RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MGST2Q99735 147 aa1.56□□□□□ -2.16
SCAF11-210ENST00000547654 SNHG12Q9BXW3 62 aa1.56□□□□□ -2.16
SCAF11-210ENST00000547654 R4GMQ9 66 aa1.56□□□□□ -2.16
SCAF11-210ENST00000547654 MACF1Q9UPN3 7388 aaKnown RBP1.55□□□□□ -2.16
SCAF11-210ENST00000547654 SPAG11BQ08648 103 aa1.55□□□□□ -2.16
SCAF11-210ENST00000547654 Q5VSD8 79 aa1.55□□□□□ -2.16
SCAF11-210ENST00000547654 SPAG11AQ6PDA7 123 aa1.55□□□□□ -2.16
SCAF11-210ENST00000547654 PROK2Q9HC23 129 aa1.55□□□□□ -2.16
SCAF11-210ENST00000547654 DYNLRB1Q9NP97 96 aa1.55□□□□□ -2.16
SCAF11-210ENST00000547654 LENEPQ9Y5L5 61 aa1.55□□□□□ -2.16
SCAF11-210ENST00000547654 DEFB108BQ8NET1 73 aa1.54□□□□□ -2.16
SCAF11-210ENST00000547654 LCN9Q8WX39 176 aa1.54□□□□□ -2.16
SCAF11-210ENST00000547654 PLAC4Q8WY50 150 aa1.54□□□□□ -2.16
SCAF11-210ENST00000547654 MANBALQ9NQG1 85 aa1.54□□□□□ -2.16
SCAF11-210ENST00000547654 UQCR10Q9UDW1 63 aa1.54□□□□□ -2.16
SCAF11-210ENST00000547654 A0A087WTM6 91 aa1.53□□□□□ -2.16
SCAF11-210ENST00000547654 LOC285095A0A1B0GVY8 99 aa1.53□□□□□ -2.16
SCAF11-210ENST00000547654 CRYM-AS1A6NIL9 109 aa1.53□□□□□ -2.16
SCAF11-210ENST00000547654 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
SCAF11-210ENST00000547654 FXYD6P3P58550 94 aa1.53□□□□□ -2.16
SCAF11-210ENST00000547654 VAMP8Q9BV40 100 aa1.53□□□□□ -2.16
SCAF11-210ENST00000547654 hADV29S1A0JD25 119 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 F2Z2F3 143 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 LYNX1G3V0Z9 82 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 CHKB-CPT1BH3BT56 60 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 MT-ATP8P03928 68 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 SPINT3P49223 89 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 SEC11AP67812 179 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 DEFB112Q30KQ8 113 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 BAGE3Q86Y29 109 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 DEFB106AQ8N104 65 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 WFDC6Q9BQY6 131 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 V9GYH0 126 aa1.52□□□□□ -2.17
SCAF11-210ENST00000547654 ACYP2P14621 99 aa1.51□□□□□ -2.17
SCAF11-210ENST00000547654 TMEM170BQ5T4T1 132 aa1.51□□□□□ -2.17
SCAF11-210ENST00000547654 FAM213BQ8TBF2 198 aa1.51□□□□□ -2.17
SCAF11-210ENST00000547654 NDUFA4L2Q9NRX3 87 aa1.51□□□□□ -2.17
SCAF11-210ENST00000547654 V9GYS6 101 aa1.51□□□□□ -2.17
SCAF11-210ENST00000547654 MUC12Q9UKN1 5478 aa1.51□□□□□ -2.17
SCAF11-210ENST00000547654 TRGV1A0A0A0MS02 117 aa1.5□□□□□ -2.17
SCAF11-210ENST00000547654 Q0VG73 95 aa1.5□□□□□ -2.17
SCAF11-210ENST00000547654 FAM167A-AS1Q96KT0 104 aa1.5□□□□□ -2.17
SCAF11-210ENST00000547654 Q96NJ1 140 aa1.5□□□□□ -2.17
SCAF11-210ENST00000547654 PMCHL2Q9BQD1 86 aa1.5□□□□□ -2.17
SCAF11-210ENST00000547654 H0YGG7 62 aa1.49□□□□□ -2.17
SCAF11-210ENST00000547654 NDUFC1O43677 76 aa1.49□□□□□ -2.17
SCAF11-210ENST00000547654 PRO1854Q9UHT4 67 aa1.49□□□□□ -2.17
SCAF11-210ENST00000547654 CTXND1A0A1B0GTU2 59 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 PVALEFA0A1B0GWK0 134 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 M0R135 149 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 HMGN4O00479 90 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 COX6CP09669 75 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 TRAPPC2P0DI81 140 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 TRAPPC2BP0DI82 140 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 CCL18P55774 89 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 Q8N6K4 173 aa1.48□□□□□ -2.17
SCAF11-210ENST00000547654 TRAV1-2A0A0B4J238 106 aa1.47□□□□□ -2.17
SCAF11-210ENST00000547654 TRAV22A0A0B4J277 110 aa1.47□□□□□ -2.17
SCAF11-210ENST00000547654 F8VRH5 84 aa1.47□□□□□ -2.17
SCAF11-210ENST00000547654 ATOX1O00244 68 aa1.47□□□□□ -2.17
SCAF11-210ENST00000547654 RPL37P61927 97 aaKnown RBP1.47□□□□□ -2.17
SCAF11-210ENST00000547654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.47□□□□□ -2.17
SCAF11-210ENST00000547654 VMO1Q7Z5L0 202 aa1.47□□□□□ -2.17
SCAF11-210ENST00000547654 SNRPFP62306 86 aaKnown RBP1.46□□□□□ -2.18
SCAF11-210ENST00000547654 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
SCAF11-210ENST00000547654 MUC17Q685J3 4493 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 IGLC7A0M8Q6 106 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 TMEM14DPA8MWL7 114 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 SFT2D2O95562 160 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 APOC3P02656 99 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 FAUP35544 74 aaKnown RBP1.45□□□□□ -2.18
SCAF11-210ENST00000547654 UBE2D3P61077 147 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 UBE2D2P62837 147 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 Q5VV11 94 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 BAGE2Q86Y30 109 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 SMIM4Q8WVI0 70 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 AMELXQ99217 191 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 CDC42SE2Q9NRR3 84 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 KMT2DO14686 5537 aa1.45□□□□□ -2.18
SCAF11-210ENST00000547654 UQCR11O14957 56 aa1.44□□□□□ -2.18
SCAF11-210ENST00000547654 MT1HL1P0DM35 61 aa1.44□□□□□ -2.18
SCAF11-210ENST00000547654 IGLC1P0CG04 106 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 GCHFRP30047 84 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 Q6ZRX8 168 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 SERP2Q8N6R1 65 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 TRGV9Q99603 122 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 NPVFQ9HCQ7 196 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 NXT2Q9NPJ8 142 aaKnown RBP1.43□□□□□ -2.18
SCAF11-210ENST00000547654 LINC01558Q9Y6Z2 57 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 ARL2-SNX15V9GYD0 113 aa1.43□□□□□ -2.18
SCAF11-210ENST00000547654 UQCRHLA0A096LP55 91 aa1.42□□□□□ -2.18
SCAF11-210ENST00000547654 GVQW2A0A096LPI5 108 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-210ENST00000547654 GYPAP02724 150 aa1.42□□□□□ -2.18
SCAF11-210ENST00000547654 SMR3BP02814 79 aaPredicted RBP1.42□□□□□ -2.18
SCAF11-210ENST00000547654 ZNF137PP52743 207 aa1.42□□□□□ -2.18
SCAF11-210ENST00000547654 SPINK9Q5DT21 86 aa1.42□□□□□ -2.18
SCAF11-210ENST00000547654 CFAP126Q5VTH2 177 aa1.42□□□□□ -2.18
SCAF11-210ENST00000547654 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms