RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TRBV7-6A0A0J9YX20 115 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 NCR3O14931 201 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 NDUFC1O43677 76 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 FAM19A5Q7Z5A7 132 aaPredicted RBP3.81□□□□□ -1.8
CPSF7-219ENST00000539952 C9orf163Q8N9P6 203 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 KLK12Q9UKR0 248 aa3.81□□□□□ -1.8
CPSF7-219ENST00000539952 LRP2P98164 4655 aa3.8□□□□□ -1.8
CPSF7-219ENST00000539952 IGKV3OR2-268A0A0C4DH90 116 aa3.8□□□□□ -1.8
CPSF7-219ENST00000539952 CXCL6P80162 114 aa3.8□□□□□ -1.8
CPSF7-219ENST00000539952 LINC00575Q6W349 94 aa3.8□□□□□ -1.8
CPSF7-219ENST00000539952 DSCR8Q96T75 97 aa3.8□□□□□ -1.8
CPSF7-219ENST00000539952 ATP5EP56381 51 aaPredicted RBP3.79□□□□□ -1.8
CPSF7-219ENST00000539952 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
CPSF7-219ENST00000539952 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
CPSF7-219ENST00000539952 GVQW2A0A096LPI5 108 aaPredicted RBP3.78□□□□□ -1.8
CPSF7-219ENST00000539952 A0A1B0GW54 56 aa3.78□□□□□ -1.8
CPSF7-219ENST00000539952 F8WDY8 70 aa3.78□□□□□ -1.8
CPSF7-219ENST00000539952 SLPIP03973 132 aa3.78□□□□□ -1.8
CPSF7-219ENST00000539952 XCL1P47992 114 aa3.78□□□□□ -1.8
CPSF7-219ENST00000539952 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.78□□□□□ -1.8
CPSF7-219ENST00000539952 Q6ZQT0 140 aa3.78□□□□□ -1.8
CPSF7-219ENST00000539952 LAMTOR3Q9UHA4 124 aa3.78□□□□□ -1.8
CPSF7-219ENST00000539952 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
CPSF7-219ENST00000539952 ERC2-IT1O76042 136 aa3.77□□□□□ -1.81
CPSF7-219ENST00000539952 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
CPSF7-219ENST00000539952 REG3AQ06141 175 aa3.77□□□□□ -1.81
CPSF7-219ENST00000539952 KLKP1Q107X0 134 aa3.77□□□□□ -1.81
CPSF7-219ENST00000539952 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
CPSF7-219ENST00000539952 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
CPSF7-219ENST00000539952 ENHOQ6UWT2 76 aa3.77□□□□□ -1.81
CPSF7-219ENST00000539952 C7orf33Q8WU49 177 aa3.77□□□□□ -1.81
CPSF7-219ENST00000539952 CHCHD10Q8WYQ3 142 aaPredicted RBP3.77□□□□□ -1.81
CPSF7-219ENST00000539952 A0A087WVE0 104 aa3.76□□□□□ -1.81
CPSF7-219ENST00000539952 FAM236DA0A1B0GTK5 79 aa3.76□□□□□ -1.81
CPSF7-219ENST00000539952 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
CPSF7-219ENST00000539952 FAM236CP0DP71 79 aa3.76□□□□□ -1.81
CPSF7-219ENST00000539952 REG3GQ6UW15 175 aa3.76□□□□□ -1.81
CPSF7-219ENST00000539952 PKHD1L1Q86WI1 4243 aa3.75□□□□□ -1.81
CPSF7-219ENST00000539952 TRAV23DV6A0A075B6W5 121 aa3.75□□□□□ -1.81
CPSF7-219ENST00000539952 PANO1I0J062 215 aa3.75□□□□□ -1.81
CPSF7-219ENST00000539952 ANGP03950 147 aaKnown RBP3.75□□□□□ -1.81
CPSF7-219ENST00000539952 LINC01547P58512 204 aaPredicted RBP3.75□□□□□ -1.81
CPSF7-219ENST00000539952 CNBPP62633 177 aaKnown RBP3.75□□□□□ -1.81
CPSF7-219ENST00000539952 SPINK6Q6UWN8 80 aa3.75□□□□□ -1.81
CPSF7-219ENST00000539952 LINC00269Q8N2A0 174 aa3.75□□□□□ -1.81
CPSF7-219ENST00000539952 DIRC1Q969H9 104 aa3.75□□□□□ -1.81
CPSF7-219ENST00000539952 SMIM26A0A096LP01 95 aa3.74□□□□□ -1.81
CPSF7-219ENST00000539952 A0A0U1RQV1 116 aa3.74□□□□□ -1.81
CPSF7-219ENST00000539952 COX7BP24311 80 aa3.74□□□□□ -1.81
CPSF7-219ENST00000539952 Q6ZVQ6 151 aa3.74□□□□□ -1.81
CPSF7-219ENST00000539952 C20orf197Q8N268 126 aa3.74□□□□□ -1.81
CPSF7-219ENST00000539952 PLAC8Q9NZF1 115 aa3.74□□□□□ -1.81
CPSF7-219ENST00000539952 TRBV7-4A0A0J9YYF1 115 aa3.73□□□□□ -1.81
CPSF7-219ENST00000539952 M0R378 163 aa3.73□□□□□ -1.81
CPSF7-219ENST00000539952 SPAG11BQ08648 103 aa3.73□□□□□ -1.81
CPSF7-219ENST00000539952 FAM19A1Q7Z5A9 133 aa3.73□□□□□ -1.81
CPSF7-219ENST00000539952 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
CPSF7-219ENST00000539952 TNXBP22105 4242 aa3.72□□□□□ -1.81
CPSF7-219ENST00000539952 ELOF1P60002 83 aaKnown RBP3.72□□□□□ -1.81
CPSF7-219ENST00000539952 PRR3P79522 188 aaKnown RBP3.72□□□□□ -1.81
CPSF7-219ENST00000539952 Q6ZQY7 126 aa3.72□□□□□ -1.81
CPSF7-219ENST00000539952 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
CPSF7-219ENST00000539952 H7BZZ5 65 aa3.71□□□□□ -1.82
CPSF7-219ENST00000539952 ZNF73O43830 326 aaPredicted RBP3.71□□□□□ -1.82
CPSF7-219ENST00000539952 KRTAP26-1Q6PEX3 210 aa3.71□□□□□ -1.82
CPSF7-219ENST00000539952 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
CPSF7-219ENST00000539952 NREPQ16612 68 aa3.7□□□□□ -1.82
CPSF7-219ENST00000539952 Q5XG85 94 aa3.7□□□□□ -1.82
CPSF7-219ENST00000539952 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
CPSF7-219ENST00000539952 IGLV10-54A0A075B6I4 117 aa3.69□□□□□ -1.82
CPSF7-219ENST00000539952 CHTF8P0CG12 524 aa3.69□□□□□ -1.82
CPSF7-219ENST00000539952 HIGD2BQ4VC39 106 aa3.69□□□□□ -1.82
CPSF7-219ENST00000539952 C9orf116Q5BN46 136 aaPredicted RBP3.69□□□□□ -1.82
CPSF7-219ENST00000539952 CLPSL2Q6UWE3 100 aa3.69□□□□□ -1.82
CPSF7-219ENST00000539952 Q6ZRP5 223 aa3.69□□□□□ -1.82
CPSF7-219ENST00000539952 LINC00474Q9P2X8 69 aa3.69□□□□□ -1.82
CPSF7-219ENST00000539952 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
CPSF7-219ENST00000539952 F8WEM9 126 aa3.68□□□□□ -1.82
CPSF7-219ENST00000539952 BPY2O14599 106 aa3.68□□□□□ -1.82
CPSF7-219ENST00000539952 C4orf26Q17RF5 130 aa3.68□□□□□ -1.82
CPSF7-219ENST00000539952 CAMK2N2Q96S95 79 aa3.68□□□□□ -1.82
CPSF7-219ENST00000539952 DHRS4-AS1Q9P1J3 65 aa3.68□□□□□ -1.82
CPSF7-219ENST00000539952 PSORS1C2Q9UIG4 136 aa3.68□□□□□ -1.82
CPSF7-219ENST00000539952 PKIGQ9Y2B9 76 aa3.68□□□□□ -1.82
CPSF7-219ENST00000539952 VPREB1P12018 145 aa3.67□□□□□ -1.82
CPSF7-219ENST00000539952 C10orf25Q5T742 122 aa3.67□□□□□ -1.82
CPSF7-219ENST00000539952 HRCT1Q6UXD1 115 aa3.67□□□□□ -1.82
CPSF7-219ENST00000539952 TMEM254Q8TBM7 123 aa3.67□□□□□ -1.82
CPSF7-219ENST00000539952 C6orf48Q9UBA6 75 aa3.67□□□□□ -1.82
CPSF7-219ENST00000539952 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
CPSF7-219ENST00000539952 KCNQ1DNQ9H478 68 aa3.66□□□□□ -1.82
CPSF7-219ENST00000539952 IGLV5-48A0A075B6I7 105 aa3.65□□□□□ -1.83
CPSF7-219ENST00000539952 NKAPP1Q8N9T2 125 aa3.65□□□□□ -1.83
CPSF7-219ENST00000539952 Q8NDZ9 215 aa3.65□□□□□ -1.83
CPSF7-219ENST00000539952 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
CPSF7-219ENST00000539952 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
CPSF7-219ENST00000539952 PRYO14603 147 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms