RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SPRR4Q96PI1 79 aa5.69□□□□□ -1.5
TNFRSF1A-214ENST00000543048 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
TNFRSF1A-214ENST00000543048 IGLV6-57P01721 117 aa5.68□□□□□ -1.5
TNFRSF1A-214ENST00000543048 B5MCH6 92 aa5.67□□□□□ -1.5
TNFRSF1A-214ENST00000543048 H3BUT2 72 aa5.67□□□□□ -1.5
TNFRSF1A-214ENST00000543048 LYRM7Q5U5X0 104 aa5.67□□□□□ -1.5
TNFRSF1A-214ENST00000543048 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
TNFRSF1A-214ENST00000543048 NAA38Q9BRA0 125 aaKnown RBP5.67□□□□□ -1.5
TNFRSF1A-214ENST00000543048 CBY1Q9Y3M2 126 aa5.67□□□□□ -1.5
TNFRSF1A-214ENST00000543048 PSMB2P49721 201 aa5.66□□□□□ -1.5
TNFRSF1A-214ENST00000543048 C3orf22Q8N5N4 141 aa5.66□□□□□ -1.5
TNFRSF1A-214ENST00000543048 SMIM11BQ8TCY0 68 aa5.66□□□□□ -1.5
TNFRSF1A-214ENST00000543048 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
TNFRSF1A-214ENST00000543048 TRAV23DV6A0A075B6W5 121 aa5.65□□□□□ -1.5
TNFRSF1A-214ENST00000543048 A0A1W2PPM0 123 aa5.65□□□□□ -1.5
TNFRSF1A-214ENST00000543048 TRIAP1O43715 76 aa5.65□□□□□ -1.5
TNFRSF1A-214ENST00000543048 COX6CP09669 75 aa5.64□□□□□ -1.51
TNFRSF1A-214ENST00000543048 FABP2P12104 132 aa5.64□□□□□ -1.51
TNFRSF1A-214ENST00000543048 ERC2-IT1O76042 136 aa5.63□□□□□ -1.51
TNFRSF1A-214ENST00000543048 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
TNFRSF1A-214ENST00000543048 GAGE2AQ6NT46 116 aa5.63□□□□□ -1.51
TNFRSF1A-214ENST00000543048 SPAG11AQ6PDA7 123 aa5.63□□□□□ -1.51
TNFRSF1A-214ENST00000543048 Q6ZRX8 168 aa5.63□□□□□ -1.51
TNFRSF1A-214ENST00000543048 Q9BRP9 147 aa5.63□□□□□ -1.51
TNFRSF1A-214ENST00000543048 A0A1B0GV90 55 aa5.62□□□□□ -1.51
TNFRSF1A-214ENST00000543048 ZNF73O43830 326 aaPredicted RBP5.62□□□□□ -1.51
TNFRSF1A-214ENST00000543048 SCGB1C2P0DMR2 95 aa5.62□□□□□ -1.51
TNFRSF1A-214ENST00000543048 VAMP3Q15836 100 aa5.62□□□□□ -1.51
TNFRSF1A-214ENST00000543048 C6orf99Q4VX62 202 aa5.62□□□□□ -1.51
TNFRSF1A-214ENST00000543048 SPCS1Q9Y6A9 102 aa5.62□□□□□ -1.51
TNFRSF1A-214ENST00000543048 TRBV20-1A0A075B6N2 111 aa5.6□□□□□ -1.51
TNFRSF1A-214ENST00000543048 TRBV7-6A0A0J9YX20 115 aa5.6□□□□□ -1.51
TNFRSF1A-214ENST00000543048 H0YGX0 51 aa5.6□□□□□ -1.51
TNFRSF1A-214ENST00000543048 K7EP34 96 aa5.6□□□□□ -1.51
TNFRSF1A-214ENST00000543048 Q8NBF4 154 aa5.6□□□□□ -1.51
TNFRSF1A-214ENST00000543048 TCL1BO95988 128 aa5.59□□□□□ -1.51
TNFRSF1A-214ENST00000543048 ELOF1P60002 83 aaKnown RBP5.59□□□□□ -1.51
TNFRSF1A-214ENST00000543048 GTF2H5Q6ZYL4 71 aa5.59□□□□□ -1.51
TNFRSF1A-214ENST00000543048 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
TNFRSF1A-214ENST00000543048 CLEC2BQ92478 149 aa5.59□□□□□ -1.51
TNFRSF1A-214ENST00000543048 RETNLBQ9BQ08 111 aa5.59□□□□□ -1.51
TNFRSF1A-214ENST00000543048 LST1O00453 97 aa5.58□□□□□ -1.52
TNFRSF1A-214ENST00000543048 COX7BP24311 80 aa5.58□□□□□ -1.52
TNFRSF1A-214ENST00000543048 ATXN8Q156A1 80 aa5.58□□□□□ -1.52
TNFRSF1A-214ENST00000543048 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
TNFRSF1A-214ENST00000543048 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
TNFRSF1A-214ENST00000543048 SPINK1P00995 79 aa5.57□□□□□ -1.52
TNFRSF1A-214ENST00000543048 FAM218AQ96MZ4 157 aa5.57□□□□□ -1.52
TNFRSF1A-214ENST00000543048 DHRS4-AS1Q9P1J3 65 aa5.57□□□□□ -1.52
TNFRSF1A-214ENST00000543048 A0A1B0GX51 115 aa5.56□□□□□ -1.52
TNFRSF1A-214ENST00000543048 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
TNFRSF1A-214ENST00000543048 TRACP01848 142 aa5.56□□□□□ -1.52
TNFRSF1A-214ENST00000543048 MOBPQ13875 183 aa5.56□□□□□ -1.52
TNFRSF1A-214ENST00000543048 LINC00575Q6W349 94 aa5.56□□□□□ -1.52
TNFRSF1A-214ENST00000543048 ST20-AS1Q8NBB2 130 aa5.56□□□□□ -1.52
TNFRSF1A-214ENST00000543048 H3BMG7 143 aa5.55□□□□□ -1.52
TNFRSF1A-214ENST00000543048 SLC25A20O43772 301 aa5.55□□□□□ -1.52
TNFRSF1A-214ENST00000543048 SNCGO76070 127 aa5.55□□□□□ -1.52
TNFRSF1A-214ENST00000543048 DNAL4O96015 105 aa5.54□□□□□ -1.52
TNFRSF1A-214ENST00000543048 UBE2V1Q13404 147 aa5.54□□□□□ -1.52
TNFRSF1A-214ENST00000543048 hADV29S1A0JD25 119 aa5.53□□□□□ -1.52
TNFRSF1A-214ENST00000543048 SPRR1BP22528 89 aa5.53□□□□□ -1.52
TNFRSF1A-214ENST00000543048 TPRXLQ17RH7 258 aa5.53□□□□□ -1.52
TNFRSF1A-214ENST00000543048 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
TNFRSF1A-214ENST00000543048 FP248Q71RG6 208 aaPredicted RBP5.53□□□□□ -1.52
TNFRSF1A-214ENST00000543048 C9JAW5 83 aa5.52□□□□□ -1.53
TNFRSF1A-214ENST00000543048 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
TNFRSF1A-214ENST00000543048 LAMTOR3Q9UHA4 124 aa5.52□□□□□ -1.53
TNFRSF1A-214ENST00000543048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.51□□□□□ -1.53
TNFRSF1A-214ENST00000543048 H3BT86 120 aa5.5□□□□□ -1.53
TNFRSF1A-214ENST00000543048 Q6ZQY7 126 aa5.5□□□□□ -1.53
TNFRSF1A-214ENST00000543048 MTURNQ8N3F0 131 aa5.5□□□□□ -1.53
TNFRSF1A-214ENST00000543048 DEFB105AQ8NG35 78 aa5.5□□□□□ -1.53
TNFRSF1A-214ENST00000543048 ORMDL1Q9P0S3 153 aa5.5□□□□□ -1.53
TNFRSF1A-214ENST00000543048 PRO0461Q9UI25 63 aa5.5□□□□□ -1.53
TNFRSF1A-214ENST00000543048 TEX49A0A1B0GTD5 131 aa5.49□□□□□ -1.53
TNFRSF1A-214ENST00000543048 F8W1H4 67 aa5.49□□□□□ -1.53
TNFRSF1A-214ENST00000543048 OCIAD2Q56VL3 154 aa5.49□□□□□ -1.53
TNFRSF1A-214ENST00000543048 Q8N377 158 aa5.49□□□□□ -1.53
TNFRSF1A-214ENST00000543048 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
TNFRSF1A-214ENST00000543048 MUC2Q02817 5179 aa5.48□□□□□ -1.53
TNFRSF1A-214ENST00000543048 H3BQ85 93 aa5.48□□□□□ -1.53
TNFRSF1A-214ENST00000543048 ANKRD29Q8N6D5 301 aa5.48□□□□□ -1.53
TNFRSF1A-214ENST00000543048 BAALC-AS2P0C853 105 aa5.47□□□□□ -1.53
TNFRSF1A-214ENST00000543048 IGLV5-48A0A075B6I7 105 aa5.46□□□□□ -1.54
TNFRSF1A-214ENST00000543048 TMEM256-PLSCR3K7ERE1 68 aa5.46□□□□□ -1.54
TNFRSF1A-214ENST00000543048 KRTAP13-3Q3SY46 172 aa5.46□□□□□ -1.54
TNFRSF1A-214ENST00000543048 PPDPFLQ8WWR9 84 aa5.46□□□□□ -1.54
TNFRSF1A-214ENST00000543048 LINC01547P58512 204 aaPredicted RBP5.45□□□□□ -1.54
TNFRSF1A-214ENST00000543048 HRCT1Q6UXD1 115 aa5.45□□□□□ -1.54
TNFRSF1A-214ENST00000543048 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
TNFRSF1A-214ENST00000543048 A0A0U1RQV1 116 aa5.44□□□□□ -1.54
TNFRSF1A-214ENST00000543048 CD164Q04900 197 aa5.44□□□□□ -1.54
TNFRSF1A-214ENST00000543048 TEN1Q86WV5 123 aa5.43□□□□□ -1.54
TNFRSF1A-214ENST00000543048 LIMD2Q9BT23 127 aa5.43□□□□□ -1.54
TNFRSF1A-214ENST00000543048 ETDBQ3ZM63 59 aa5.42□□□□□ -1.54
TNFRSF1A-214ENST00000543048 JMJD7-PLA2G4BH0Y9G9 81 aa5.4□□□□□ -1.54
TNFRSF1A-214ENST00000543048 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.54
TNFRSF1A-214ENST00000543048 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
TNFRSF1A-214ENST00000543048 ASB16-AS1Q495Z4 193 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms