RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ZFHX3Q15911 3703 aa5.6□□□□□ -1.51
GTF2A1-203ENST00000553612 C14orf177Q52M58 125 aa5.6□□□□□ -1.51
GTF2A1-203ENST00000553612 LCE6AA0A183 80 aa5.6□□□□□ -1.51
GTF2A1-203ENST00000553612 DMXL1Q9Y485 3027 aa5.6□□□□□ -1.51
GTF2A1-203ENST00000553612 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
GTF2A1-203ENST00000553612 ABCA12Q86UK0 2595 aa5.6□□□□□ -1.51
GTF2A1-203ENST00000553612 TACC2O95359 2948 aa5.59□□□□□ -1.51
GTF2A1-203ENST00000553612 ASH1LQ9NR48 2969 aaKnown RBP5.59□□□□□ -1.51
GTF2A1-203ENST00000553612 IGLV5-37A0A075B6J1 123 aa5.59□□□□□ -1.51
GTF2A1-203ENST00000553612 LOC400499M0QZD8 3231 aa5.59□□□□□ -1.51
GTF2A1-203ENST00000553612 CHD8Q9HCK8 2581 aa5.59□□□□□ -1.51
GTF2A1-203ENST00000553612 USP9YO00507 2555 aaPredicted RBP5.59□□□□□ -1.52
GTF2A1-203ENST00000553612 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
GTF2A1-203ENST00000553612 CUBNO60494 3623 aa5.58□□□□□ -1.52
GTF2A1-203ENST00000553612 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
GTF2A1-203ENST00000553612 DMDP11532 3685 aa5.58□□□□□ -1.52
GTF2A1-203ENST00000553612 K7EIL1 84 aa5.58□□□□□ -1.52
GTF2A1-203ENST00000553612 BOD1L1Q8NFC6 3051 aa5.57□□□□□ -1.52
GTF2A1-203ENST00000553612 EYSQ5T1H1 3165 aa5.57□□□□□ -1.52
GTF2A1-203ENST00000553612 A0A1B0GU33 70 aa5.57□□□□□ -1.52
GTF2A1-203ENST00000553612 MAP1AP78559 2803 aaPredicted RBP5.57□□□□□ -1.52
GTF2A1-203ENST00000553612 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
GTF2A1-203ENST00000553612 ADGRG4Q8IZF6 3080 aa5.56□□□□□ -1.52
GTF2A1-203ENST00000553612 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
GTF2A1-203ENST00000553612 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
GTF2A1-203ENST00000553612 C15orf56Q8N910 161 aa5.56□□□□□ -1.52
GTF2A1-203ENST00000553612 LRBAP50851 2863 aa5.56□□□□□ -1.52
GTF2A1-203ENST00000553612 Q96NJ1 140 aa5.55□□□□□ -1.52
GTF2A1-203ENST00000553612 TNRC18O15417 2968 aaPredicted RBP5.55□□□□□ -1.52
GTF2A1-203ENST00000553612 DMXL2Q8TDJ6 3036 aa5.55□□□□□ -1.52
GTF2A1-203ENST00000553612 SMR3AQ99954 134 aa5.55□□□□□ -1.52
GTF2A1-203ENST00000553612 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
GTF2A1-203ENST00000553612 ZZEF1O43149 2961 aa5.53□□□□□ -1.52
GTF2A1-203ENST00000553612 AKAP13Q12802 2813 aa5.53□□□□□ -1.52
GTF2A1-203ENST00000553612 GVQW2A0A096LPI5 108 aaPredicted RBP5.53□□□□□ -1.52
GTF2A1-203ENST00000553612 RELNP78509 3460 aa5.52□□□□□ -1.53
GTF2A1-203ENST00000553612 PIEZO1Q92508 2521 aa5.51□□□□□ -1.53
GTF2A1-203ENST00000553612 LAMA5O15230 3695 aa5.51□□□□□ -1.53
GTF2A1-203ENST00000553612 P0C880 135 aa5.51□□□□□ -1.53
GTF2A1-203ENST00000553612 PSORS1C2Q9UIG4 136 aa5.51□□□□□ -1.53
GTF2A1-203ENST00000553612 SPENQ96T58 3664 aaKnown RBP5.51□□□□□ -1.53
GTF2A1-203ENST00000553612 KRTAP10-9P60411 292 aa5.49□□□□□ -1.53
GTF2A1-203ENST00000553612 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
GTF2A1-203ENST00000553612 COL12A1Q99715 3063 aa5.47□□□□□ -1.53
GTF2A1-203ENST00000553612 ITPR1Q14643 2758 aa5.47□□□□□ -1.53
GTF2A1-203ENST00000553612 GIG44P09565 113 aaPredicted RBP5.47□□□□□ -1.53
GTF2A1-203ENST00000553612 C9orf92A6NGG3 77 aa5.46□□□□□ -1.54
GTF2A1-203ENST00000553612 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
GTF2A1-203ENST00000553612 NCOR2Q9Y618 2525 aa5.44□□□□□ -1.54
GTF2A1-203ENST00000553612 SMG1Q96Q15 3661 aaKnown RBP5.44□□□□□ -1.54
GTF2A1-203ENST00000553612 NBEAL2Q6ZNJ1 2754 aa5.44□□□□□ -1.54
GTF2A1-203ENST00000553612 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
GTF2A1-203ENST00000553612 CSNK1G2-AS1Q8NCQ2 148 aa5.43□□□□□ -1.54
GTF2A1-203ENST00000553612 CHD6Q8TD26 2715 aa5.43□□□□□ -1.54
GTF2A1-203ENST00000553612 LY6G6CO95867 125 aa5.42□□□□□ -1.54
GTF2A1-203ENST00000553612 SVEP1Q4LDE5 3571 aa5.42□□□□□ -1.54
GTF2A1-203ENST00000553612 CEP295Q9C0D2 2601 aa5.4□□□□□ -1.54
GTF2A1-203ENST00000553612 PLAC8Q9NZF1 115 aa5.4□□□□□ -1.54
GTF2A1-203ENST00000553612 A0A087X002 238 aa5.39□□□□□ -1.55
GTF2A1-203ENST00000553612 LINC00472Q9H8W2 130 aa5.39□□□□□ -1.55
GTF2A1-203ENST00000553612 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
GTF2A1-203ENST00000553612 USP24Q9UPU5 2620 aa5.38□□□□□ -1.55
GTF2A1-203ENST00000553612 KRTAP26-1Q6PEX3 210 aa5.38□□□□□ -1.55
GTF2A1-203ENST00000553612 PRR34Q9NV39 138 aa5.38□□□□□ -1.55
GTF2A1-203ENST00000553612 Q5W150 140 aa5.37□□□□□ -1.55
GTF2A1-203ENST00000553612 CHD9Q3L8U1 2897 aa5.35□□□□□ -1.55
GTF2A1-203ENST00000553612 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
GTF2A1-203ENST00000553612 ANKRD11Q6UB99 2663 aaPredicted RBP5.35□□□□□ -1.55
GTF2A1-203ENST00000553612 GCN1Q92616 2671 aaKnown RBP5.35□□□□□ -1.55
GTF2A1-203ENST00000553612 TNP2Q05952 138 aa5.35□□□□□ -1.55
GTF2A1-203ENST00000553612 EPG5Q9HCE0 2579 aa5.35□□□□□ -1.55
GTF2A1-203ENST00000553612 PANO1I0J062 215 aa5.34□□□□□ -1.55
GTF2A1-203ENST00000553612 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
GTF2A1-203ENST00000553612 KLK9Q2XQG4 91 aa5.34□□□□□ -1.55
GTF2A1-203ENST00000553612 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
GTF2A1-203ENST00000553612 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
GTF2A1-203ENST00000553612 A0A087WTM6 91 aa5.3□□□□□ -1.56
GTF2A1-203ENST00000553612 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
GTF2A1-203ENST00000553612 UNC79Q9P2D8 2635 aa5.28□□□□□ -1.56
GTF2A1-203ENST00000553612 BAHCC1Q9P281 2608 aa5.28□□□□□ -1.56
GTF2A1-203ENST00000553612 CENPEQ02224 2701 aa5.26□□□□□ -1.57
GTF2A1-203ENST00000553612 TYMSOSQ8TAI1 123 aa5.26□□□□□ -1.57
GTF2A1-203ENST00000553612 H0YAA0 97 aa5.23□□□□□ -1.57
GTF2A1-203ENST00000553612 TEX15Q9BXT5 2789 aa5.23□□□□□ -1.57
GTF2A1-203ENST00000553612 Q6ZSA8 131 aa5.2□□□□□ -1.58
GTF2A1-203ENST00000553612 SPRR1AP35321 89 aa5.2□□□□□ -1.58
GTF2A1-203ENST00000553612 FASNP49327 2511 aaKnown RBP5.19□□□□□ -1.58
GTF2A1-203ENST00000553612 MUC3AQ02505 3323 aa5.17□□□□□ -1.58
GTF2A1-203ENST00000553612 KRTAP10-3P60369 221 aa5.17□□□□□ -1.58
GTF2A1-203ENST00000553612 HELZ2Q9BYK8 2649 aaKnown RBP5.16□□□□□ -1.58
GTF2A1-203ENST00000553612 UBR5O95071 2799 aaPredicted RBP5.16□□□□□ -1.58
GTF2A1-203ENST00000553612 CRYBG3Q68DQ2 2970 aa5.15□□□□□ -1.58
GTF2A1-203ENST00000553612 NOTCH1P46531 2555 aa5.14□□□□□ -1.59
GTF2A1-203ENST00000553612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.14□□□□□ -1.59
GTF2A1-203ENST00000553612 APCP25054 2843 aa5.13□□□□□ -1.59
GTF2A1-203ENST00000553612 H3BNG1 76 aa5.13□□□□□ -1.59
GTF2A1-203ENST00000553612 UTP20O75691 2785 aaKnown RBP5.12□□□□□ -1.59
GTF2A1-203ENST00000553612 J3QKU1 62 aa5.11□□□□□ -1.59
GTF2A1-203ENST00000553612 PLAC4Q8WY50 150 aa5.11□□□□□ -1.59
GTF2A1-203ENST00000553612 NBEAL1Q6ZS30 2694 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms