RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	C1orf64	Q8NEQ6	169 aa		3.63	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	FAM168B	A1KXE4	195 aa		3.63	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	SEC61G	P60059	68 aa		3.63	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	TNP2	Q05952	138 aa		3.63	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		K7EQZ3	153 aa		3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	C1orf137	Q5JT78	98 aa		3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	C9orf163	Q8N9P6	203 aa		3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		V9GYY9	64 aa		3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	CNBP	P62633	177 aa	Known RBP	3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	KRTAP26-1	Q6PEX3	210 aa		3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	hDV103S1	A0JD37	113 aa		3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		H3BS24	57 aa		3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.62	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		Q9BRP9	147 aa		3.61	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	DSCR10	P59022	87 aa		3.61	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	WFDC13	Q8IUB5	93 aa		3.61	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	IGLV5-48	A0A075B6I7	105 aa		3.61	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		A8MU10	97 aa		3.6	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	KCNQ1DN	Q9H478	68 aa		3.6	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	TENM3	Q9P273	2699 aa		3.6	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	KRTAP3-3	Q9BYR6	98 aa		3.59	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	KRTAP3-2	Q9BYR7	98 aa		3.59	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	REG3G	Q6UW15	175 aa		3.59	□□□□□ -1.83
RAPGEF4-215	ENST00000540783		Q8NBF4	154 aa		3.59	□□□□□ -1.83
RAPGEF4-215	ENST00000540783	TRAV22	A0A0B4J277	110 aa		3.59	□□□□□ -1.84
RAPGEF4-215	ENST00000540783		A8MUN3	132 aa		3.59	□□□□□ -1.84
RAPGEF4-215	ENST00000540783		Q6ZRX8	168 aa		3.59	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	RPL37A	P61513	92 aa	Known RBP	3.58	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	TLX1NB	P0CAT3	122 aa		3.58	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	ZCCHC13	Q8WW36	166 aa	Known RBP	3.58	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	MRPL55	Q7Z7F7	128 aa	Known RBP	3.57	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	DHRS4-AS1	Q9P1J3	65 aa		3.57	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	HCG22	E2RYF7	251 aa		3.57	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	LINC00208	Q96KT6	92 aa		3.57	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	KRTAP7-1	Q8IUC3	87 aa		3.57	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	IGLV1-50	A0A075B6I6	118 aa		3.56	□□□□□ -1.84
RAPGEF4-215	ENST00000540783		Q1T7F1	81 aa		3.56	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	KRTAP1-5	Q9BYS1	174 aa		3.56	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	SRRM2	Q9UQ35	2752 aa	Known RBP	3.56	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	PMAIP1	Q13794	54 aa		3.56	□□□□□ -1.84
RAPGEF4-215	ENST00000540783		A0A087WSZ3	146 aa		3.56	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.56	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	TENM2	Q9NT68	2774 aa		3.55	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	SPRR4	Q96PI1	79 aa		3.55	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	PRLH	P81277	87 aa		3.55	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	PRR15	Q8IV56	129 aa		3.55	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	CSMD3	Q7Z407	3707 aa		3.55	□□□□□ -1.84
RAPGEF4-215	ENST00000540783		A0A096LNI7	61 aa		3.54	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	LCE2D	Q5TA82	110 aa	Predicted RBP	3.54	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	LYST	Q99698	3801 aa		3.54	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	IGFL1	Q6UW32	110 aa		3.54	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	MEGF8	Q7Z7M0	2845 aa		3.54	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	MP68	P56378	58 aa		3.54	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	PLA2G2D	Q9UNK4	145 aa		3.54	□□□□□ -1.84
RAPGEF4-215	ENST00000540783		Q6ZRN7	208 aa	Predicted RBP	3.53	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	CHKB-CPT1B	H3BT56	60 aa		3.53	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	SPRR1A	P35321	89 aa		3.53	□□□□□ -1.84
RAPGEF4-215	ENST00000540783	SPTSSB	Q8NFR3	76 aa		3.53	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	CYP4F30P	Q9H0H9	118 aa		3.53	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	CHTF8	P0CG12	524 aa		3.52	□□□□□ -1.85
RAPGEF4-215	ENST00000540783		H0Y9P7	68 aa		3.52	□□□□□ -1.85
RAPGEF4-215	ENST00000540783		Q5VV11	94 aa		3.52	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	CDK2AP2	O75956	126 aa		3.52	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	PRR15L	Q9BU68	103 aa		3.52	□□□□□ -1.85
RAPGEF4-215	ENST00000540783		A0A1B0GW54	56 aa		3.51	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	PLAC8	Q9NZF1	115 aa		3.51	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	NDUFB1	O75438	58 aa		3.51	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	CASC2	Q6XLA1	102 aa		3.51	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	PHF5A	Q7RTV0	110 aa	Known RBP	3.51	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	SPACA4	Q8TDM5	124 aa		3.51	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	KRTAP17-1	Q9BYP8	105 aa		3.51	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	KRTAP10-2	P60368	255 aa		3.5	□□□□□ -1.85
RAPGEF4-215	ENST00000540783		Q8N9P0	234 aa	Predicted RBP	3.5	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	IGLV5-37	A0A075B6J1	123 aa		3.49	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	SMR3B	P02814	79 aa	Predicted RBP	3.49	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	PCOTH	Q58A44	107 aa		3.49	□□□□□ -1.85
RAPGEF4-215	ENST00000540783		H0Y9J4	135 aa		3.49	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	KRTAP10-1	P60331	282 aa		3.49	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	CIRBP-AS1	Q8TBR5	109 aa		3.49	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	KRTAP29-1	A8MX34	341 aa	Predicted RBP	3.49	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	SPINK6	Q6UWN8	80 aa		3.48	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	DNAH7	Q8WXX0	4024 aa		3.48	□□□□□ -1.85
RAPGEF4-215	ENST00000540783		A6NED7	52 aa		3.48	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	KRTAP11-1	Q8IUC1	163 aa		3.48	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	ZNF861P	O60384	105 aa		3.47	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	IGLV7-43	P04211	117 aa		3.47	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	LCA10	Q71F78	164 aa		3.47	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	DNAH10	Q8IVF4	4471 aa		3.47	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	COL7A1	Q02388	2944 aa		3.47	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	3.47	□□□□□ -1.85
RAPGEF4-215	ENST00000540783		Q5VSD8	79 aa		3.46	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	COA5	Q86WW8	74 aa		3.46	□□□□□ -1.85
RAPGEF4-215	ENST00000540783	DNAH1	Q9P2D7	4330 aa		3.46	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	SPAG11A	Q6PDA7	123 aa		3.46	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	LIMD2	Q9BT23	127 aa		3.46	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	PSORS1C2	Q9UIG4	136 aa		3.45	□□□□□ -1.86
RAPGEF4-215	ENST00000540783		A8MWP4	228 aa		3.45	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	SPANXA2-OT1	Q8N9U9	137 aa		3.44	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	LINC00472	Q9H8W2	130 aa		3.44	□□□□□ -1.86
RAPGEF4-215	ENST00000540783		Q8N1X5	172 aa		3.44	□□□□□ -1.86

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