RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CELSR2Q9HCU4 2923 aa4.11□□□□□ -1.75
SNHG1-225ENST00000545920 KRTAP10-11P60412 298 aa4.11□□□□□ -1.75
SNHG1-225ENST00000545920 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
SNHG1-225ENST00000545920 LINC00336Q6ZUF6 198 aa4.11□□□□□ -1.75
SNHG1-225ENST00000545920 HIGD2AQ9BW72 106 aa4.11□□□□□ -1.75
SNHG1-225ENST00000545920 RPL37AP61513 92 aaKnown RBP4.1□□□□□ -1.75
SNHG1-225ENST00000545920 MAP1AP78559 2803 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-225ENST00000545920 PSCAO43653 123 aa4.09□□□□□ -1.75
SNHG1-225ENST00000545920 RETNQ9HD89 108 aa4.09□□□□□ -1.75
SNHG1-225ENST00000545920 ZFYVE26Q68DK2 2539 aa4.09□□□□□ -1.76
SNHG1-225ENST00000545920 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-225ENST00000545920 K7EQZ3 153 aa4.08□□□□□ -1.76
SNHG1-225ENST00000545920 ANK3Q12955 4377 aaKnown RBP4.08□□□□□ -1.76
SNHG1-225ENST00000545920 C1orf195Q5TG92 126 aa4.08□□□□□ -1.76
SNHG1-225ENST00000545920 IGFL1Q6UW32 110 aa4.08□□□□□ -1.76
SNHG1-225ENST00000545920 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
SNHG1-225ENST00000545920 ST20-AS1Q8NBB2 130 aa4.08□□□□□ -1.76
SNHG1-225ENST00000545920 LINC00474Q9P2X8 69 aa4.08□□□□□ -1.76
SNHG1-225ENST00000545920 MTORP42345 2549 aa4.07□□□□□ -1.76
SNHG1-225ENST00000545920 PRR15Q8IV56 129 aa4.07□□□□□ -1.76
SNHG1-225ENST00000545920 CRYBG3Q68DQ2 2970 aa4.07□□□□□ -1.76
SNHG1-225ENST00000545920 PDZD2O15018 2839 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 TRAV22A0A0B4J277 110 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 FAM168BA1KXE4 195 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 A8MWP4 228 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 KRTAP29-1A8MX34 341 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-225ENST00000545920 UBE2AP49459 152 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 NOTCH2Q04721 2471 aa4.06□□□□□ -1.76
SNHG1-225ENST00000545920 ACANP16112 2415 aa4.05□□□□□ -1.76
SNHG1-225ENST00000545920 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
SNHG1-225ENST00000545920 B9D2Q9BPU9 175 aa4.05□□□□□ -1.76
SNHG1-225ENST00000545920 SETD2Q9BYW2 2564 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-225ENST00000545920 A0A087WSZ3 146 aa4.04□□□□□ -1.76
SNHG1-225ENST00000545920 FAM229BQ4G0N7 80 aa4.04□□□□□ -1.76
SNHG1-225ENST00000545920 CASC2Q6XLA1 102 aa4.04□□□□□ -1.76
SNHG1-225ENST00000545920 LIMD2Q9BT23 127 aa4.04□□□□□ -1.76
SNHG1-225ENST00000545920 CENPEQ02224 2701 aa4.03□□□□□ -1.76
SNHG1-225ENST00000545920 LINC00472Q9H8W2 130 aa4.03□□□□□ -1.76
SNHG1-225ENST00000545920 GCN1Q92616 2671 aaKnown RBP4.03□□□□□ -1.76
SNHG1-225ENST00000545920 A0A096LNI7 61 aa4.02□□□□□ -1.77
SNHG1-225ENST00000545920 H0Y9P7 68 aa4.02□□□□□ -1.77
SNHG1-225ENST00000545920 MOBPQ13875 183 aa4.02□□□□□ -1.77
SNHG1-225ENST00000545920 CASC10Q5T4H9 136 aa4.02□□□□□ -1.77
SNHG1-225ENST00000545920 CSMD2Q7Z408 3487 aa4.01□□□□□ -1.77
SNHG1-225ENST00000545920 KRTAP24-1Q3LI83 254 aa4.01□□□□□ -1.77
SNHG1-225ENST00000545920 C9orf163Q8N9P6 203 aa4.01□□□□□ -1.77
SNHG1-225ENST00000545920 LINC00208Q96KT6 92 aa4.01□□□□□ -1.77
SNHG1-225ENST00000545920 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-225ENST00000545920 ZNF469Q96JG9 3925 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-225ENST00000545920 NBPF19A0A087WUL8 3843 aa4□□□□□ -1.77
SNHG1-225ENST00000545920 HECTD1Q9ULT8 2610 aa4□□□□□ -1.77
SNHG1-225ENST00000545920 A0A1W2PNN7 141 aa4□□□□□ -1.77
SNHG1-225ENST00000545920 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
SNHG1-225ENST00000545920 NF1P21359 2839 aa4□□□□□ -1.77
SNHG1-225ENST00000545920 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
SNHG1-225ENST00000545920 PRLHP81277 87 aa3.99□□□□□ -1.77
SNHG1-225ENST00000545920 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
SNHG1-225ENST00000545920 FBN3Q75N90 2809 aa3.99□□□□□ -1.77
SNHG1-225ENST00000545920 LINC00483Q53H64 154 aa3.98□□□□□ -1.77
SNHG1-225ENST00000545920 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
SNHG1-225ENST00000545920 UBE2DNLQ8IWF7 75 aa3.98□□□□□ -1.77
SNHG1-225ENST00000545920 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
SNHG1-225ENST00000545920 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
SNHG1-225ENST00000545920 Q6ZR54 194 aa3.97□□□□□ -1.77
SNHG1-225ENST00000545920 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
SNHG1-225ENST00000545920 K7EIL1 84 aa3.96□□□□□ -1.78
SNHG1-225ENST00000545920 APLNQ9ULZ1 77 aa3.96□□□□□ -1.78
SNHG1-225ENST00000545920 NBEAL2Q6ZNJ1 2754 aa3.96□□□□□ -1.78
SNHG1-225ENST00000545920 CDK2AP2O75956 126 aa3.95□□□□□ -1.78
SNHG1-225ENST00000545920 PHF5AQ7RTV0 110 aaKnown RBP3.95□□□□□ -1.78
SNHG1-225ENST00000545920 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-225ENST00000545920 NSD1Q96L73 2696 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-225ENST00000545920 LRCOL1A6NCL2 159 aa3.94□□□□□ -1.78
SNHG1-225ENST00000545920 NUPR2A6NF83 97 aa3.94□□□□□ -1.78
SNHG1-225ENST00000545920 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
SNHG1-225ENST00000545920 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
SNHG1-225ENST00000545920 C8orf17Q9NRJ1 99 aa3.94□□□□□ -1.78
SNHG1-225ENST00000545920 NBDYA0A0U1RRE5 68 aa3.93□□□□□ -1.78
SNHG1-225ENST00000545920 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
SNHG1-225ENST00000545920 CD164Q04900 197 aa3.93□□□□□ -1.78
SNHG1-225ENST00000545920 DEFB116Q30KQ4 102 aa3.93□□□□□ -1.78
SNHG1-225ENST00000545920 Q5VV11 94 aa3.93□□□□□ -1.78
SNHG1-225ENST00000545920 ATP11AUNQ6ZP68 121 aa3.93□□□□□ -1.78
SNHG1-225ENST00000545920 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
SNHG1-225ENST00000545920 NIPBLQ6KC79 2804 aaeCLIP3.93□□□□□ -1.781e-26■■□□□ 11.5
SNHG1-225ENST00000545920 IGLV9-49A0A0B4J1Y8 123 aa3.92□□□□□ -1.78
SNHG1-225ENST00000545920 A8MUN3 132 aa3.92□□□□□ -1.78
SNHG1-225ENST00000545920 COA5Q86WW8 74 aa3.92□□□□□ -1.78
SNHG1-225ENST00000545920 Q96NJ1 140 aa3.92□□□□□ -1.78
SNHG1-225ENST00000545920 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
SNHG1-225ENST00000545920 ITPR2Q14571 2701 aa3.92□□□□□ -1.78
SNHG1-225ENST00000545920 C8orf87E5RJ46 101 aa3.91□□□□□ -1.78
SNHG1-225ENST00000545920 PSPHP1O15172 72 aa3.91□□□□□ -1.78
SNHG1-225ENST00000545920 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
SNHG1-225ENST00000545920 HIVEP1P15822 2718 aa3.9□□□□□ -1.78
SNHG1-225ENST00000545920 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
SNHG1-225ENST00000545920 PRR4Q16378 134 aa3.9□□□□□ -1.79
SNHG1-225ENST00000545920 Q6ZRN7 208 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms