RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 PANO1I0J062 215 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 NCR3O14931 201 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 NDUFC2O95298 119 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
SNHG1-208ENST00000538266 FAM19A5Q7Z5A7 132 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-208ENST00000538266 NKAPP1Q8N9T2 125 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 CIRBP-AS1Q8TBR5 109 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 C7orf33Q8WU49 177 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 LINC00846Q9NV44 126 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 PLAC8Q9NZF1 115 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 H3BQ85 93 aa2.7□□□□□ -1.98
SNHG1-208ENST00000538266 TMEM256-PLSCR3K7ERE1 68 aa2.7□□□□□ -1.98
SNHG1-208ENST00000538266 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-208ENST00000538266 C5orf47Q569G3 176 aa2.7□□□□□ -1.98
SNHG1-208ENST00000538266 C9orf129Q5T035 196 aaKnown RBP2.7□□□□□ -1.98
SNHG1-208ENST00000538266 UBL5Q9BZL1 73 aa2.7□□□□□ -1.98
SNHG1-208ENST00000538266 DNAH7Q8WXX0 4024 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 A0A087WVE0 104 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 TRBV10-3A0A0K0K1G6 114 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 A0A1W2PNN7 141 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 FAM168BA1KXE4 195 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 BCE1O60756 84 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 SMR3BP02814 79 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-208ENST00000538266 UBE2BP63146 152 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 MRPL55Q7Z7F7 128 aaKnown RBP2.69□□□□□ -1.98
SNHG1-208ENST00000538266 STARD9Q9P2P6 4700 aa2.69□□□□□ -1.98
SNHG1-208ENST00000538266 LOC110117498A0A087WWA1 95 aa2.68□□□□□ -1.98
SNHG1-208ENST00000538266 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
SNHG1-208ENST00000538266 EPM2AB3EWF7 344 aa2.68□□□□□ -1.98
SNHG1-208ENST00000538266 PDE6GP18545 87 aa2.68□□□□□ -1.98
SNHG1-208ENST00000538266 RPL37AP61513 92 aaKnown RBP2.68□□□□□ -1.98
SNHG1-208ENST00000538266 Q5VSD8 79 aa2.68□□□□□ -1.98
SNHG1-208ENST00000538266 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
SNHG1-208ENST00000538266 LYSTQ99698 3801 aa2.68□□□□□ -1.98
SNHG1-208ENST00000538266 FAM236DA0A1B0GTK5 79 aa2.67□□□□□ -1.98
SNHG1-208ENST00000538266 FAM236CP0DP71 79 aa2.67□□□□□ -1.98
SNHG1-208ENST00000538266 Q6ZQT0 140 aa2.67□□□□□ -1.98
SNHG1-208ENST00000538266 PHF5AQ7RTV0 110 aaKnown RBP2.67□□□□□ -1.98
SNHG1-208ENST00000538266 CYSTM1Q9H1C7 97 aa2.67□□□□□ -1.98
SNHG1-208ENST00000538266 TRAV7A0A075B6U4 112 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 TRAV23DV6A0A075B6W5 121 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 RPL37AP8A6NKH3 93 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 M0R378 163 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 PRR3P79522 188 aaKnown RBP2.66□□□□□ -1.98
SNHG1-208ENST00000538266 RBM3P98179 157 aaKnown RBP2.66□□□□□ -1.98
SNHG1-208ENST00000538266 C6orf99Q4VX62 202 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 C1orf137Q5JT78 98 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 LINC00575Q6W349 94 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 DSCR8Q96T75 97 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 LAMTOR3Q9UHA4 124 aa2.66□□□□□ -1.98
SNHG1-208ENST00000538266 IGLV6-57P01721 117 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 ATP5EP56381 51 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-208ENST00000538266 CXCL6P80162 114 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 REG3GQ6UW15 175 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 FAM19A1Q7Z5A9 133 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 C20orf197Q8N268 126 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 DIRC1Q969H9 104 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 PSORS1C2Q9UIG4 136 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 KMT2AQ03164 3969 aa2.65□□□□□ -1.99
SNHG1-208ENST00000538266 IGLV1-50A0A075B6I6 118 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 TRBV7-6A0A0J9YX20 115 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 NDUFC1O43677 76 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 UBE2AP49459 152 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-208ENST00000538266 Q6ZVQ6 151 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 Q8NDZ9 215 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 SERP1Q9Y6X1 66 aa2.64□□□□□ -1.99
SNHG1-208ENST00000538266 ETDCA0A1B0GVM5 59 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 OXTP01178 125 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 IGLV7-43P04211 117 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 COX7BP24311 80 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 KLKP1Q107X0 134 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 Q6ZQY7 126 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 KRTAP11-1Q8IUC1 163 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 Q8NBF4 154 aa2.63□□□□□ -1.99
SNHG1-208ENST00000538266 DYNC2H1Q8NCM8 4307 aaKnown RBP2.62□□□□□ -1.99
SNHG1-208ENST00000538266 TRBV7-4A0A0J9YYF1 115 aa2.62□□□□□ -1.99
SNHG1-208ENST00000538266 H7BZZ5 65 aa2.62□□□□□ -1.99
SNHG1-208ENST00000538266 ZNF73O43830 326 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-208ENST00000538266 ERC2-IT1O76042 136 aa2.62□□□□□ -1.99
SNHG1-208ENST00000538266 ELOF1P60002 83 aaKnown RBP2.62□□□□□ -1.99
SNHG1-208ENST00000538266 PRLHP81277 87 aa2.62□□□□□ -1.99
SNHG1-208ENST00000538266 Q5XG85 94 aa2.62□□□□□ -1.99
SNHG1-208ENST00000538266 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
SNHG1-208ENST00000538266 KCNQ1DNQ9H478 68 aa2.62□□□□□ -1.99
SNHG1-208ENST00000538266 ZNF861PO60384 105 aa2.61□□□□□ -1.99
SNHG1-208ENST00000538266 KRTAP10-4P60372 401 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-208ENST00000538266 NREPQ16612 68 aa2.61□□□□□ -1.99
SNHG1-208ENST00000538266 Q6ZRX8 168 aa2.61□□□□□ -1.99
SNHG1-208ENST00000538266 HIGD2AQ9BW72 106 aa2.61□□□□□ -1.99
SNHG1-208ENST00000538266 KMT2CQ8NEZ4 4911 aaKnown RBP2.61□□□□□ -1.99
SNHG1-208ENST00000538266 DNAH1Q9P2D7 4330 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 SMIM26A0A096LP01 95 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 F8WEM9 126 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 H0Y9J4 135 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 SPRR1AP35321 89 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 C4orf26Q17RF5 130 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms