RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 VAMP3Q15836 100 aa9.82□□□□□ -0.84
FOXN3-204ENST00000553840 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
FOXN3-204ENST00000553840 RAB37Q96AX2 223 aa9.82□□□□□ -0.84
FOXN3-204ENST00000553840 MUC17Q685J3 4493 aa9.82□□□□□ -0.84
FOXN3-204ENST00000553840 H7C2G1 150 aa9.81□□□□□ -0.84
FOXN3-204ENST00000553840 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
FOXN3-204ENST00000553840 CFC1P0CG37 223 aa9.81□□□□□ -0.84
FOXN3-204ENST00000553840 XP32Q5T750 250 aa9.8□□□□□ -0.84
FOXN3-204ENST00000553840 TMEM238LA0A1B0GVL6 79 aa9.79□□□□□ -0.84
FOXN3-204ENST00000553840 A6NJY4 79 aa9.79□□□□□ -0.84
FOXN3-204ENST00000553840 HSD52Q0P140 79 aa9.79□□□□□ -0.84
FOXN3-204ENST00000553840 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
FOXN3-204ENST00000553840 FXYD2P54710 66 aa9.77□□□□□ -0.85
FOXN3-204ENST00000553840 LINC01547P58512 204 aaPredicted RBP9.77□□□□□ -0.85
FOXN3-204ENST00000553840 A0A0B4J2C4 111 aa9.76□□□□□ -0.85
FOXN3-204ENST00000553840 F8WEM9 126 aa9.74□□□□□ -0.85
FOXN3-204ENST00000553840 Q5XG85 94 aa9.74□□□□□ -0.85
FOXN3-204ENST00000553840 LINC00575Q6W349 94 aa9.72□□□□□ -0.85
FOXN3-204ENST00000553840 PRO1854Q9UHT4 67 aa9.72□□□□□ -0.85
FOXN3-204ENST00000553840 hADV29S1A0JD25 119 aa9.71□□□□□ -0.86
FOXN3-204ENST00000553840 C9orf92A6NGG3 77 aa9.71□□□□□ -0.86
FOXN3-204ENST00000553840 BVES-AS1Q5T3Y7 98 aa9.71□□□□□ -0.86
FOXN3-204ENST00000553840 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.86
FOXN3-204ENST00000553840 TCL1BO95988 128 aa9.69□□□□□ -0.86
FOXN3-204ENST00000553840 KRTAP4-1Q9BYQ7 146 aa9.69□□□□□ -0.86
FOXN3-204ENST00000553840 A0A0G2JQZ4 141 aa9.68□□□□□ -0.86
FOXN3-204ENST00000553840 K7ERJ3 54 aa9.68□□□□□ -0.86
FOXN3-204ENST00000553840 C1orf195Q5TG92 126 aa9.67□□□□□ -0.86
FOXN3-204ENST00000553840 Q6ZQY7 126 aa9.67□□□□□ -0.86
FOXN3-204ENST00000553840 Q6JHZ5 121 aa9.65□□□□□ -0.86
FOXN3-204ENST00000553840 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
FOXN3-204ENST00000553840 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
FOXN3-204ENST00000553840 H0YGX0 51 aa9.63□□□□□ -0.87
FOXN3-204ENST00000553840 M0R143 59 aa9.63□□□□□ -0.87
FOXN3-204ENST00000553840 PCOTHQ58A44 107 aa9.63□□□□□ -0.87
FOXN3-204ENST00000553840 PSMB2P49721 201 aa9.62□□□□□ -0.87
FOXN3-204ENST00000553840 PPDPFLQ8WWR9 84 aa9.62□□□□□ -0.87
FOXN3-204ENST00000553840 TRIAP1O43715 76 aa9.61□□□□□ -0.87
FOXN3-204ENST00000553840 SNCGO76070 127 aa9.61□□□□□ -0.87
FOXN3-204ENST00000553840 CLEC2BQ92478 149 aa9.61□□□□□ -0.87
FOXN3-204ENST00000553840 IGLV8-61A0A075B6I0 122 aa9.6□□□□□ -0.87
FOXN3-204ENST00000553840 OCIAD2Q56VL3 154 aa9.6□□□□□ -0.87
FOXN3-204ENST00000553840 SNHG12Q9BXW3 62 aa9.6□□□□□ -0.87
FOXN3-204ENST00000553840 FAM218AQ96MZ4 157 aa9.59□□□□□ -0.87
FOXN3-204ENST00000553840 IGFL1Q6UW32 110 aa9.57□□□□□ -0.88
FOXN3-204ENST00000553840 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
FOXN3-204ENST00000553840 COX6CP09669 75 aa9.56□□□□□ -0.88
FOXN3-204ENST00000553840 BATFQ16520 125 aa9.55□□□□□ -0.88
FOXN3-204ENST00000553840 A0A1B0GX51 115 aa9.53□□□□□ -0.88
FOXN3-204ENST00000553840 SCGB1C2P0DMR2 95 aa9.53□□□□□ -0.88
FOXN3-204ENST00000553840 RPL37P61927 97 aaKnown RBP9.53□□□□□ -0.88
FOXN3-204ENST00000553840 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
FOXN3-204ENST00000553840 COL5A1-AS1Q5SY13 56 aa9.52□□□□□ -0.89
FOXN3-204ENST00000553840 GHRHP01286 108 aa9.5□□□□□ -0.89
FOXN3-204ENST00000553840 DNAL4O96015 105 aa9.49□□□□□ -0.89
FOXN3-204ENST00000553840 H3BUT2 72 aa9.48□□□□□ -0.89
FOXN3-204ENST00000553840 LST1O00453 97 aa9.47□□□□□ -0.89
FOXN3-204ENST00000553840 FABP2P12104 132 aa9.47□□□□□ -0.89
FOXN3-204ENST00000553840 SS18L2Q9UHA2 77 aa9.47□□□□□ -0.89
FOXN3-204ENST00000553840 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
FOXN3-204ENST00000553840 NAA38Q9BRA0 125 aaKnown RBP9.46□□□□□ -0.9
FOXN3-204ENST00000553840 NDUFV3P56181 108 aaKnown RBP9.45□□□□□ -0.9
FOXN3-204ENST00000553840 ORMDL1Q9P0S3 153 aa9.44□□□□□ -0.9
FOXN3-204ENST00000553840 Q6Q795 121 aa9.43□□□□□ -0.9
FOXN3-204ENST00000553840 TEN1Q86WV5 123 aa9.43□□□□□ -0.9
FOXN3-204ENST00000553840 KRTAP19-2Q3LHN2 52 aa9.42□□□□□ -0.9
FOXN3-204ENST00000553840 TRACP01848 142 aa9.41□□□□□ -0.9
FOXN3-204ENST00000553840 OBSCN-AS1Q96MR7 158 aa9.41□□□□□ -0.9
FOXN3-204ENST00000553840 H3BMG7 143 aa9.4□□□□□ -0.9
FOXN3-204ENST00000553840 H3BQ85 93 aa9.39□□□□□ -0.91
FOXN3-204ENST00000553840 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
FOXN3-204ENST00000553840 MT1HP80294 61 aa9.38□□□□□ -0.91
FOXN3-204ENST00000553840 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
FOXN3-204ENST00000553840 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
FOXN3-204ENST00000553840 A0A1B0GV72 72 aa9.36□□□□□ -0.91
FOXN3-204ENST00000553840 ATXN8Q156A1 80 aa9.36□□□□□ -0.91
FOXN3-204ENST00000553840 Q75L30 129 aa9.36□□□□□ -0.91
FOXN3-204ENST00000553840 A0A087WSZ3 146 aa9.35□□□□□ -0.91
FOXN3-204ENST00000553840 LYRM7Q5U5X0 104 aa9.35□□□□□ -0.91
FOXN3-204ENST00000553840 KRTAP9-6A0A140TA67 174 aa9.34□□□□□ -0.91
FOXN3-204ENST00000553840 A0A1B0GV90 55 aa9.34□□□□□ -0.91
FOXN3-204ENST00000553840 Q96NJ1 140 aa9.34□□□□□ -0.91
FOXN3-204ENST00000553840 C9orf118A6NHY6 69 aa9.33□□□□□ -0.92
FOXN3-204ENST00000553840 TAX1BP3O14907 124 aa9.33□□□□□ -0.92
FOXN3-204ENST00000553840 BAALC-AS2P0C853 105 aa9.32□□□□□ -0.92
FOXN3-204ENST00000553840 UBE2V1Q13404 147 aa9.31□□□□□ -0.92
FOXN3-204ENST00000553840 M0R2T5 61 aa9.3□□□□□ -0.92
FOXN3-204ENST00000553840 TRBV20-1A0A075B6N2 111 aa9.29□□□□□ -0.92
FOXN3-204ENST00000553840 ANKRD29Q8N6D5 301 aa9.29□□□□□ -0.92
FOXN3-204ENST00000553840 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
FOXN3-204ENST00000553840 A0A1W2PNM2 257 aa9.26□□□□□ -0.93
FOXN3-204ENST00000553840 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
FOXN3-204ENST00000553840 C20orf166-AS1Q96NR2 134 aa9.25□□□□□ -0.93
FOXN3-204ENST00000553840 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
FOXN3-204ENST00000553840 TRBV7-4A0A0J9YYF1 115 aa9.24□□□□□ -0.93
FOXN3-204ENST00000553840 C9JAW5 83 aa9.24□□□□□ -0.93
FOXN3-204ENST00000553840 RBM3P98179 157 aaKnown RBP9.24□□□□□ -0.93
FOXN3-204ENST00000553840 A8MUU9 505 aa9.22□□□□□ -0.93
FOXN3-204ENST00000553840 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
FOXN3-204ENST00000553840 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms