RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 LINC01554Q52M75 96 aa5.29□□□□□ -1.56
FNDC3A-206ENST00000541916 HIVEP1P15822 2718 aa5.29□□□□□ -1.56
FNDC3A-206ENST00000541916 FP248Q71RG6 208 aaPredicted RBP5.28□□□□□ -1.56
FNDC3A-206ENST00000541916 COL6A3P12111 3177 aa5.27□□□□□ -1.57
FNDC3A-206ENST00000541916 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
FNDC3A-206ENST00000541916 XIRP2A4UGR9 3374 aa5.25□□□□□ -1.57
FNDC3A-206ENST00000541916 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
FNDC3A-206ENST00000541916 UNC80Q8N2C7 3258 aa5.24□□□□□ -1.57
FNDC3A-206ENST00000541916 IGLV5-48A0A075B6I7 105 aa5.23□□□□□ -1.57
FNDC3A-206ENST00000541916 COA5Q86WW8 74 aa5.23□□□□□ -1.57
FNDC3A-206ENST00000541916 TRIOO75962 3097 aa5.23□□□□□ -1.57
FNDC3A-206ENST00000541916 A0A1W2PNM2 257 aa5.23□□□□□ -1.57
FNDC3A-206ENST00000541916 TENM4Q6N022 2769 aa5.22□□□□□ -1.57
FNDC3A-206ENST00000541916 PANO1I0J062 215 aa5.22□□□□□ -1.57
FNDC3A-206ENST00000541916 Q6ZRN7 208 aaPredicted RBP5.21□□□□□ -1.57
FNDC3A-206ENST00000541916 UBR5O95071 2799 aaPredicted RBP5.21□□□□□ -1.58
FNDC3A-206ENST00000541916 REV3LO60673 3130 aa5.21□□□□□ -1.58
FNDC3A-206ENST00000541916 KRTAP26-1Q6PEX3 210 aa5.2□□□□□ -1.58
FNDC3A-206ENST00000541916 FLNCQ14315 2725 aa5.19□□□□□ -1.58
FNDC3A-206ENST00000541916 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
FNDC3A-206ENST00000541916 KMT2BQ9UMN6 2715 aaPredicted RBP5.17□□□□□ -1.58
FNDC3A-206ENST00000541916 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
FNDC3A-206ENST00000541916 EYSQ5T1H1 3165 aa5.17□□□□□ -1.58
FNDC3A-206ENST00000541916 FRYQ5TBA9 3013 aa5.17□□□□□ -1.58
FNDC3A-206ENST00000541916 STAB2Q8WWQ8 2551 aa5.16□□□□□ -1.58
FNDC3A-206ENST00000541916 DNAH14Q0VDD8 3507 aa5.16□□□□□ -1.58
FNDC3A-206ENST00000541916 NSD1Q96L73 2696 aaPredicted RBP5.16□□□□□ -1.58
FNDC3A-206ENST00000541916 ITPR1Q14643 2758 aa5.16□□□□□ -1.58
FNDC3A-206ENST00000541916 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
FNDC3A-206ENST00000541916 Q8NDZ9 215 aa5.16□□□□□ -1.58
FNDC3A-206ENST00000541916 LINC01600Q96MT4 127 aa5.14□□□□□ -1.59
FNDC3A-206ENST00000541916 S4R3F8 94 aa5.14□□□□□ -1.59
FNDC3A-206ENST00000541916 FRYLO94915 3013 aa5.14□□□□□ -1.59
FNDC3A-206ENST00000541916 SPTBN5Q9NRC6 3674 aaKnown RBP5.14□□□□□ -1.59
FNDC3A-206ENST00000541916 SPRR1AP35321 89 aa5.14□□□□□ -1.59
FNDC3A-206ENST00000541916 CRYBG3Q68DQ2 2970 aa5.13□□□□□ -1.59
FNDC3A-206ENST00000541916 A8MUN3 132 aa5.13□□□□□ -1.59
FNDC3A-206ENST00000541916 HRES1P13985 223 aa5.13□□□□□ -1.59
FNDC3A-206ENST00000541916 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
FNDC3A-206ENST00000541916 LAMA2P24043 3122 aaKnown RBP5.12□□□□□ -1.59
FNDC3A-206ENST00000541916 MAP1AP78559 2803 aaPredicted RBP5.12□□□□□ -1.59
FNDC3A-206ENST00000541916 A0A087X002 238 aa5.12□□□□□ -1.59
FNDC3A-206ENST00000541916 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
FNDC3A-206ENST00000541916 COL12A1Q99715 3063 aa5.11□□□□□ -1.59
FNDC3A-206ENST00000541916 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
FNDC3A-206ENST00000541916 UTP20O75691 2785 aaKnown RBP5.11□□□□□ -1.59
FNDC3A-206ENST00000541916 SPINK7P58062 85 aa5.11□□□□□ -1.59
FNDC3A-206ENST00000541916 DMXL2Q8TDJ6 3036 aa5.11□□□□□ -1.59
FNDC3A-206ENST00000541916 KLKP1Q107X0 134 aa5.11□□□□□ -1.59
FNDC3A-206ENST00000541916 APCP25054 2843 aa5.11□□□□□ -1.59
FNDC3A-206ENST00000541916 SPRR1BP22528 89 aa5.1□□□□□ -1.59
FNDC3A-206ENST00000541916 ATMQ13315 3056 aa5.1□□□□□ -1.59
FNDC3A-206ENST00000541916 LINC00483Q53H64 154 aa5.09□□□□□ -1.59
FNDC3A-206ENST00000541916 A0A0D9SG42 100 aa5.08□□□□□ -1.6
FNDC3A-206ENST00000541916 H7BZZ5 65 aa5.08□□□□□ -1.6
FNDC3A-206ENST00000541916 UQCR11O14957 56 aa5.08□□□□□ -1.6
FNDC3A-206ENST00000541916 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
FNDC3A-206ENST00000541916 TACC2O95359 2948 aa5.05□□□□□ -1.6
FNDC3A-206ENST00000541916 CYP4F30PQ9H0H9 118 aa5.05□□□□□ -1.6
FNDC3A-206ENST00000541916 VPS13AQ96RL7 3174 aa5.04□□□□□ -1.6
FNDC3A-206ENST00000541916 SPANXA2-OT1Q8N9U9 137 aa5.03□□□□□ -1.6
FNDC3A-206ENST00000541916 OCR1Q9BZK8 76 aa5.03□□□□□ -1.6
FNDC3A-206ENST00000541916 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
FNDC3A-206ENST00000541916 CELSR3Q9NYQ7 3312 aa5.03□□□□□ -1.6
FNDC3A-206ENST00000541916 NBEAQ8NFP9 2946 aa5.02□□□□□ -1.61
FNDC3A-206ENST00000541916 R4GN34 69 aa5.02□□□□□ -1.61
FNDC3A-206ENST00000541916 VCANP13611 3396 aa5.01□□□□□ -1.61
FNDC3A-206ENST00000541916 MMP24-AS1A0A0U1RRL7 71 aa5.01□□□□□ -1.61
FNDC3A-206ENST00000541916 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
FNDC3A-206ENST00000541916 DMXL1Q9Y485 3027 aa5.01□□□□□ -1.61
FNDC3A-206ENST00000541916 LCA10Q71F78 164 aa5□□□□□ -1.61
FNDC3A-206ENST00000541916 DMBT1Q9UGM3 2413 aaPredicted RBP4.99□□□□□ -1.61
FNDC3A-206ENST00000541916 ASH1LQ9NR48 2969 aaKnown RBP4.98□□□□□ -1.61
FNDC3A-206ENST00000541916 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
FNDC3A-206ENST00000541916 NBEAL2Q6ZNJ1 2754 aa4.96□□□□□ -1.61
FNDC3A-206ENST00000541916 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.61
FNDC3A-206ENST00000541916 USP34Q70CQ2 3546 aa4.96□□□□□ -1.62
FNDC3A-206ENST00000541916 LAMA1P25391 3075 aa4.96□□□□□ -1.62
FNDC3A-206ENST00000541916 KRTAP29-1A8MX34 341 aaPredicted RBP4.95□□□□□ -1.62
FNDC3A-206ENST00000541916 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
FNDC3A-206ENST00000541916 LRBAP50851 2863 aa4.95□□□□□ -1.62
FNDC3A-206ENST00000541916 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
FNDC3A-206ENST00000541916 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
FNDC3A-206ENST00000541916 C20orf166-AS1Q96NR2 134 aa4.95□□□□□ -1.62
FNDC3A-206ENST00000541916 Q5W150 140 aa4.95□□□□□ -1.62
FNDC3A-206ENST00000541916 KALRNO60229 2985 aa4.94□□□□□ -1.62
FNDC3A-206ENST00000541916 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
FNDC3A-206ENST00000541916 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
FNDC3A-206ENST00000541916 BOD1L1Q8NFC6 3051 aa4.92□□□□□ -1.62
FNDC3A-206ENST00000541916 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
FNDC3A-206ENST00000541916 M0QZ58 72 aa4.91□□□□□ -1.62
FNDC3A-206ENST00000541916 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
FNDC3A-206ENST00000541916 Q75L30 129 aa4.91□□□□□ -1.62
FNDC3A-206ENST00000541916 FLG2Q5D862 2391 aaPredicted RBP4.89□□□□□ -1.63
FNDC3A-206ENST00000541916 H1FX-AS1Q4G0G2 97 aa4.89□□□□□ -1.63
FNDC3A-206ENST00000541916 A0A1B0GU33 70 aa4.88□□□□□ -1.63
FNDC3A-206ENST00000541916 Q1T7F1 81 aa4.88□□□□□ -1.63
FNDC3A-206ENST00000541916 FREM2Q5SZK8 3169 aa4.87□□□□□ -1.63
FNDC3A-206ENST00000541916 ZZEF1O43149 2961 aa4.86□□□□□ -1.63
FNDC3A-206ENST00000541916 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms