RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 FBN3Q75N90 2809 aa11.53□□□□□ -0.56
PRPF40B-208ENST00000548436 SRRM2Q9UQ35 2752 aaKnown RBP11.52□□□□□ -0.57
PRPF40B-208ENST00000548436 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
PRPF40B-208ENST00000548436 H0Y9J4 135 aa11.51□□□□□ -0.57
PRPF40B-208ENST00000548436 LINC00474Q9P2X8 69 aa11.51□□□□□ -0.57
PRPF40B-208ENST00000548436 IGLV8-61A0A075B6I0 122 aa11.5□□□□□ -0.57
PRPF40B-208ENST00000548436 UBE2AP49459 152 aa11.48□□□□□ -0.57
PRPF40B-208ENST00000548436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-208ENST00000548436 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
PRPF40B-208ENST00000548436 DPH3Q96FX2 82 aa11.47□□□□□ -0.57
PRPF40B-208ENST00000548436 A0A087WTM6 91 aa11.46□□□□□ -0.57
PRPF40B-208ENST00000548436 DSCR10P59022 87 aa11.46□□□□□ -0.57
PRPF40B-208ENST00000548436 SPRR1BP22528 89 aa11.45□□□□□ -0.58
PRPF40B-208ENST00000548436 KLKP1Q107X0 134 aa11.45□□□□□ -0.58
PRPF40B-208ENST00000548436 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
PRPF40B-208ENST00000548436 SNURFQ9Y675 71 aa11.45□□□□□ -0.58
PRPF40B-208ENST00000548436 HECTD4Q9Y4D8 3996 aa11.45□□□□□ -0.58
PRPF40B-208ENST00000548436 OCR1Q9BZK8 76 aa11.44□□□□□ -0.58
PRPF40B-208ENST00000548436 H7BZZ5 65 aa11.42□□□□□ -0.58
PRPF40B-208ENST00000548436 KRTAP13-1Q8IUC0 172 aa11.42□□□□□ -0.58
PRPF40B-208ENST00000548436 K7EQZ3 153 aa11.41□□□□□ -0.58
PRPF40B-208ENST00000548436 Q6ZR54 194 aa11.41□□□□□ -0.58
PRPF40B-208ENST00000548436 A0A087WSZ3 146 aa11.4□□□□□ -0.58
PRPF40B-208ENST00000548436 DNAH2Q9P225 4427 aa11.4□□□□□ -0.58
PRPF40B-208ENST00000548436 J3KT08 172 aa11.4□□□□□ -0.58
PRPF40B-208ENST00000548436 RPS28P62857 69 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-208ENST00000548436 DEFB116Q30KQ4 102 aa11.38□□□□□ -0.59
PRPF40B-208ENST00000548436 RTL8CO15255 209 aa11.37□□□□□ -0.59
PRPF40B-208ENST00000548436 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
PRPF40B-208ENST00000548436 DNAH17Q9UFH2 4485 aa11.34□□□□□ -0.59
PRPF40B-208ENST00000548436 TGP01266 2768 aa11.33□□□□□ -0.6
PRPF40B-208ENST00000548436 FAM236DA0A1B0GTK5 79 aa11.33□□□□□ -0.6
PRPF40B-208ENST00000548436 FAM236CP0DP71 79 aa11.33□□□□□ -0.6
PRPF40B-208ENST00000548436 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.6
PRPF40B-208ENST00000548436 OXTP01178 125 aa11.32□□□□□ -0.6
PRPF40B-208ENST00000548436 A0A0U1RQV1 116 aa11.29□□□□□ -0.6
PRPF40B-208ENST00000548436 HCG22E2RYF7 251 aa11.28□□□□□ -0.6
PRPF40B-208ENST00000548436 NDUFC1O43677 76 aa11.28□□□□□ -0.6
PRPF40B-208ENST00000548436 RPL37AP61513 92 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-208ENST00000548436 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
PRPF40B-208ENST00000548436 PLAC8Q9NZF1 115 aa11.27□□□□□ -0.61
PRPF40B-208ENST00000548436 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.61
PRPF40B-208ENST00000548436 DNAH8Q96JB1 4490 aa11.26□□□□□ -0.61
PRPF40B-208ENST00000548436 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
PRPF40B-208ENST00000548436 IGLV5-52A0A0A0MRZ9 124 aa11.25□□□□□ -0.61
PRPF40B-208ENST00000548436 LINC00472Q9H8W2 130 aa11.24□□□□□ -0.61
PRPF40B-208ENST00000548436 LCE6AA0A183 80 aa11.24□□□□□ -0.61
PRPF40B-208ENST00000548436 IGLV9-49A0A0B4J1Y8 123 aa11.23□□□□□ -0.61
PRPF40B-208ENST00000548436 LY6G6CO95867 125 aa11.23□□□□□ -0.61
PRPF40B-208ENST00000548436 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
PRPF40B-208ENST00000548436 WWC2-AS2Q96NR7 200 aa11.22□□□□□ -0.61
PRPF40B-208ENST00000548436 WFDC13Q8IUB5 93 aa11.21□□□□□ -0.61
PRPF40B-208ENST00000548436 DNAH6Q9C0G6 4158 aa11.18□□□□□ -0.62
PRPF40B-208ENST00000548436 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
PRPF40B-208ENST00000548436 SERP1Q9Y6X1 66 aa11.18□□□□□ -0.62
PRPF40B-208ENST00000548436 A8MWP4 228 aa11.17□□□□□ -0.62
PRPF40B-208ENST00000548436 ZNF861PO60384 105 aa11.17□□□□□ -0.62
PRPF40B-208ENST00000548436 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
PRPF40B-208ENST00000548436 ZNF706Q9Y5V0 76 aaPredicted RBP11.16□□□□□ -0.62
PRPF40B-208ENST00000548436 ANAPC11Q9NYG5 84 aa11.16□□□□□ -0.62
PRPF40B-208ENST00000548436 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
PRPF40B-208ENST00000548436 C5orf47Q569G3 176 aa11.13□□□□□ -0.63
PRPF40B-208ENST00000548436 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
PRPF40B-208ENST00000548436 ZCCHC13Q8WW36 166 aaKnown RBP11.12□□□□□ -0.63
PRPF40B-208ENST00000548436 Q96NJ1 140 aa11.12□□□□□ -0.63
PRPF40B-208ENST00000548436 MOBPQ13875 183 aa11.12□□□□□ -0.63
PRPF40B-208ENST00000548436 CASC2Q6XLA1 102 aa11.11□□□□□ -0.63
PRPF40B-208ENST00000548436 KRTAP10-2P60368 255 aa11.1□□□□□ -0.63
PRPF40B-208ENST00000548436 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
PRPF40B-208ENST00000548436 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.64
PRPF40B-208ENST00000548436 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
PRPF40B-208ENST00000548436 Q5XG85 94 aa11.07□□□□□ -0.64
PRPF40B-208ENST00000548436 ALMS1Q8TCU4 4167 aa11.07□□□□□ -0.64
PRPF40B-208ENST00000548436 MMP24-AS1A0A0U1RRL7 71 aa11.05□□□□□ -0.64
PRPF40B-208ENST00000548436 CIRBP-AS1Q8TBR5 109 aa11.04□□□□□ -0.64
PRPF40B-208ENST00000548436 NDUFB1O75438 58 aa11.02□□□□□ -0.64
PRPF40B-208ENST00000548436 C4orf26Q17RF5 130 aa11.01□□□□□ -0.65
PRPF40B-208ENST00000548436 PKD1P98161 4303 aa11.01□□□□□ -0.65
PRPF40B-208ENST00000548436 HYDINQ4G0P3 5121 aa11□□□□□ -0.65
PRPF40B-208ENST00000548436 MP68P56378 58 aa10.99□□□□□ -0.65
PRPF40B-208ENST00000548436 hDV103S1A0JD37 113 aa10.98□□□□□ -0.65
PRPF40B-208ENST00000548436 LINC00208Q96KT6 92 aa10.97□□□□□ -0.65
PRPF40B-208ENST00000548436 H0Y9P7 68 aa10.97□□□□□ -0.65
PRPF40B-208ENST00000548436 FAT2Q9NYQ8 4349 aa10.96□□□□□ -0.65
PRPF40B-208ENST00000548436 SMIM26A0A096LP01 95 aa10.96□□□□□ -0.65
PRPF40B-208ENST00000548436 FP248Q71RG6 208 aaPredicted RBP10.96□□□□□ -0.65
PRPF40B-208ENST00000548436 ASB16-AS1Q495Z4 193 aa10.96□□□□□ -0.66
PRPF40B-208ENST00000548436 SVIPQ8NHG7 77 aa10.96□□□□□ -0.66
PRPF40B-208ENST00000548436 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
PRPF40B-208ENST00000548436 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
PRPF40B-208ENST00000548436 TRAV22A0A0B4J277 110 aa10.94□□□□□ -0.66
PRPF40B-208ENST00000548436 Q6ZSA8 131 aa10.94□□□□□ -0.66
PRPF40B-208ENST00000548436 C8orf17Q9NRJ1 99 aa10.94□□□□□ -0.66
PRPF40B-208ENST00000548436 A0A1B0GVX0 72 aa10.93□□□□□ -0.66
PRPF40B-208ENST00000548436 IGHV6-1A0A0B4J1U7 121 aa10.92□□□□□ -0.66
PRPF40B-208ENST00000548436 H3BPC8 53 aa10.9□□□□□ -0.66
PRPF40B-208ENST00000548436 CDK2AP2O75956 126 aa10.88□□□□□ -0.67
PRPF40B-208ENST00000548436 PRR4Q16378 134 aa10.88□□□□□ -0.67
PRPF40B-208ENST00000548436 LRP1BQ9NZR2 4599 aa10.88□□□□□ -0.67
PRPF40B-208ENST00000548436 A0A087X002 238 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms