RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 DNAH3Q8TD57 4116 aa11.47□□□□□ -0.57
RAB40C-203ENST00000535977 A0A1W2PNM2 257 aa11.45□□□□□ -0.58
RAB40C-203ENST00000535977 C16orf90A8MZG2 172 aa11.45□□□□□ -0.58
RAB40C-203ENST00000535977 CHKB-CPT1BH3BT56 60 aa11.45□□□□□ -0.58
RAB40C-203ENST00000535977 DSCR10P59022 87 aa11.45□□□□□ -0.58
RAB40C-203ENST00000535977 RPL37AP8A6NKH3 93 aa11.44□□□□□ -0.58
RAB40C-203ENST00000535977 K7EQZ3 153 aa11.44□□□□□ -0.58
RAB40C-203ENST00000535977 UBE2AP49459 152 aa11.44□□□□□ -0.58
RAB40C-203ENST00000535977 FAM168BA1KXE4 195 aa11.43□□□□□ -0.58
RAB40C-203ENST00000535977 Q9BRP9 147 aa11.42□□□□□ -0.58
RAB40C-203ENST00000535977 SPTSSBQ8NFR3 76 aa11.42□□□□□ -0.58
RAB40C-203ENST00000535977 KRTAP7-1Q8IUC3 87 aa11.4□□□□□ -0.58
RAB40C-203ENST00000535977 B9D2Q9BPU9 175 aa11.4□□□□□ -0.58
RAB40C-203ENST00000535977 NDUFB1O75438 58 aa11.4□□□□□ -0.58
RAB40C-203ENST00000535977 Q8N9P0 234 aaPredicted RBP11.39□□□□□ -0.59
RAB40C-203ENST00000535977 PRR15LQ9BU68 103 aa11.38□□□□□ -0.59
RAB40C-203ENST00000535977 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
RAB40C-203ENST00000535977 CNBPP62633 177 aaKnown RBP11.37□□□□□ -0.59
RAB40C-203ENST00000535977 REG3GQ6UW15 175 aa11.37□□□□□ -0.59
RAB40C-203ENST00000535977 MEGF8Q7Z7M0 2845 aa11.37□□□□□ -0.59
RAB40C-203ENST00000535977 TNP2Q05952 138 aa11.37□□□□□ -0.59
RAB40C-203ENST00000535977 C1orf137Q5JT78 98 aa11.37□□□□□ -0.59
RAB40C-203ENST00000535977 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
RAB40C-203ENST00000535977 LCA10Q71F78 164 aa11.35□□□□□ -0.59
RAB40C-203ENST00000535977 Q8NBF4 154 aa11.35□□□□□ -0.59
RAB40C-203ENST00000535977 LIMD2Q9BT23 127 aa11.35□□□□□ -0.59
RAB40C-203ENST00000535977 DEFB116Q30KQ4 102 aa11.33□□□□□ -0.6
RAB40C-203ENST00000535977 ATP11AUNQ6ZP68 121 aa11.32□□□□□ -0.6
RAB40C-203ENST00000535977 LINC00208Q96KT6 92 aa11.32□□□□□ -0.6
RAB40C-203ENST00000535977 UBE2DNLQ8IWF7 75 aa11.32□□□□□ -0.6
RAB40C-203ENST00000535977 MP68P56378 58 aa11.31□□□□□ -0.6
RAB40C-203ENST00000535977 SPRR4Q96PI1 79 aa11.3□□□□□ -0.6
RAB40C-203ENST00000535977 APLNQ9ULZ1 77 aa11.3□□□□□ -0.6
RAB40C-203ENST00000535977 A6NN06 94 aa11.3□□□□□ -0.6
RAB40C-203ENST00000535977 NDUFS5O43920 106 aa11.29□□□□□ -0.6
RAB40C-203ENST00000535977 WFDC13Q8IUB5 93 aa11.29□□□□□ -0.6
RAB40C-203ENST00000535977 KRTAP1-5Q9BYS1 174 aa11.29□□□□□ -0.6
RAB40C-203ENST00000535977 A0A096LNI7 61 aa11.28□□□□□ -0.6
RAB40C-203ENST00000535977 A6NED7 52 aa11.28□□□□□ -0.6
RAB40C-203ENST00000535977 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.61
RAB40C-203ENST00000535977 Q75L30 129 aa11.26□□□□□ -0.61
RAB40C-203ENST00000535977 PRKDCP78527 4128 aaKnown RBP11.26□□□□□ -0.61
RAB40C-203ENST00000535977 TGP01266 2768 aa11.25□□□□□ -0.61
RAB40C-203ENST00000535977 SPANXA2-OT1Q8N9U9 137 aa11.25□□□□□ -0.61
RAB40C-203ENST00000535977 FBN3Q75N90 2809 aa11.25□□□□□ -0.61
RAB40C-203ENST00000535977 A0A1W2PNN7 141 aa11.23□□□□□ -0.61
RAB40C-203ENST00000535977 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
RAB40C-203ENST00000535977 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
RAB40C-203ENST00000535977 DNAH1Q9P2D7 4330 aa11.22□□□□□ -0.61
RAB40C-203ENST00000535977 IGLV8-61A0A075B6I0 122 aa11.2□□□□□ -0.62
RAB40C-203ENST00000535977 LOC101927531A0A1B0GV80 90 aa11.2□□□□□ -0.62
RAB40C-203ENST00000535977 H0Y9J4 135 aa11.2□□□□□ -0.62
RAB40C-203ENST00000535977 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
RAB40C-203ENST00000535977 H0Y9P7 68 aa11.2□□□□□ -0.62
RAB40C-203ENST00000535977 LINC00476Q8WZB0 136 aa11.2□□□□□ -0.62
RAB40C-203ENST00000535977 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
RAB40C-203ENST00000535977 CDC42SE1Q9NRR8 79 aa11.18□□□□□ -0.62
RAB40C-203ENST00000535977 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
RAB40C-203ENST00000535977 NUPR2A6NF83 97 aa11.17□□□□□ -0.62
RAB40C-203ENST00000535977 C7orf65Q6ZTY9 151 aa11.17□□□□□ -0.62
RAB40C-203ENST00000535977 PRLHP81277 87 aa11.16□□□□□ -0.62
RAB40C-203ENST00000535977 COA5Q86WW8 74 aa11.15□□□□□ -0.62
RAB40C-203ENST00000535977 NBDYA0A0U1RRE5 68 aa11.14□□□□□ -0.63
RAB40C-203ENST00000535977 KRTAP29-1A8MX34 341 aaPredicted RBP11.14□□□□□ -0.63
RAB40C-203ENST00000535977 RPL37AP61513 92 aaKnown RBP11.14□□□□□ -0.63
RAB40C-203ENST00000535977 IGFL1Q6UW32 110 aa11.14□□□□□ -0.63
RAB40C-203ENST00000535977 MOBPQ13875 183 aa11.13□□□□□ -0.63
RAB40C-203ENST00000535977 SPRR1BP22528 89 aa11.13□□□□□ -0.63
RAB40C-203ENST00000535977 H3BPC8 53 aa11.12□□□□□ -0.63
RAB40C-203ENST00000535977 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
RAB40C-203ENST00000535977 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
RAB40C-203ENST00000535977 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
RAB40C-203ENST00000535977 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
RAB40C-203ENST00000535977 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
RAB40C-203ENST00000535977 A0A087WSZ3 146 aa11.08□□□□□ -0.64
RAB40C-203ENST00000535977 Q6ZRN7 208 aaPredicted RBP11.06□□□□□ -0.64
RAB40C-203ENST00000535977 C8orf87E5RJ46 101 aa11.05□□□□□ -0.64
RAB40C-203ENST00000535977 SPAG11AQ6PDA7 123 aa11.04□□□□□ -0.64
RAB40C-203ENST00000535977 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
RAB40C-203ENST00000535977 IGLV7-46A0A075B6I9 117 aa11.03□□□□□ -0.64
RAB40C-203ENST00000535977 LINC01558Q9Y6Z2 57 aa11.03□□□□□ -0.64
RAB40C-203ENST00000535977 SPINK7P58062 85 aa11.01□□□□□ -0.65
RAB40C-203ENST00000535977 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
RAB40C-203ENST00000535977 KRTAP13-1Q8IUC0 172 aa10.98□□□□□ -0.65
RAB40C-203ENST00000535977 DYNC2H1Q8NCM8 4307 aaKnown RBP10.97□□□□□ -0.65
RAB40C-203ENST00000535977 PCOTHQ58A44 107 aa10.97□□□□□ -0.65
RAB40C-203ENST00000535977 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
RAB40C-203ENST00000535977 A0A087WTM6 91 aa10.93□□□□□ -0.66
RAB40C-203ENST00000535977 A8MWP4 228 aa10.92□□□□□ -0.66
RAB40C-203ENST00000535977 PANO1I0J062 215 aa10.92□□□□□ -0.66
RAB40C-203ENST00000535977 LINC00313P59037 77 aa10.92□□□□□ -0.66
RAB40C-203ENST00000535977 PRAC1Q96KF2 57 aa10.92□□□□□ -0.66
RAB40C-203ENST00000535977 LINC00472Q9H8W2 130 aa10.9□□□□□ -0.66
RAB40C-203ENST00000535977 DNAH10Q8IVF4 4471 aa10.89□□□□□ -0.67
RAB40C-203ENST00000535977 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.89□□□□□ -0.67
RAB40C-203ENST00000535977 ZNF706Q9Y5V0 76 aaPredicted RBP10.88□□□□□ -0.67
RAB40C-203ENST00000535977 TENM2Q9NT68 2774 aa10.88□□□□□ -0.67
RAB40C-203ENST00000535977 LINC00483Q53H64 154 aa10.86□□□□□ -0.67
RAB40C-203ENST00000535977 MMP24-AS1A0A0U1RRL7 71 aa10.86□□□□□ -0.67
RAB40C-203ENST00000535977 CSMD3Q7Z407 3707 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms