RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 A0A1B0GW54 56 aa4.12□□□□□ -1.75
COX6A1-202ENST00000549525 ZNF73O43830 326 aaPredicted RBP4.12□□□□□ -1.75
COX6A1-202ENST00000549525 COX7BP24311 80 aa4.12□□□□□ -1.75
COX6A1-202ENST00000549525 FUSP35637 526 aaKnown RBP eCLIP4.12□□□□□ -1.75
COX6A1-202ENST00000549525 FAM218AQ96MZ4 157 aa4.12□□□□□ -1.75
COX6A1-202ENST00000549525 RYR2Q92736 4967 aa4.11□□□□□ -1.75
COX6A1-202ENST00000549525 UBE2BP63146 152 aa4.11□□□□□ -1.75
COX6A1-202ENST00000549525 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
COX6A1-202ENST00000549525 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
COX6A1-202ENST00000549525 MRPL55Q7Z7F7 128 aaKnown RBP4.11□□□□□ -1.75
COX6A1-202ENST00000549525 CIRBP-AS1Q8TBR5 109 aa4.11□□□□□ -1.75
COX6A1-202ENST00000549525 KCNQ1DNQ9H478 68 aa4.11□□□□□ -1.75
COX6A1-202ENST00000549525 DHRS4-AS1Q9P1J3 65 aa4.11□□□□□ -1.75
COX6A1-202ENST00000549525 EPM2AB3EWF7 344 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 NCR3O14931 201 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 CCKP06307 115 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 CHTF8P0CG12 524 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 ELOF1P60002 83 aaKnown RBP4.1□□□□□ -1.75
COX6A1-202ENST00000549525 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
COX6A1-202ENST00000549525 ATP5EP2Q5VTU8 51 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 SCXQ7RTU7 201 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 FAM19A5Q7Z5A7 132 aaPredicted RBP4.1□□□□□ -1.75
COX6A1-202ENST00000549525 DSCR8Q96T75 97 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 C22orf24Q9Y442 160 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 PKHD1P08F94 4074 aa4.1□□□□□ -1.75
COX6A1-202ENST00000549525 LOC110117498A0A087WWA1 95 aa4.09□□□□□ -1.75
COX6A1-202ENST00000549525 TRBV7-7A0A0K0K1E9 115 aa4.09□□□□□ -1.75
COX6A1-202ENST00000549525 TRBV10-3A0A0K0K1G6 114 aa4.09□□□□□ -1.75
COX6A1-202ENST00000549525 XGP55808 180 aa4.09□□□□□ -1.75
COX6A1-202ENST00000549525 A0A1W2PNN7 141 aa4.08□□□□□ -1.76
COX6A1-202ENST00000549525 LAMTOR3Q9UHA4 124 aa4.08□□□□□ -1.76
COX6A1-202ENST00000549525 RYR3Q15413 4870 aa4.07□□□□□ -1.76
COX6A1-202ENST00000549525 FAM168BA1KXE4 195 aa4.07□□□□□ -1.76
COX6A1-202ENST00000549525 PANO1I0J062 215 aa4.07□□□□□ -1.76
COX6A1-202ENST00000549525 MT-ATP8P03928 68 aa4.07□□□□□ -1.76
COX6A1-202ENST00000549525 UBL5Q9BZL1 73 aa4.07□□□□□ -1.76
COX6A1-202ENST00000549525 IGLV1-50A0A075B6I6 118 aa4.06□□□□□ -1.76
COX6A1-202ENST00000549525 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
COX6A1-202ENST00000549525 PHF5AQ7RTV0 110 aaKnown RBP4.06□□□□□ -1.76
COX6A1-202ENST00000549525 ETDCA0A1B0GVM5 59 aa4.05□□□□□ -1.76
COX6A1-202ENST00000549525 SPRR1AP35321 89 aa4.05□□□□□ -1.76
COX6A1-202ENST00000549525 RPL37AP61513 92 aaKnown RBP4.05□□□□□ -1.76
COX6A1-202ENST00000549525 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
COX6A1-202ENST00000549525 Q6ZQY7 126 aa4.05□□□□□ -1.76
COX6A1-202ENST00000549525 C14orf132Q9NPU4 83 aa4.05□□□□□ -1.76
COX6A1-202ENST00000549525 DNAH11Q96DT5 4516 aa4.05□□□□□ -1.76
COX6A1-202ENST00000549525 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
COX6A1-202ENST00000549525 BCE1O60756 84 aa4.04□□□□□ -1.76
COX6A1-202ENST00000549525 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
COX6A1-202ENST00000549525 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
COX6A1-202ENST00000549525 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
COX6A1-202ENST00000549525 Q6JHZ5 121 aa4.04□□□□□ -1.76
COX6A1-202ENST00000549525 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
COX6A1-202ENST00000549525 H0Y9J4 135 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 SMR3BP02814 79 aaPredicted RBP4.03□□□□□ -1.76
COX6A1-202ENST00000549525 UBE2AP49459 152 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 Q6ZQT0 140 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 Q6ZRX8 168 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 KRTAP7-1Q8IUC3 87 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 Q8NDZ9 215 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 ANAPC13Q9BS18 74 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
COX6A1-202ENST00000549525 TRBV7-4A0A0J9YYF1 115 aa4.02□□□□□ -1.77
COX6A1-202ENST00000549525 CXCL6P80162 114 aa4.02□□□□□ -1.77
COX6A1-202ENST00000549525 ATOX1O00244 68 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 ZNF861PO60384 105 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 IGLV7-43P04211 117 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 HAMPP81172 84 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 Q5VSD8 79 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 FAM19A1Q7Z5A9 133 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 SMIM20Q8N5G0 67 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 LINC00846Q9NV44 126 aa4.01□□□□□ -1.77
COX6A1-202ENST00000549525 IGLV5-48A0A075B6I7 105 aa4□□□□□ -1.77
COX6A1-202ENST00000549525 KRTAP4-16G5E9R7 235 aaPredicted RBP4□□□□□ -1.77
COX6A1-202ENST00000549525 ZNF706Q9Y5V0 76 aaPredicted RBP4□□□□□ -1.77
COX6A1-202ENST00000549525 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
COX6A1-202ENST00000549525 DNAH5Q8TE73 4624 aa3.99□□□□□ -1.77
COX6A1-202ENST00000549525 A0A087X002 238 aa3.98□□□□□ -1.77
COX6A1-202ENST00000549525 F8WEM9 126 aa3.98□□□□□ -1.77
COX6A1-202ENST00000549525 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
COX6A1-202ENST00000549525 NREPQ16612 68 aa3.97□□□□□ -1.77
COX6A1-202ENST00000549525 Q8N377 158 aa3.97□□□□□ -1.77
COX6A1-202ENST00000549525 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
COX6A1-202ENST00000549525 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.77
COX6A1-202ENST00000549525 FAM236AA0A1B0GUQ0 79 aa3.96□□□□□ -1.78
COX6A1-202ENST00000549525 FAM236BA0A1B0GV22 79 aa3.96□□□□□ -1.78
COX6A1-202ENST00000549525 UQCRQO14949 82 aa3.96□□□□□ -1.78
COX6A1-202ENST00000549525 HIST1H4AP62805 103 aaKnown RBP3.96□□□□□ -1.78
COX6A1-202ENST00000549525 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.78
COX6A1-202ENST00000549525 SRRM2Q9UQ35 2752 aaKnown RBP3.96□□□□□ -1.78
COX6A1-202ENST00000549525 DYNC1H1Q14204 4646 aaKnown RBP3.95□□□□□ -1.78
COX6A1-202ENST00000549525 PRLHP81277 87 aa3.95□□□□□ -1.78
COX6A1-202ENST00000549525 Q6ZVQ6 151 aa3.95□□□□□ -1.78
COX6A1-202ENST00000549525 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
COX6A1-202ENST00000549525 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
COX6A1-202ENST00000549525 DEFB105AQ8NG35 78 aa3.95□□□□□ -1.78
COX6A1-202ENST00000549525 SPRR4Q96PI1 79 aa3.95□□□□□ -1.78
COX6A1-202ENST00000549525 Q9BRP9 147 aa3.95□□□□□ -1.78
COX6A1-202ENST00000549525 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 288.5 ms