RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
DDB1-211ENST00000538280 LRCOL1A6NCL2 159 aa5.82□□□□□ -1.48
DDB1-211ENST00000538280 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
DDB1-211ENST00000538280 SMIM29Q86T20 159 aa5.82□□□□□ -1.48
DDB1-211ENST00000538280 Q8NBF4 154 aa5.82□□□□□ -1.48
DDB1-211ENST00000538280 SPRR4Q96PI1 79 aa5.82□□□□□ -1.48
DDB1-211ENST00000538280 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
DDB1-211ENST00000538280 PSCAO43653 123 aa5.81□□□□□ -1.48
DDB1-211ENST00000538280 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
DDB1-211ENST00000538280 C1orf137Q5JT78 98 aa5.81□□□□□ -1.48
DDB1-211ENST00000538280 PKIGQ9Y2B9 76 aa5.81□□□□□ -1.48
DDB1-211ENST00000538280 IGLV8-61A0A075B6I0 122 aa5.8□□□□□ -1.48
DDB1-211ENST00000538280 NBDYA0A0U1RRE5 68 aa5.8□□□□□ -1.48
DDB1-211ENST00000538280 UBE2BP63146 152 aa5.8□□□□□ -1.48
DDB1-211ENST00000538280 NREPQ16612 68 aa5.8□□□□□ -1.48
DDB1-211ENST00000538280 C9orf163Q8N9P6 203 aa5.8□□□□□ -1.48
DDB1-211ENST00000538280 H0Y9J4 135 aa5.79□□□□□ -1.48
DDB1-211ENST00000538280 FUSP35637 526 aaKnown RBP eCLIP5.79□□□□□ -1.48
DDB1-211ENST00000538280 TMEM258P61165 79 aa5.79□□□□□ -1.48
DDB1-211ENST00000538280 SCXQ7RTU7 201 aa5.79□□□□□ -1.48
DDB1-211ENST00000538280 IGKV2-24A0A0C4DH68 120 aa5.78□□□□□ -1.48
DDB1-211ENST00000538280 A0A1B0GVY2 172 aa5.78□□□□□ -1.48
DDB1-211ENST00000538280 EPM2AB3EWF7 344 aa5.78□□□□□ -1.48
DDB1-211ENST00000538280 SPRR1BP22528 89 aa5.78□□□□□ -1.48
DDB1-211ENST00000538280 BPY2O14599 106 aa5.77□□□□□ -1.49
DDB1-211ENST00000538280 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
DDB1-211ENST00000538280 HERC1Q15751 4861 aa5.77□□□□□ -1.49
DDB1-211ENST00000538280 LRP1BQ9NZR2 4599 aa5.77□□□□□ -1.49
DDB1-211ENST00000538280 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
DDB1-211ENST00000538280 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.76□□□□□ -1.49
DDB1-211ENST00000538280 CHTF8P0CG12 524 aa5.76□□□□□ -1.49
DDB1-211ENST00000538280 KLKP1Q107X0 134 aa5.76□□□□□ -1.49
DDB1-211ENST00000538280 PHF5AQ7RTV0 110 aaKnown RBP5.76□□□□□ -1.49
DDB1-211ENST00000538280 RPS28P62857 69 aaKnown RBP5.75□□□□□ -1.49
DDB1-211ENST00000538280 PRLHP81277 87 aa5.75□□□□□ -1.49
DDB1-211ENST00000538280 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
DDB1-211ENST00000538280 C20orf197Q8N268 126 aa5.74□□□□□ -1.49
DDB1-211ENST00000538280 LINC00474Q9P2X8 69 aa5.74□□□□□ -1.49
DDB1-211ENST00000538280 F8WEM9 126 aa5.73□□□□□ -1.49
DDB1-211ENST00000538280 KRTAP13-1Q8IUC0 172 aa5.73□□□□□ -1.49
DDB1-211ENST00000538280 Q8N9L7 120 aa5.73□□□□□ -1.49
DDB1-211ENST00000538280 H7BZZ5 65 aa5.72□□□□□ -1.49
DDB1-211ENST00000538280 J3KT08 172 aa5.72□□□□□ -1.49
DDB1-211ENST00000538280 RTL8CO15255 209 aa5.72□□□□□ -1.49
DDB1-211ENST00000538280 DSCR10P59022 87 aa5.72□□□□□ -1.49
DDB1-211ENST00000538280 OCR1Q9BZK8 76 aa5.72□□□□□ -1.49
DDB1-211ENST00000538280 PANO1I0J062 215 aa5.71□□□□□ -1.5
DDB1-211ENST00000538280 SPACA4Q8TDM5 124 aa5.71□□□□□ -1.5
DDB1-211ENST00000538280 DPH3Q96FX2 82 aa5.71□□□□□ -1.5
DDB1-211ENST00000538280 HIGD2AQ9BW72 106 aa5.71□□□□□ -1.5
DDB1-211ENST00000538280 DNAH5Q8TE73 4624 aa5.71□□□□□ -1.5
DDB1-211ENST00000538280 A0A087WTM6 91 aa5.7□□□□□ -1.5
DDB1-211ENST00000538280 UBE2AP49459 152 aa5.69□□□□□ -1.5
DDB1-211ENST00000538280 Q6ZR54 194 aa5.69□□□□□ -1.5
DDB1-211ENST00000538280 FAM236DA0A1B0GTK5 79 aa5.68□□□□□ -1.5
DDB1-211ENST00000538280 NDUFC1O43677 76 aa5.68□□□□□ -1.5
DDB1-211ENST00000538280 FAM236CP0DP71 79 aa5.68□□□□□ -1.5
DDB1-211ENST00000538280 LINC00336Q6ZUF6 198 aa5.68□□□□□ -1.5
DDB1-211ENST00000538280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.68□□□□□ -1.5
DDB1-211ENST00000538280 A0A0G2JQZ4 141 aa5.67□□□□□ -1.5
DDB1-211ENST00000538280 A0A0U1RQV1 116 aa5.67□□□□□ -1.5
DDB1-211ENST00000538280 K7EQZ3 153 aa5.66□□□□□ -1.5
DDB1-211ENST00000538280 OXTP01178 125 aa5.66□□□□□ -1.5
DDB1-211ENST00000538280 TMEM254Q8TBM7 123 aa5.66□□□□□ -1.5
DDB1-211ENST00000538280 SNURFQ9Y675 71 aa5.66□□□□□ -1.5
DDB1-211ENST00000538280 A0A087WSZ3 146 aa5.65□□□□□ -1.5
DDB1-211ENST00000538280 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
DDB1-211ENST00000538280 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
DDB1-211ENST00000538280 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
DDB1-211ENST00000538280 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
DDB1-211ENST00000538280 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
DDB1-211ENST00000538280 LINC00472Q9H8W2 130 aa5.62□□□□□ -1.51
DDB1-211ENST00000538280 SERP1Q9Y6X1 66 aa5.62□□□□□ -1.51
DDB1-211ENST00000538280 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
DDB1-211ENST00000538280 ZCCHC13Q8WW36 166 aaKnown RBP5.61□□□□□ -1.51
DDB1-211ENST00000538280 FAM30AQ9NZY2 134 aa5.61□□□□□ -1.51
DDB1-211ENST00000538280 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
DDB1-211ENST00000538280 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
DDB1-211ENST00000538280 FAT1Q14517 4588 aa5.6□□□□□ -1.51
DDB1-211ENST00000538280 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
DDB1-211ENST00000538280 A8MWP4 228 aa5.58□□□□□ -1.52
DDB1-211ENST00000538280 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
DDB1-211ENST00000538280 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
DDB1-211ENST00000538280 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
DDB1-211ENST00000538280 DEFB116Q30KQ4 102 aa5.57□□□□□ -1.52
DDB1-211ENST00000538280 C5orf47Q569G3 176 aa5.57□□□□□ -1.52
DDB1-211ENST00000538280 C1orf134Q5TEV5 83 aa5.57□□□□□ -1.52
DDB1-211ENST00000538280 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
DDB1-211ENST00000538280 ZNF861PO60384 105 aa5.56□□□□□ -1.52
DDB1-211ENST00000538280 CDK2AP2O75956 126 aa5.56□□□□□ -1.52
DDB1-211ENST00000538280 Q5XG85 94 aa5.56□□□□□ -1.52
DDB1-211ENST00000538280 Q96NJ1 140 aa5.56□□□□□ -1.52
DDB1-211ENST00000538280 Q8N1X5 172 aa5.55□□□□□ -1.52
DDB1-211ENST00000538280 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
DDB1-211ENST00000538280 MMP24-AS1A0A0U1RRL7 71 aa5.54□□□□□ -1.52
DDB1-211ENST00000538280 WFDC13Q8IUB5 93 aa5.54□□□□□ -1.52
DDB1-211ENST00000538280 DNAH8Q96JB1 4490 aa5.54□□□□□ -1.52
DDB1-211ENST00000538280 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
DDB1-211ENST00000538280 CASC2Q6XLA1 102 aa5.53□□□□□ -1.52
DDB1-211ENST00000538280 IGLV9-49A0A0B4J1Y8 123 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms