RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
CHMP1A-210ENST00000551981 MUSTN1Q8IVN3 82 aa7.24□□□□□ -1.25
CHMP1A-210ENST00000551981 SYNE2Q8WXH0 6885 aaKnown RBP7.23□□□□□ -1.25
CHMP1A-210ENST00000551981 COLCA2A8K830 154 aa7.22□□□□□ -1.25
CHMP1A-210ENST00000551981 LST1O00453 97 aa7.22□□□□□ -1.25
CHMP1A-210ENST00000551981 OCIAD2Q56VL3 154 aa7.22□□□□□ -1.25
CHMP1A-210ENST00000551981 Q6ZQY7 126 aa7.22□□□□□ -1.25
CHMP1A-210ENST00000551981 MACF1Q9UPN3 7388 aaKnown RBP7.22□□□□□ -1.25
CHMP1A-210ENST00000551981 LINC00575Q6W349 94 aa7.21□□□□□ -1.26
CHMP1A-210ENST00000551981 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
CHMP1A-210ENST00000551981 C20orf166-AS1Q96NR2 134 aa7.2□□□□□ -1.26
CHMP1A-210ENST00000551981 MT2AP02795 61 aa7.19□□□□□ -1.26
CHMP1A-210ENST00000551981 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
CHMP1A-210ENST00000551981 A8MUU9 505 aa7.18□□□□□ -1.26
CHMP1A-210ENST00000551981 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
CHMP1A-210ENST00000551981 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BKO60814 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BJP06899 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BOP23527 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BBP33778 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BDP58876 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 KRTDAPP60985 99 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BCP62807 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST2H2BEQ16778 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 ANKRD39Q53RE8 183 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BHQ93079 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BNQ99877 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 HIST1H2BMQ99879 126 aa7.17□□□□□ -1.26
CHMP1A-210ENST00000551981 FAM236DA0A1B0GTK5 79 aa7.16□□□□□ -1.26
CHMP1A-210ENST00000551981 FAM236CP0DP71 79 aa7.16□□□□□ -1.26
CHMP1A-210ENST00000551981 PPDPFLQ8WWR9 84 aa7.16□□□□□ -1.26
CHMP1A-210ENST00000551981 SNHG12Q9BXW3 62 aa7.16□□□□□ -1.26
CHMP1A-210ENST00000551981 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
CHMP1A-210ENST00000551981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.15□□□□□ -1.26
CHMP1A-210ENST00000551981 LCE2BO14633 110 aa7.14□□□□□ -1.27
CHMP1A-210ENST00000551981 H3BUT2 72 aa7.12□□□□□ -1.27
CHMP1A-210ENST00000551981 MT1FP04733 61 aa7.12□□□□□ -1.27
CHMP1A-210ENST00000551981 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
CHMP1A-210ENST00000551981 ATOH7Q8N100 152 aa7.11□□□□□ -1.27
CHMP1A-210ENST00000551981 KRTAP9-3Q9BYQ3 159 aa7.1□□□□□ -1.27
CHMP1A-210ENST00000551981 LINC00846Q9NV44 126 aa7.1□□□□□ -1.27
CHMP1A-210ENST00000551981 RBM12B-AS1Q9P1G2 102 aa7.09□□□□□ -1.27
CHMP1A-210ENST00000551981 BVES-AS1Q5T3Y7 98 aa7.08□□□□□ -1.28
CHMP1A-210ENST00000551981 DSCR10P59022 87 aa7.07□□□□□ -1.28
CHMP1A-210ENST00000551981 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
CHMP1A-210ENST00000551981 SNRPEP62304 92 aaKnown RBP7.06□□□□□ -1.28
CHMP1A-210ENST00000551981 C12orf57Q99622 126 aa7.05□□□□□ -1.28
CHMP1A-210ENST00000551981 A0A087WSZ3 146 aa7.04□□□□□ -1.28
CHMP1A-210ENST00000551981 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
CHMP1A-210ENST00000551981 SNCGO76070 127 aa7.03□□□□□ -1.28
CHMP1A-210ENST00000551981 SIGMAR1Q99720 223 aa7.03□□□□□ -1.28
CHMP1A-210ENST00000551981 KRTAP16-1A8MUX0 517 aa7.02□□□□□ -1.29
CHMP1A-210ENST00000551981 MPLKIPQ8TAP9 179 aa7.02□□□□□ -1.29
CHMP1A-210ENST00000551981 HRES1P13985 223 aa7.01□□□□□ -1.29
CHMP1A-210ENST00000551981 LINC00313P59037 77 aa7.01□□□□□ -1.29
CHMP1A-210ENST00000551981 NDUFV3P56181 108 aaKnown RBP7□□□□□ -1.29
CHMP1A-210ENST00000551981 HSBP1L1C9JCN9 74 aa6.98□□□□□ -1.29
CHMP1A-210ENST00000551981 MTURNQ8N3F0 131 aa6.98□□□□□ -1.29
CHMP1A-210ENST00000551981 KRTAP19-6Q3LI70 58 aa6.97□□□□□ -1.29
CHMP1A-210ENST00000551981 H3BMG7 143 aa6.96□□□□□ -1.3
CHMP1A-210ENST00000551981 GHRHP01286 108 aa6.95□□□□□ -1.3
CHMP1A-210ENST00000551981 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
CHMP1A-210ENST00000551981 NOTCH2NLQ7Z3S9 236 aa6.95□□□□□ -1.3
CHMP1A-210ENST00000551981 HIST1H4GQ99525 98 aa6.95□□□□□ -1.3
CHMP1A-210ENST00000551981 H0YGX0 51 aa6.94□□□□□ -1.3
CHMP1A-210ENST00000551981 FABP2P12104 132 aa6.92□□□□□ -1.3
CHMP1A-210ENST00000551981 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
CHMP1A-210ENST00000551981 RAB37Q96AX2 223 aa6.9□□□□□ -1.3
CHMP1A-210ENST00000551981 FAM218AQ96MZ4 157 aa6.89□□□□□ -1.31
CHMP1A-210ENST00000551981 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
CHMP1A-210ENST00000551981 TRBV7-4A0A0J9YYF1 115 aa6.88□□□□□ -1.31
CHMP1A-210ENST00000551981 A0A1B0GX51 115 aa6.87□□□□□ -1.31
CHMP1A-210ENST00000551981 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
CHMP1A-210ENST00000551981 A8MWP4 228 aa6.86□□□□□ -1.31
CHMP1A-210ENST00000551981 ANKRD29Q8N6D5 301 aa6.86□□□□□ -1.31
CHMP1A-210ENST00000551981 S100A2P29034 98 aa6.85□□□□□ -1.31
CHMP1A-210ENST00000551981 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
CHMP1A-210ENST00000551981 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
CHMP1A-210ENST00000551981 A0A0B4J2C4 111 aa6.83□□□□□ -1.32
CHMP1A-210ENST00000551981 HIST1H2BLQ99880 126 aa6.83□□□□□ -1.32
CHMP1A-210ENST00000551981 NEBP20929 6669 aa6.82□□□□□ -1.32
CHMP1A-210ENST00000551981 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
CHMP1A-210ENST00000551981 COX8AP10176 69 aa6.82□□□□□ -1.32
CHMP1A-210ENST00000551981 SPINK7P58062 85 aa6.82□□□□□ -1.32
CHMP1A-210ENST00000551981 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
CHMP1A-210ENST00000551981 HIST3H2BBQ8N257 126 aa6.81□□□□□ -1.32
CHMP1A-210ENST00000551981 A0A1B0GV72 72 aa6.8□□□□□ -1.32
CHMP1A-210ENST00000551981 DLEU1O43261 78 aa6.8□□□□□ -1.32
CHMP1A-210ENST00000551981 TRACP01848 142 aa6.8□□□□□ -1.32
CHMP1A-210ENST00000551981 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
CHMP1A-210ENST00000551981 H3BQ85 93 aa6.79□□□□□ -1.32
CHMP1A-210ENST00000551981 DNAL4O96015 105 aa6.78□□□□□ -1.32
CHMP1A-210ENST00000551981 CCKP06307 115 aa6.78□□□□□ -1.32
CHMP1A-210ENST00000551981 Q8N9P0 234 aaPredicted RBP6.78□□□□□ -1.32
CHMP1A-210ENST00000551981 ORMDL1Q9P0S3 153 aa6.77□□□□□ -1.33
CHMP1A-210ENST00000551981 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
CHMP1A-210ENST00000551981 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
CHMP1A-210ENST00000551981 HIGD1BQ9P298 99 aa6.75□□□□□ -1.33
CHMP1A-210ENST00000551981 TMEM256-PLSCR3K7ERE1 68 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms