873 PLAC8Q9NZF1 115 aa9.95□□□□□ -0.82
SYNE3-203ENST00000554873 SERTAD4-AS1Q5TG53 156 aa9.94□□□□□ -0.82
SYNE3-203ENST00000554873 IGLV7-46A0A075B6I9 117 aa9.94□□□□□ -0.82
SYNE3-203ENST00000554873 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
SYNE3-203ENST00000554873 OXLD1Q5BKU9 147 aa9.92□□□□□ -0.82
SYNE3-203ENST00000554873 LINC01556Q5JQF7 62 aa9.92□□□□□ -0.82
SYNE3-203ENST00000554873 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
SYNE3-203ENST00000554873 TENM3Q9P273 2699 aa9.91□□□□□ -0.82
SYNE3-203ENST00000554873 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
SYNE3-203ENST00000554873 KRTAP10-11P60412 298 aa9.9□□□□□ -0.82
SYNE3-203ENST00000554873 SPAG11AQ6PDA7 123 aa9.89□□□□□ -0.83
SYNE3-203ENST00000554873 SPRR1AP35321 89 aa9.88□□□□□ -0.83
SYNE3-203ENST00000554873 SPINK7P58062 85 aa9.88□□□□□ -0.83
SYNE3-203ENST00000554873 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
SYNE3-203ENST00000554873 RPL37AP61513 92 aaKnown RBP9.87□□□□□ -0.83
SYNE3-203ENST00000554873 H3BS24 57 aa9.87□□□□□ -0.83
SYNE3-203ENST00000554873 LINC00313P59037 77 aa9.87□□□□□ -0.83
SYNE3-203ENST00000554873 ANK2Q01484 3957 aa9.86□□□□□ -0.83
SYNE3-203ENST00000554873 DEFB131BA0A096LNP1 70 aa9.86□□□□□ -0.83
SYNE3-203ENST00000554873 CNBPP62633 177 aaKnown RBP9.86□□□□□ -0.83
SYNE3-203ENST00000554873 FAM168BA1KXE4 195 aa9.85□□□□□ -0.83
SYNE3-203ENST00000554873 IGFL1Q6UW32 110 aa9.85□□□□□ -0.83
SYNE3-203ENST00000554873 A0A087WSZ3 146 aa9.85□□□□□ -0.83
SYNE3-203ENST00000554873 IGLV1-50A0A075B6I6 118 aa9.84□□□□□ -0.83
SYNE3-203ENST00000554873 A0A0G2JQZ4 141 aa9.83□□□□□ -0.84
SYNE3-203ENST00000554873 A0A1W2PNN7 141 aa9.83□□□□□ -0.84
SYNE3-203ENST00000554873 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
SYNE3-203ENST00000554873 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
SYNE3-203ENST00000554873 DNAH10OSP0CZ25 163 aa9.82□□□□□ -0.84
SYNE3-203ENST00000554873 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
SYNE3-203ENST00000554873 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
SYNE3-203ENST00000554873 PRAC1Q96KF2 57 aa9.81□□□□□ -0.84
SYNE3-203ENST00000554873 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
SYNE3-203ENST00000554873 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
SYNE3-203ENST00000554873 A8MWP4 228 aa9.78□□□□□ -0.84
SYNE3-203ENST00000554873 PCOTHQ58A44 107 aa9.77□□□□□ -0.85
SYNE3-203ENST00000554873 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
SYNE3-203ENST00000554873 BAHCC1Q9P281 2608 aa9.76□□□□□ -0.85
SYNE3-203ENST00000554873 F8P00451 2351 aa9.75□□□□□ -0.85
SYNE3-203ENST00000554873 PLA2G1BP04054 148 aaKnown RBP9.75□□□□□ -0.85
SYNE3-203ENST00000554873 MAST4O15021 2626 aa9.71□□□□□ -0.85
SYNE3-203ENST00000554873 CMYA5Q8N3K9 4069 aa9.71□□□□□ -0.85
SYNE3-203ENST00000554873 HRES1P13985 223 aa9.71□□□□□ -0.85
SYNE3-203ENST00000554873 STAB1Q9NY15 2570 aa9.71□□□□□ -0.86
SYNE3-203ENST00000554873 ASB16-AS1Q495Z4 193 aa9.7□□□□□ -0.86
SYNE3-203ENST00000554873 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
SYNE3-203ENST00000554873 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
SYNE3-203ENST00000554873 DNAH1Q9P2D7 4330 aa9.69□□□□□ -0.86
SYNE3-203ENST00000554873 MMP24-AS1A0A0U1RRL7 71 aa9.69□□□□□ -0.86
SYNE3-203ENST00000554873 REG3GQ6UW15 175 aa9.69□□□□□ -0.86
SYNE3-203ENST00000554873 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
SYNE3-203ENST00000554873 MDFIQ99750 246 aa9.68□□□□□ -0.86
SYNE3-203ENST00000554873 TP53AIP1Q9HCN2 124 aa9.67□□□□□ -0.86
SYNE3-203ENST00000554873 H0Y9J4 135 aa9.65□□□□□ -0.86
SYNE3-203ENST00000554873 A0A087X002 238 aa9.64□□□□□ -0.87
SYNE3-203ENST00000554873 Q6ZR54 194 aa9.64□□□□□ -0.87
SYNE3-203ENST00000554873 DNAH3Q8TD57 4116 aa9.63□□□□□ -0.87
SYNE3-203ENST00000554873 IGKV2-24A0A0C4DH68 120 aa9.63□□□□□ -0.87
SYNE3-203ENST00000554873 FBN1P35555 2871 aaKnown RBP9.62□□□□□ -0.87
SYNE3-203ENST00000554873 KRTAP24-1Q3LI83 254 aa9.62□□□□□ -0.87
SYNE3-203ENST00000554873 PRLHP81277 87 aa9.6□□□□□ -0.87
SYNE3-203ENST00000554873 RTL8CO15255 209 aa9.59□□□□□ -0.87
SYNE3-203ENST00000554873 PRR26Q8N8Z3 221 aa9.59□□□□□ -0.87
SYNE3-203ENST00000554873 A0A096LNI7 61 aa9.58□□□□□ -0.88
SYNE3-203ENST00000554873 DNAH10Q8IVF4 4471 aa9.55□□□□□ -0.88
SYNE3-203ENST00000554873 NBEAL1Q6ZS30 2694 aa9.54□□□□□ -0.88
SYNE3-203ENST00000554873 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
SYNE3-203ENST00000554873 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
SYNE3-203ENST00000554873 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
SYNE3-203ENST00000554873 SRRM2Q9UQ35 2752 aaKnown RBP9.53□□□□□ -0.88
SYNE3-203ENST00000554873 KRTAP11-1Q8IUC1 163 aa9.51□□□□□ -0.89
SYNE3-203ENST00000554873 SPATA8Q6RVD6 105 aa9.5□□□□□ -0.89
SYNE3-203ENST00000554873 SPRR1BP22528 89 aa9.5□□□□□ -0.89
SYNE3-203ENST00000554873 C8orf17Q9NRJ1 99 aa9.49□□□□□ -0.89
SYNE3-203ENST00000554873 LYSTQ99698 3801 aa9.48□□□□□ -0.89
SYNE3-203ENST00000554873 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
SYNE3-203ENST00000554873 K7EIL1 84 aa9.46□□□□□ -0.89
SYNE3-203ENST00000554873 CHTF8P0CG12 524 aa9.46□□□□□ -0.89
SYNE3-203ENST00000554873 ACYP2P14621 99 aa9.45□□□□□ -0.9
SYNE3-203ENST00000554873 DNAH9Q9NYC9 4486 aa9.45□□□□□ -0.9
SYNE3-203ENST00000554873 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
SYNE3-203ENST00000554873 Q96NJ1 140 aa9.43□□□□□ -0.9
SYNE3-203ENST00000554873 A0A1B0GU69 56 aa9.43□□□□□ -0.9
SYNE3-203ENST00000554873 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
SYNE3-203ENST00000554873 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
SYNE3-203ENST00000554873 MRPL34Q9BQ48 92 aaKnown RBP9.41□□□□□ -0.9
SYNE3-203ENST00000554873 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
SYNE3-203ENST00000554873 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms