RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 Q6ZRX8 168 aa5.29□□□□□ -1.56
CHD4-208ENST00000540960 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
CHD4-208ENST00000540960 DSCR8Q96T75 97 aa5.29□□□□□ -1.56
CHD4-208ENST00000540960 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
CHD4-208ENST00000540960 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.28□□□□□ -1.56
CHD4-208ENST00000540960 A0A1B0GW54 56 aa5.28□□□□□ -1.56
CHD4-208ENST00000540960 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
CHD4-208ENST00000540960 H0Y9J4 135 aa5.28□□□□□ -1.56
CHD4-208ENST00000540960 SCGB1A1P11684 91 aa5.28□□□□□ -1.56
CHD4-208ENST00000540960 SDIM1Q6ZPB5 146 aa5.28□□□□□ -1.56
CHD4-208ENST00000540960 Q6ZQY7 126 aa5.28□□□□□ -1.56
CHD4-208ENST00000540960 FAM19A5Q7Z5A7 132 aaPredicted RBP5.28□□□□□ -1.56
CHD4-208ENST00000540960 A0A096LNI7 61 aa5.27□□□□□ -1.57
CHD4-208ENST00000540960 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
CHD4-208ENST00000540960 LOC110117498A0A087WWA1 95 aa5.26□□□□□ -1.57
CHD4-208ENST00000540960 RPL37AP8A6NKH3 93 aa5.26□□□□□ -1.57
CHD4-208ENST00000540960 B5MCH6 92 aa5.26□□□□□ -1.57
CHD4-208ENST00000540960 CCKP06307 115 aa5.26□□□□□ -1.57
CHD4-208ENST00000540960 UBE2BP63146 152 aa5.26□□□□□ -1.57
CHD4-208ENST00000540960 IGLV5-52A0A0A0MRZ9 124 aa5.25□□□□□ -1.57
CHD4-208ENST00000540960 GAGE2AQ6NT46 116 aa5.25□□□□□ -1.57
CHD4-208ENST00000540960 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
CHD4-208ENST00000540960 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
CHD4-208ENST00000540960 KRTAP4-16G5E9R7 235 aaPredicted RBP5.24□□□□□ -1.57
CHD4-208ENST00000540960 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
CHD4-208ENST00000540960 FAM168BA1KXE4 195 aa5.23□□□□□ -1.57
CHD4-208ENST00000540960 F8WEM9 126 aa5.23□□□□□ -1.57
CHD4-208ENST00000540960 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
CHD4-208ENST00000540960 ATP5EP2Q5VTU8 51 aa5.23□□□□□ -1.57
CHD4-208ENST00000540960 SPACA4Q8TDM5 124 aa5.23□□□□□ -1.57
CHD4-208ENST00000540960 C14orf132Q9NPU4 83 aa5.23□□□□□ -1.57
CHD4-208ENST00000540960 IGLV5-48A0A075B6I7 105 aa5.22□□□□□ -1.57
CHD4-208ENST00000540960 A0A1W2PNN7 141 aa5.22□□□□□ -1.57
CHD4-208ENST00000540960 UBL5Q9BZL1 73 aa5.22□□□□□ -1.57
CHD4-208ENST00000540960 CDIP1Q9H305 208 aa5.22□□□□□ -1.57
CHD4-208ENST00000540960 BCE1O60756 84 aa5.21□□□□□ -1.58
CHD4-208ENST00000540960 UBE2AP49459 152 aa5.21□□□□□ -1.58
CHD4-208ENST00000540960 Q6Q795 121 aa5.21□□□□□ -1.58
CHD4-208ENST00000540960 Q6ZSA8 131 aa5.21□□□□□ -1.58
CHD4-208ENST00000540960 FAM19A1Q7Z5A9 133 aa5.21□□□□□ -1.58
CHD4-208ENST00000540960 ZNF706Q9Y5V0 76 aaPredicted RBP5.21□□□□□ -1.58
CHD4-208ENST00000540960 A0A0U1RQV1 116 aa5.2□□□□□ -1.58
CHD4-208ENST00000540960 PCP4P48539 62 aa5.2□□□□□ -1.58
CHD4-208ENST00000540960 SCXQ7RTU7 201 aa5.2□□□□□ -1.58
CHD4-208ENST00000540960 KRTAP7-1Q8IUC3 87 aa5.2□□□□□ -1.58
CHD4-208ENST00000540960 PLAC8Q9NZF1 115 aa5.2□□□□□ -1.58
CHD4-208ENST00000540960 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
CHD4-208ENST00000540960 Q6ZQT0 140 aa5.19□□□□□ -1.58
CHD4-208ENST00000540960 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
CHD4-208ENST00000540960 CHTF8P0CG12 524 aa5.17□□□□□ -1.58
CHD4-208ENST00000540960 Q6JHZ5 121 aa5.17□□□□□ -1.58
CHD4-208ENST00000540960 PHF5AQ7RTV0 110 aaKnown RBP5.17□□□□□ -1.58
CHD4-208ENST00000540960 Q8N377 158 aa5.17□□□□□ -1.58
CHD4-208ENST00000540960 DEFB105AQ8NG35 78 aa5.17□□□□□ -1.58
CHD4-208ENST00000540960 SMCR5Q8TEV8 140 aa5.17□□□□□ -1.58
CHD4-208ENST00000540960 Q9BRP9 147 aa5.17□□□□□ -1.58
CHD4-208ENST00000540960 SPRR1BP22528 89 aa5.16□□□□□ -1.58
CHD4-208ENST00000540960 RPL37AP61513 92 aaKnown RBP5.16□□□□□ -1.58
CHD4-208ENST00000540960 HIGD2AQ9BW72 106 aa5.16□□□□□ -1.58
CHD4-208ENST00000540960 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
CHD4-208ENST00000540960 IGLV8-61A0A075B6I0 122 aa5.14□□□□□ -1.59
CHD4-208ENST00000540960 MT-ATP8P03928 68 aa5.14□□□□□ -1.59
CHD4-208ENST00000540960 LINC00846Q9NV44 126 aa5.14□□□□□ -1.59
CHD4-208ENST00000540960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.14□□□□□ -1.59
CHD4-208ENST00000540960 LINC01547P58512 204 aaPredicted RBP5.13□□□□□ -1.59
CHD4-208ENST00000540960 CXCL6P80162 114 aa5.13□□□□□ -1.59
CHD4-208ENST00000540960 PRLHP81277 87 aa5.13□□□□□ -1.59
CHD4-208ENST00000540960 C1orf137Q5JT78 98 aa5.13□□□□□ -1.59
CHD4-208ENST00000540960 NREPQ16612 68 aa5.12□□□□□ -1.59
CHD4-208ENST00000540960 CIRBP-AS1Q8TBR5 109 aa5.12□□□□□ -1.59
CHD4-208ENST00000540960 A0A1B0GV72 72 aa5.11□□□□□ -1.59
CHD4-208ENST00000540960 ZNF861PO60384 105 aa5.11□□□□□ -1.59
CHD4-208ENST00000540960 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
CHD4-208ENST00000540960 Q8NBF4 154 aa5.11□□□□□ -1.59
CHD4-208ENST00000540960 ERC2-IT1O76042 136 aa5.1□□□□□ -1.59
CHD4-208ENST00000540960 ST20-AS1Q8NBB2 130 aa5.1□□□□□ -1.59
CHD4-208ENST00000540960 CRYGAP11844 174 aa5.09□□□□□ -1.59
CHD4-208ENST00000540960 SPRR4Q96PI1 79 aa5.09□□□□□ -1.59
CHD4-208ENST00000540960 PSORS1C2Q9UIG4 136 aa5.09□□□□□ -1.59
CHD4-208ENST00000540960 PANO1I0J062 215 aa5.08□□□□□ -1.6
CHD4-208ENST00000540960 LINC00483Q53H64 154 aa5.08□□□□□ -1.6
CHD4-208ENST00000540960 Q6ZVQ6 151 aa5.08□□□□□ -1.6
CHD4-208ENST00000540960 SMIM29Q86T20 159 aa5.08□□□□□ -1.6
CHD4-208ENST00000540960 SMIM20Q8N5G0 67 aa5.08□□□□□ -1.6
CHD4-208ENST00000540960 ATOX1O00244 68 aa5.07□□□□□ -1.6
CHD4-208ENST00000540960 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
CHD4-208ENST00000540960 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
CHD4-208ENST00000540960 BPY2O14599 106 aa5.06□□□□□ -1.6
CHD4-208ENST00000540960 SS18L2Q9UHA2 77 aa5.06□□□□□ -1.6
CHD4-208ENST00000540960 IGKV3D-7A0A0C4DH55 119 aa5.05□□□□□ -1.6
CHD4-208ENST00000540960 HIST1H4AP62805 103 aaKnown RBP5.05□□□□□ -1.6
CHD4-208ENST00000540960 J3KT08 172 aa5.04□□□□□ -1.6
CHD4-208ENST00000540960 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
CHD4-208ENST00000540960 IGFL1Q6UW32 110 aa5.04□□□□□ -1.6
CHD4-208ENST00000540960 KRTAP11-1Q8IUC1 163 aa5.04□□□□□ -1.6
CHD4-208ENST00000540960 FAM236AA0A1B0GUQ0 79 aa5.03□□□□□ -1.6
CHD4-208ENST00000540960 FAM236BA0A1B0GV22 79 aa5.03□□□□□ -1.6
CHD4-208ENST00000540960 A0A1W2PNM2 257 aa5.03□□□□□ -1.6
CHD4-208ENST00000540960 FAM229BQ4G0N7 80 aa5.03□□□□□ -1.6
CHD4-208ENST00000540960 SSBP3-AS1Q7Z2R9 100 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms