RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 FAM208AQ9UK61 1670 aaKnown RBP0.81□□□□□ -2.28
MRPL48-212ENST00000543374 TOGARAM1Q9Y4F4 1720 aa0.81□□□□□ -2.28
MRPL48-212ENST00000543374 ANK2Q01484 3957 aa0.81□□□□□ -2.28
MRPL48-212ENST00000543374 TOP2AP11388 1531 aaKnown RBP0.81□□□□□ -2.28
MRPL48-212ENST00000543374 SPINK1P00995 79 aa0.81□□□□□ -2.28
MRPL48-212ENST00000543374 CDC42BPAQ5VT25 1732 aa0.81□□□□□ -2.28
MRPL48-212ENST00000543374 TENM4Q6N022 2769 aa0.8□□□□□ -2.28
MRPL48-212ENST00000543374 RPS27P42677 84 aaKnown RBP0.8□□□□□ -2.28
MRPL48-212ENST00000543374 RPS27LQ71UM5 84 aaKnown RBP0.8□□□□□ -2.28
MRPL48-212ENST00000543374 SMR3AQ99954 134 aa0.8□□□□□ -2.28
MRPL48-212ENST00000543374 TRANK1O15050 2925 aa0.8□□□□□ -2.28
MRPL48-212ENST00000543374 PKDREJQ9NTG1 2253 aa0.8□□□□□ -2.28
MRPL48-212ENST00000543374 CSMD3Q7Z407 3707 aa0.79□□□□□ -2.28
MRPL48-212ENST00000543374 AKAP6Q13023 2319 aa0.79□□□□□ -2.28
MRPL48-212ENST00000543374 TPRP12270 2363 aaKnown RBP0.79□□□□□ -2.28
MRPL48-212ENST00000543374 APCP25054 2843 aa0.79□□□□□ -2.28
MRPL48-212ENST00000543374 H3BUA1 57 aa0.78□□□□□ -2.28
MRPL48-212ENST00000543374 WT1-ASQ06250 92 aa0.78□□□□□ -2.28
MRPL48-212ENST00000543374 ATP7AQ04656 1500 aa0.77□□□□□ -2.29
MRPL48-212ENST00000543374 LMO7Q8WWI1 1683 aa0.77□□□□□ -2.29
MRPL48-212ENST00000543374 FBN2P35556 2912 aa0.77□□□□□ -2.29
MRPL48-212ENST00000543374 ALMS1Q8TCU4 4167 aa0.76□□□□□ -2.29
MRPL48-212ENST00000543374 ABCA2Q9BZC7 2435 aa0.76□□□□□ -2.29
MRPL48-212ENST00000543374 U3KQA8 63 aa0.76□□□□□ -2.29
MRPL48-212ENST00000543374 ATRQ13535 2644 aa0.76□□□□□ -2.29
MRPL48-212ENST00000543374 NOTCH1P46531 2555 aa0.76□□□□□ -2.29
MRPL48-212ENST00000543374 CHD6Q8TD26 2715 aa0.75□□□□□ -2.29
MRPL48-212ENST00000543374 ZNF469Q96JG9 3925 aaPredicted RBP0.75□□□□□ -2.29
MRPL48-212ENST00000543374 SPTA1P02549 2419 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 DSPP15924 2871 aaKnown RBP0.74□□□□□ -2.29
MRPL48-212ENST00000543374 KNL1Q8NG31 2342 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 VWFP04275 2813 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 KRTAP2-3P0C7H8 128 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 KRTAP2-4Q9BYR9 128 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 KRTAP2-1Q9BYU5 128 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 IQGAP1P46940 1657 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 FRAS1Q86XX4 4008 aa0.74□□□□□ -2.29
MRPL48-212ENST00000543374 SMIM2Q9BVW6 85 aa0.73□□□□□ -2.29
MRPL48-212ENST00000543374 TIMM8BQ9Y5J9 83 aaPredicted RBP0.73□□□□□ -2.29
MRPL48-212ENST00000543374 KIF21BO75037 1637 aa0.73□□□□□ -2.29
MRPL48-212ENST00000543374 SAMD9LQ8IVG5 1584 aa0.73□□□□□ -2.29
MRPL48-212ENST00000543374 DDX60Q8IY21 1712 aaKnown RBP0.72□□□□□ -2.29
MRPL48-212ENST00000543374 PRLHP81277 87 aa0.72□□□□□ -2.29
MRPL48-212ENST00000543374 S4R3F8 94 aa0.72□□□□□ -2.29
MRPL48-212ENST00000543374 PDE4DIPQ5VU43 2346 aa0.72□□□□□ -2.29
MRPL48-212ENST00000543374 OTOGQ6ZRI0 2925 aa0.71□□□□□ -2.3
MRPL48-212ENST00000543374 H0YGG7 62 aa0.71□□□□□ -2.3
MRPL48-212ENST00000543374 M0R2T5 61 aa0.71□□□□□ -2.3
MRPL48-212ENST00000543374 DEFB135Q30KP9 77 aa0.71□□□□□ -2.3
MRPL48-212ENST00000543374 TRPM2O94759 1503 aa0.7□□□□□ -2.3
MRPL48-212ENST00000543374 UNC79Q9P2D8 2635 aa0.7□□□□□ -2.3
MRPL48-212ENST00000543374 PTPN13Q12923 2485 aa0.7□□□□□ -2.3
MRPL48-212ENST00000543374 ZFYVE26Q68DK2 2539 aa0.69□□□□□ -2.3
MRPL48-212ENST00000543374 DEFB106AQ8N104 65 aa0.69□□□□□ -2.3
MRPL48-212ENST00000543374 HECTD1Q9ULT8 2610 aa0.68□□□□□ -2.3
MRPL48-212ENST00000543374 AKAP13Q12802 2813 aa0.68□□□□□ -2.3
MRPL48-212ENST00000543374 NOP10Q9NPE3 64 aaKnown RBP0.68□□□□□ -2.3
MRPL48-212ENST00000543374 PRRC2CQ9Y520 2896 aaKnown RBP0.68□□□□□ -2.3
MRPL48-212ENST00000543374 CHD8Q9HCK8 2581 aa0.67□□□□□ -2.3
MRPL48-212ENST00000543374 NDUFA1O15239 70 aa0.67□□□□□ -2.3
MRPL48-212ENST00000543374 NFAT5O94916 1531 aa0.67□□□□□ -2.3
MRPL48-212ENST00000543374 TFF3Q07654 80 aa0.66□□□□□ -2.3
MRPL48-212ENST00000543374 EP300Q09472 2414 aaPredicted RBP0.65□□□□□ -2.31
MRPL48-212ENST00000543374 DEFB131AP59861 70 aa0.65□□□□□ -2.31
MRPL48-212ENST00000543374 WFDC10BQ8IUB3 73 aa0.65□□□□□ -2.31
MRPL48-212ENST00000543374 IGF2RP11717 2491 aa0.65□□□□□ -2.31
MRPL48-212ENST00000543374 CSPG4Q6UVK1 2322 aa0.65□□□□□ -2.31
MRPL48-212ENST00000543374 PCNX1Q96RV3 2341 aa0.65□□□□□ -2.31
MRPL48-212ENST00000543374 KAAG1Q9UBP8 84 aa0.64□□□□□ -2.31
MRPL48-212ENST00000543374 PRKDCP78527 4128 aaKnown RBP0.64□□□□□ -2.31
MRPL48-212ENST00000543374 TNXBP22105 4242 aa0.64□□□□□ -2.31
MRPL48-212ENST00000543374 CREBBPQ92793 2442 aa0.64□□□□□ -2.31
MRPL48-212ENST00000543374 NCOR1O75376 2440 aa0.63□□□□□ -2.31
MRPL48-212ENST00000543374 IGLV5-48A0A075B6I7 105 aa0.63□□□□□ -2.31
MRPL48-212ENST00000543374 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
MRPL48-212ENST00000543374 CLTCL1P53675 1640 aa0.61□□□□□ -2.31
MRPL48-212ENST00000543374 CEP290O15078 2479 aa0.61□□□□□ -2.31
MRPL48-212ENST00000543374 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
MRPL48-212ENST00000543374 HUWE1Q7Z6Z7 4374 aaKnown RBP0.6□□□□□ -2.31
MRPL48-212ENST00000543374 MAP1BP46821 2468 aaKnown RBP0.6□□□□□ -2.31
MRPL48-212ENST00000543374 C9orf92A6NGG3 77 aa0.6□□□□□ -2.31
MRPL48-212ENST00000543374 PRM1P04553 51 aa0.6□□□□□ -2.31
MRPL48-212ENST00000543374 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
MRPL48-212ENST00000543374 SETXQ7Z333 2677 aaKnown RBP0.6□□□□□ -2.31
MRPL48-212ENST00000543374 BSNQ9UPA5 3926 aa0.59□□□□□ -2.31
MRPL48-212ENST00000543374 PKD1L2Q7Z442 2459 aa0.59□□□□□ -2.32
MRPL48-212ENST00000543374 MMP24-AS1A0A0U1RRL7 71 aa0.58□□□□□ -2.32
MRPL48-212ENST00000543374 A8MTW9 85 aa0.57□□□□□ -2.32
MRPL48-212ENST00000543374 M0QY20 66 aa0.56□□□□□ -2.32
MRPL48-212ENST00000543374 SPRR2DP22532 72 aa0.56□□□□□ -2.32
MRPL48-212ENST00000543374 SNRPGP62308 76 aaKnown RBP0.56□□□□□ -2.32
MRPL48-212ENST00000543374 HIVEP3Q5T1R4 2406 aa0.56□□□□□ -2.32
MRPL48-212ENST00000543374 TNRC18O15417 2968 aaPredicted RBP0.56□□□□□ -2.32
MRPL48-212ENST00000543374 SYNE1Q8NF91 8797 aaKnown RBP0.55□□□□□ -2.32
MRPL48-212ENST00000543374 NAV2Q8IVL1 2488 aa0.54□□□□□ -2.32
MRPL48-212ENST00000543374 CACNA1AO00555 2505 aa0.54□□□□□ -2.32
MRPL48-212ENST00000543374 NCOR2Q9Y618 2525 aa0.54□□□□□ -2.32
MRPL48-212ENST00000543374 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
MRPL48-212ENST00000543374 A0A0C4DFX4 3053 aa0.53□□□□□ -2.32
MRPL48-212ENST00000543374 KMT2AQ03164 3969 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms